Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02587 GGAAAATTAGGGAGAGAGGGAGAGAGGGAGAGAGAGAAGAGTGGTGAGGGGTAAAATGAAGGTCAAGTAATGTTATCAAAGCCCTTAGGCATTGCCTTGAGAAGCAAAAGCATCAAAATTTTAATAAAATATTTATTGAATTCCATTTATTTTATACCTATATAAATAAAGTACTTTGTTATGTTATTGGTGTTTTCATTTATCATTTTTTTTAAAAAATCTCTCTATCTCTTTTCATTTCAATTTTTGTTCAAACCCAAAACACACAGATCCAAATCCAAATCCAAATCCAAATCCCCCATATGTACCAATCAACTTCTTCCTCTTCTTCTTCTCAGAAATCCATGCCCTCCGCCCACGCCGGCGCCGGTCTCGGCGGCGGTGGTAGTGGTGGTGGTGGTGGTCTTACTCGGTACGGTTCCGCGCCTGGATCTCTCCTGACCACGGCGGTCGATTCCGTGATTGGGAGTCGGCAACCGGACTCCGCCGCCACGCTCCGTGGGCCACCATCGTTCGGCGGCCACTACTTCTCCTCTGTTGATTCCTCCGTCGTGGAGTCCTCAAGGAAGGTTGTTCAGTCGTCGTCTACTTCCAACGATCTGAAATCGTCGTCGTCTACTACCGCCGCCGCCGCCGCCGCCGCCGCCTTGAATAGGTCGTACGGATTCAACGATTTGGCGTTAGGGGATTTCTCGACGGGTAGAAATTTCAATAGTAATGGTGGTCAATCCTCTTCCTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCTGGATTTCTCGGCCATCTCTCCGTCGCCGAACCAAACGGAGGGTTTTCATTGACAATGGGAGGTGGTGGAAATGGAATAGGAAGACTAAAATCCCAAATGAGCTTCAATGGGCAAGATAATTCACTTTCTCAAATCTCAGAAATGAGTGAAAGTTTTGTTGAGGCAGCCAATTCTTGTAGCAATGGCCTTCAAAGCAACACCAATTCCACACATTCCTTTGGCCCCTCTGCCTTTGCTATGGACTCTTCTTGGGAAACATCCAATAATTCCATTGTCTTTGGTGCCCCTCATGCTAAAAGATCTAAGCACCATTCCGATGCCGACTTCTTCACCAGCCTCGAGTCTCAAGTACGTATCCTGCCACAAACAACCCTAGAAATGGCAGCTGTGGAGAGGCTGCTTCAAATTCCGGAAGACTCTGTTCCTTGTAAGATTCGAGCCAAGCGTGGATGTGCTACTCATCCTCGGAGTATCGCCGAACGGGAGAGGAGAACTAGAATCAGCGGAAAATTGAAAAAACTTCAAGAACTTGTTCCCAACATGGATAAGCAAACAAGCTATTCAGACATGTTGGACTTAGCAGTGCAGCATATTAAAGGTCTTCAAAATCAAATTCAGAAGCTTAACAAAGAAGTTGAAAATTGCACCTGTGGAAGCAAAGAATGCTTATAACATCTGGAATTATTGGGAGTTGGAAACATGAATTCTACCTCAAATTTTGCCTTTTTTAAAAAAATTTATTGTGTTCTTTCCACTAACCCAAAAAATTAAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGGAAAGACAAAAGAAAACAAGAGTAAAGGGCATTAGTTTGTACATAATGGAAGTAGCTCTCCAGCTCTTATTAATTCCCAAATTTTAATTGGAATTTCATAAGCTTAATTCTTCTTTTTTTTTTTTTTTCCATGTAAAATAATTTTTGAATTCTTCTGTTTGGTTCCCTACTATTTTTGTTTGCTTTGTCTTTGTAATATTTGAGAAACCTATATCCTTGACTCTTTAATTTCATTATTCATGATTGTCTTTTTAGAGAAA 1847 41.53 MYQSTSSSSSSQKSMPSAHAGAGLGGGGSGGGGGLTRYGSAPGSLLTTAVDSVIGSRQPDSAATLRGPPSFGGHYFSSVDSSVVESSRKVVQSSSTSNDLKSSSSTTAAAAAAAALNRSYGFNDLALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGNGIGRLKSQMSFNGQDNSLSQISEMSESFVEAANSCSNGLQSNTNSTHSFGPSAFAMDSSWETSNNSIVFGAPHAKRSKHHSDADFFTSLESQVRILPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKECL 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63578046 63587535 - XM_039043890.1 Bhi01g02587 25360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02587 380 Coils Coil 348 375 - -
Bhi01g02587 380 Gene3D - 309 377 IPR036638 GO:0046983
Bhi01g02587 380 CDD bHLH_AtbHLH_like 313 365 IPR045239 -
Bhi01g02587 380 MobiDBLite consensus disorder prediction 1 41 - -
Bhi01g02587 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 372 IPR036638 GO:0046983
Bhi01g02587 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 308 358 IPR011598 GO:0046983
Bhi01g02587 380 SMART finulus 314 364 IPR011598 GO:0046983
Bhi01g02587 380 Coils Coil 379 380 - -
Bhi01g02587 380 PANTHER TRANSCRIPTION FACTOR BHLH129 34 373 - -
Bhi01g02587 380 MobiDBLite consensus disorder prediction 1 17 - -
Bhi01g02587 380 Pfam Helix-loop-helix DNA-binding domain 313 359 IPR011598 GO:0046983
Bhi01g02587 380 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 34 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02587 Bhi-Chr1:63578046 Bhi02g01568 Bhi-Chr2:43523117 2.12E-43 dispersed
Bhi01g02587 Bhi-Chr1:63578046 Bhi01g02588 Bhi-Chr1:63578046 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
252 PF00010 HLH 1.00E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02587 - - bhj:120087044 634.795