Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02588 AATTAGGGAGAGAGGGAGAGAGGGAGAGAGAGAAGAGTGGTGAGGGGTAAAATGAAGGTCAAGTAATGTTATCAAAGCCCTTAGGCATTGCCTTGAGAAGCAAAAGCATCAAAATTTTAATAAAATATTTATTGAATTCCATTTATTTTATACCTATATAAATAAAGTACTTTGTTATGTTATTGGTGTTTTCATTTATCATTTTTTTTAAAAAATCTCTCTATCTCTTTTCATTTCAATTTTTGTTCAAACCCAAAACACACAGATCCAAATCCAAATCCAAATCCAAATCCCCCATATGTACCAATCAACTTCTTCCTCTTCTTCTTCTCAGAAATCCATGCCCTCCGCCCACGCCGGCGCCGGTCTCGGCGGCGGTGGTAGTGGTGGTGGTGGTGGTCTTACTCGGTACGGTTCCGCGCCTGGATCTCTCCTGACCACGGCGGTCGATTCCGTGATTGGGAGTCGGCAACCGGACTCCGCCGCCACGCTCCGTGGGCCACCATCGTTCGGCGGCCACTACTTCTCCTCTGTTGATTCCTCCGTCGTGGAGTCCTCAAGGAAGGTTGTTCAGTCGTCGTCTACTTCCAACGATCTGAAATCGTCGTCGTCTACTACCGCCGCCGCCGCCGCCGCCGCCGCCTTGAATAGGTCGTACGGATTCAACGATTTGGCGTTAGGGGATTTCTCGACGGGTAGAAATTTCAATAGTAATGGTGGTCAATCCTCTTCCTCTTCGCCGTTGGTTCGCCAGAGAAGCTCGCCGGCTGGATTTCTCGGCCATCTCTCCGTCGCCGAACCAAACGGAGGGTTTTCATTGACAATGGGAGGTGGTGGAAATGGAATAGGAAGACTAAAATCCCAAATGAGCTTCAATGGGCAAGATAATTCACTTTCTCAAATCTCAGAAATGAGTGAAAGTTTTGTTGAGGCAGCCAATTCTTGTAGCAATGGCCTTCAAAGCAACACCAATTCCACACATTCCTTTGGCCCCTCTGCCTTTGCTATGGACTCTTCTTGGGAAACATCCAATAATTCCATTGTCTTTGGTGCCCCTCATGCTAAAAGATCTAAGCACCATTCCGATGCCGACTTCTTCACCAGCCTCGAGTCTCAATTTAGCCTGCCACAAACAACCCTAGAAATGGCAGCTGTGGAGAGGCTGCTTCAAATTCCGGAAGACTCTGTTCCTTGTAAGATTCGAGCCAAGCGTGGATGTGCTACTCATCCTCGGAGTATCGCCGAACGGGAGAGGAGAACTAGAATCAGCGGAAAATTGAAAAAACTTCAAGAACTTGTTCCCAACATGGATAAGCAAACAAGCTATTCAGACATGTTGGACTTAGCAGTGCAGCATATTAAAGGTCTTCAAAATCAAATTCAGAAGCTTAACAAAGAAGTTGAAAATTGCACCTGTGGAAGCAAAGAATGCTTATAACATCTGGAATTATTGGGAGTTGGAAACATGAATTCTACCTCAAATTTTGCCTTTTTTAAAAAAATTTATTGTGTTCTTTCCACTAACCCAAAAAATTAAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAGGAAAGACAAAAGAAAACAAGAGTAAAGGGCATTAGTTTGTACATAATGGAAGTAGCTCTCCAGCTCTTATTAATTCCCAAATTTTAATTGGAATTTCATAAGCTTAATTCTTCTTTTTTTTTTTTTTTCCATGTAAAATAATTTTTGAATTCTTCTGTTTGGTTCCCTACTATTTTTGTTTGCTTTGTCTTTGTAATATTTGAGAAACCTATATCCTTGACTCTTTAATTTCATTATTCATGATTGTCTTTTTAGAGAAA 1840 41.47 MYQSTSSSSSSQKSMPSAHAGAGLGGGGSGGGGGLTRYGSAPGSLLTTAVDSVIGSRQPDSAATLRGPPSFGGHYFSSVDSSVVESSRKVVQSSSTSNDLKSSSSTTAAAAAAAALNRSYGFNDLALGDFSTGRNFNSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGNGIGRLKSQMSFNGQDNSLSQISEMSESFVEAANSCSNGLQSNTNSTHSFGPSAFAMDSSWETSNNSIVFGAPHAKRSKHHSDADFFTSLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKECL 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63578046 63587531 - XM_039043898.1 Bhi01g02588 25361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02588 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 310 371 IPR036638 GO:0046983
Bhi01g02588 379 MobiDBLite consensus disorder prediction 1 41 - -
Bhi01g02588 379 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 34 372 - -
Bhi01g02588 379 Gene3D - 308 376 IPR036638 GO:0046983
Bhi01g02588 379 SMART finulus 313 363 IPR011598 GO:0046983
Bhi01g02588 379 Coils Coil 347 374 - -
Bhi01g02588 379 CDD bHLH_AtbHLH_like 312 364 IPR045239 -
Bhi01g02588 379 MobiDBLite consensus disorder prediction 1 17 - -
Bhi01g02588 379 PANTHER TRANSCRIPTION FACTOR BHLH129 34 372 - -
Bhi01g02588 379 Pfam Helix-loop-helix DNA-binding domain 312 358 IPR011598 GO:0046983
Bhi01g02588 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 357 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02588 Bhi-Chr1:63578046 Bhi02g01568 Bhi-Chr2:43523117 8.86E-45 dispersed
Bhi01g02587 Bhi-Chr1:63578046 Bhi01g02588 Bhi-Chr1:63578046 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
253 PF00010 HLH 1.00E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02588 - - bhj:120087044 624.394