Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02592 CGAGTCCGCGCGCCACTGGCAATAGAAGTCCTCAGTAGAGAACAGAAGAGGGGTTCGCAGAACCCCTAAATAAGCCTCACCATGGCTGATTCCCGAGCAGGCATCGTCAAAAGTATCCGCTTAGAGAACTTCATGTGTCACAGCAACTTGTATATTGAATTTGGCGAGTGGCTCAATTTCATTACTGGGCAGAACGGAAGTGGTAAGAGTGCTATACTGACTGCTTTATGTGTTGCATTCGGCTGCCGAGCTAAAGGAACCCAAAGGGCAGCGACGTTGAAGGATTTTATTAAAACTGGTTGCAGTCATGCTGTCATTCATGTTGTATTGCAAAATAATGGGGAGGATGCTTTCAAGCATGGAATATATGGTGATGCTATAATCATAGAAAGAAGGATATCGGAAGCCACCAGTGCCATTGTTTTGAAGGATTCTCATGGAAAAAAGGTTGCCAGTCGGAGGGATGAACTACGAGAGCTAGTAGAACATTTTAATATAGATGTTGAGAATCCATGTGTAATAATGAGTCAGGACAAAAGTAGAGAGTTCCTGCATTCTGGGAATGACAAAGACAAATTTAAGTTCTTCTTCAAGGCAACTCTTCTTCAGCAAGTGGACGATCTGCTGAAAAACATTTTTGATCAATTGAGATCTGCGAATGCACTTGTTGGTGACTTGGAATCTACCATACGACCTGTAGAAAAGGAACTAAATGAGCTGCGAGGAAAAATTAAAAACATGGAGCATGTGGAAGAAATCTCTCAACAAGTCCAGCAATTAAAGAAAAAGCTTGCTTGGTCATGGGTATATGATGTAGACAAGCAGCTTCAGGAGCAAAGTGCAAAAATAGGAAAGCTCCAAGATCGCATTCCTATTTGTCGAGCAAAAATTGATCATCAACTGGGTCTGGCAGAAAAATTAAGAGAACGCTTTATTGAGAAAAAGACTCAAATTGCAAGCATGATGGAGAGAACTTCAGAAGTGAGAAGAATGAAGGATGAACTGCAGGAAACTCTTTCCTTGGCAACAAGAGAGAAGCTCGGACTTGAAGAGGAGCATGGCCGTAAAGTAAACTACATCCAAAAGATGGTAAAGCGTGTTAGGCTGCTTGAGCAACAAGTTCAAGATATTCATGAGCAGCACATTAGAAATACACAGGCTGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTTGAATCGGAGACTGAAGCTGCTAAGTCAACAGTAATGAGGTTAAAAGAGGAGGAGAATGCCTTAATGGAGAGTCTATACAGTGGGAGAAATGAAATAAAAAAGATTGCTGAAGAGATTGAAAGTTATGAGAAAAAGCATTATGAATTTTCTCACTCAATTCGAGAGCTAAGGCAGCATCAAACCAACAAGGTCACAGCTTTTGGAGGTGATAGAGTCATTCAATTATTACGTGCAATTGAGAGACAACATAAAAGATTCAAGAAACCTCCCATTGGTCCAATTGGTTCCCATCTGAATTTGGTCAATGGTGACATGTGGGCTCCTGCTGTTGAAAGTGCCATTGGGAGGTTGCTCAATGCTTTCATTGTGACTGATCACCAAGATTCTCTTCTTTTGAGAAGATGTGCAAATGAAGCTAATTATAGGCAACTCCCAATTATCATCTATGACTTTTCAAGACCAGTGTTAAATATTCCAGCTCACATGCTTCCTCAAACAAAGCACCCGACAACCCTTTCAGTCGTTCATTCTGAAAACCATACTGTCATCAATGTTTTGATAGATAAGGGTGATGCTGAGAGGCAAGTGCTTGTTAAAGATTATGATGTGGGTAAATCAGTAGCATTTGACCAACGTATCTCAAACCTCAAGGAGGTCTTTACATTAGATGGATACAAAATGTTTTCTCGAGGTTCTGTTCAGACAATTCTTCCCCCAGTTAGAAGACCCAGAAGTGGCAGACTTTGTAGTTCCTTTGAAGACCAAATTAAAAGTCTTGAAAAAGATGCATTGAATGTAAAGCAAGAAGCTGAACAATGTAGGAAGAGGAAGAGACTTTCAGAAGAACAACTCCGGGATCTTGAAGACAACCTAAGCAATGCGAAGAGGAAGTGTCGGAGTGCGGAACGGTTTTTTATGTCCAAAAATTTGGAGCTGCAAGATTTACGGAAGTCTCAAGTTGCTGAGGCTAGTTCATTGCCTTCATCAAATGTGGATGAGCTTCATCAAGAAATTTCTAAAATTGAAGAGGAGATACAAGAGAATAAGTTGCTTCTGGAAAAGTTTCAAGTTAGGATGAAAGAAGCGGAAGCAAAGGCAAAAGATCTTAAAGTATCATTTGAGAATCTCTGTGAGTCAGCAAAAGGAGAAATTGATGCATTTGAAGAAGCTGAGAGAGATATGTTGCAGATTGAACGAGAACTGCATTCTGCAGAAAAGGAGAAGGATCATTATGAAGGTATTATGACTAACAAGGTCCTTTTTGATATTAAAGAGGCAGAGAGACAATATGAGGAGTTTGAGCGCCATCGTAAGGAGAGCTACAGTAAGGCTTCAATAATATGTCCTGAGAGTGAAATTGAGGCTTTAGGTGATTGGGATGGGAGCACACCTGAACAACTCAGTGCACAATTAACAAGGCTAAATCAGAGACTTAATAACGAGACCAGACGATGTTCTGAATCTCTTGAAGACCTGAGGATGATGTATGAGAAAAAGGAGCGTACAATTATAAGAAAACAACAGACTTATAAAAGTTTTAGAGAGAAGTTGGATGCTTGCCAGAAAGCTCTTGAGCAACGGTGGAACAAGTTTGAAAGGAATGCTAGTCTTTTGAAGCGCCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAAGGGATCAGCGGACATATAAAAGTTAATTACGAGGAAAAGACCCTCTCAGTTGAGGTGAAGATGCCCCAAGATGCATCCAGCAGTTCTGTTCGTGATACCCGTGGACTTTCAGGTGGAGAACGATCATTTTCAACACTATGCTTTGCTTTGGCGTTACACGATATGACTGAAGCCCCATTTCGAGCAATGGATGAATTTGATGTGTTTATGGACGCTGTAAGTCGGAAAATTAGCTTGGACACTCTTGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATATTTATAACGCCGCATGATATTGGCATGGTAAAACAAGGAGAACGAATCAAGAAGCAGCAAATGGCAGCTCCTTGATCATGATGTTCTTGCTGGTGAGAGCTCAATCTGTTCAACGATTTCTGTATGATTCCCATCTTTTTTTGTTCCAATATATTTTCAACTTATTCATCCTTCTGGATAATTTACCATCTTTTATGTATATTCTCCATATTCAAACCAATTGTAGAATTAACGGTCATATCTATGAGAAAGTAGAGAAGGACAATTAATAGGTGAAAGGCAAAGAAACGCTCTTTTTGTATAGGCTTAATGTATGATGTACTCAACATGGTTATAATAGAAGTAGCTATTTCGGGAAA 3497 40.03 MADSRAGIVKSIRLENFMCHSNLYIEFGEWLNFITGQNGSGKSAILTALCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGDAIIIERRISEATSAIVLKDSHGKKVASRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFDQLRSANALVGDLESTIRPVEKELNELRGKIKNMEHVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLAEKLRERFIEKKTQIASMMERTSEVRRMKDELQETLSLATREKLGLEEEHGRKVNYIQKMVKRVRLLEQQVQDIHEQHIRNTQAEESEIEEKLKELESETEAAKSTVMRLKEEENALMESLYSGRNEIKKIAEEIESYEKKHYEFSHSIRELRQHQTNKVTAFGGDRVIQLLRAIERQHKRFKKPPIGPIGSHLNLVNGDMWAPAVESAIGRLLNAFIVTDHQDSLLLRRCANEANYRQLPIIIYDFSRPVLNIPAHMLPQTKHPTTLSVVHSENHTVINVLIDKGDAERQVLVKDYDVGKSVAFDQRISNLKEVFTLDGYKMFSRGSVQTILPPVRRPRSGRLCSSFEDQIKSLEKDALNVKQEAEQCRKRKRLSEEQLRDLEDNLSNAKRKCRSAERFFMSKNLELQDLRKSQVAEASSLPSSNVDELHQEISKIEEEIQENKLLLEKFQVRMKEAEAKAKDLKVSFENLCESAKGEIDAFEEAERDMLQIERELHSAEKEKDHYEGIMTNKVLFDIKEAERQYEEFERHRKESYSKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKQQTYKSFREKLDACQKALEQRWNKFERNASLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALAQGSQWIFITPHDIGMVKQGERIKKQQMAAP 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63949951 63986690 - XM_039038913.1 Bhi01g02592 25365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02592 1043 Coils Coil 703 786 - -
Bhi01g02592 1043 Coils Coil 621 676 - -
Bhi01g02592 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 1035 IPR027417 -
Bhi01g02592 1043 Coils Coil 843 881 - -
Bhi01g02592 1043 CDD ABC_SMC6_euk 9 161 - -
Bhi01g02592 1043 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 4 1043 - -
Bhi01g02592 1043 Gene3D - 9 259 IPR027417 -
Bhi01g02592 1043 SUPERFAMILY Smc hinge domain 416 604 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bhi01g02592 1043 Gene3D - 791 1040 IPR027417 -
Bhi01g02592 1043 Coils Coil 795 815 - -
Bhi01g02592 1043 Coils Coil 355 389 - -
Bhi01g02592 1043 Coils Coil 333 353 - -
Bhi01g02592 1043 Pfam RecF/RecN/SMC N terminal domain 9 1037 IPR003395 -
Bhi01g02592 1043 Coils Coil 305 325 - -
Bhi01g02592 1043 Coils Coil 277 297 - -
Bhi01g02592 1043 CDD ABC_SMC6_euk 949 1043 - -
Bhi01g02592 1043 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 4 1043 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02592 Bhi-Chr1:63949951 Bhi03g02507 Bhi-Chr3:60230843 6.11E-36 dispersed
Bhi01g02592 Bhi-Chr1:63949951 Bhi01g02593 Bhi-Chr1:63949951 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02592 K22804 - csv:101208493 1917.12