Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02671 CACACGCTTTGTAATTTTCCCAAACTGACACTGAACAGAACCACTCATTCACTCTCACCGTTCCCTTCTTCCCGGCGAAATCAACCGCTTCCGCCGGCGACCTTCTTCCCCTTCAACCTCCCACCTCCATGGCCAAAAAGCTTCCACATCCCCTCACCCATTTCTCCATCATGCGCTTTCTGTTCTAGGGTTTCTTTCCTTTCCCCTCTTCTGTGTTTCCTGGAAAGTAATGGACTGCCAATCCAGTCACACATTTGATTCAGATGAAAGTGACATCGATATTCAGACTGAAATCTGTGAGAAGGGTGGGAGTATAGATGATATTCGTAATGACTTGGACTTTTGCTTGCGTGATGATGATAAGGTAGCAGAACAATCTGTTGTAGATTTACCTATGGATGGAGTAGGACCATACATAGGTATGGAGTTCAGTTCTAGAGACGAAGCTAGAGAATTCTATGTTAATTATGGTAGGCGTGTTGGATTCACCGTACGAATACATCATAATCGTCGTTCCCGTGTAAACAATCAGGTGATTGGTCAGGATTTTGTCTGCTCAAAAGAAGGATTTCGTGCTAAAAAGTATGTATGCCGAAAAGACAGGATACTTCCAGCACCACCAATTACACGAGAGGGATGTCAAGCAATGATGAGATTAGCTTTAAGGGATGGAGGGAAGTGGGCTGTCACTAAATTTGTTAAAGATCACAATCATCTGTTACTGAGTCCTAGTAAAGTCCCATGGCGAGGATCTGGAAAAAACTTGCTCAATGAGGATGAAAAGGATAAGCGGATTCAAGAATTATCTATTGAGTTGTACAATGAGAGGCAGAAATATAAGAGAAAATGTGCTGCATATGAAGAACAATTGAAAACAATTTTGAAGGAGCTGGAAATGCACACAGAATGTATATCAAACAAAGTTGCAGAAGTAGTAAAGAGCATTAGAGAAGTTGAAGAGGAAGAAGAATCAGAAGGTTTGAATGAAGGCTGGATTTAAATTATCACAACTTCACTAACTTATCATATATCATATCTAATCTTAGGTACGGTTTTTTTTTTTTTTTTTTTGTTAG 1076 40.33 MDCQSSHTFDSDESDIDIQTEICEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVGPYIGMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRKDRILPAPPITREGCQAMMRLALRDGGKWAVTKFVKDHNHLLLSPSKVPWRGSGKNLLNEDEKDKRIQELSIELYNERQKYKRKCAAYEEQLKTILKELEMHTECISNKVAEVVKSIREVEEEEESEGLNEGWI 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66432516 66435084 + XM_039046207.1 Bhi01g02671 25444

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02671 256 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 248 - -
Bhi01g02671 256 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 248 - -
Bhi01g02671 256 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Bhi01g02671 256 Coils Coil 193 220 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02671 - - - bhj:120088768 492.271
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02671 Bhi-Chr1:66432516 Bhi09g01238 Bhi-Chr9:29768505 1.14E-42 dispersed
Bhi01g02670 Bhi-Chr1:66432516 Bhi01g02671 Bhi-Chr1:66432516 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1219 . . . . . . . . . . . . . . . . . Bhi01g02671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013506 1 2 1 0 0 1 1 0 0 1 0 1 1 0 1 1 0 0 1 0 1 1 1 1 1 0 1 3 2 2 25
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
258 PF03101 FAR1 5.20E-26 CL0274 Bhi TF