Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi01g02687 | AACATAAAAGGGAAGGTCTCAAGGAGAGGGGAGGAAAAAAAAAAAAAAGAAAACTCATTTGTTAATCGTGGGTCCAAATAAGCCATAGTCGTCTTCTAGGCGGGAAGCTACGAAAAGAATTAGAACCAAAGCAGCTTCCATGGCGGGAACGACCTAAAAGAAGAGAACACACACTCGAAGAAGAAACGCTCAAGTAAAGAGAGGAAGAGTGATTTTCTTGTAAACTGAAGTAGCGAGTAGAAATCAGCAATGTCTTCGCAATATCCAGTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTAGTTCATATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCGAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCGAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTAGTCACCAAGGTTCTAGGCATTGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGTGATCCTGAAAAGTACAGAATTAAGTTGTCTGAAAAATTTCCCAGTGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCACGTCATATTTCAAAGACATTGTTGAAGTATCATGGGAGTCGGACAAAGTGGATGAAGATGGGGCAACGACGGGAAGTGGTAAGAAACAATTAAGACTAAGCAGTGTTGGTATCACCACATCGAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACAATTCTATGTTTCAACCATCCTCCACATGTTAAAGATTAATCAAGTAGCTGATAACCAATAGTTTGGCTGTGTACTAACTGGGTGTTGTGCTTAGAAGACATTTTTTAGATGGTAACCGGCATGTACTTGACTTTCTTTAAAGGTATTTCAATGTCTGTAATAGCCTAAGTTTCAAATCAAATACATAATTTTGTGGTTAAAAAATA | 1362 | 39.79 | MSSQYPVPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGIGVLLTEVYVDTVGDPEKYRIKLSEKFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATTGSGKKQLRLSSVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 66576055 | 66580117 | - | XM_039046336.1 | Bhi01g02687 | 25460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi01g02687 | 297 | TIGRFAM | TIGR00729: ribonuclease HII | 16 | 228 | IPR004649 | GO:0004523|GO:0016070 | |
Bhi01g02687 | 297 | CDD | RNase_HII_eukaryota_like | 17 | 233 | - | - | |
Bhi01g02687 | 297 | PANTHER | RIBONUCLEASE | 6 | 296 | - | - | |
Bhi01g02687 | 297 | PANTHER | RIBONUCLEASE H2 SUBUNIT A | 6 | 296 | IPR001352 | GO:0003723|GO:0004523 | |
Bhi01g02687 | 297 | Pfam | Ribonuclease HII | 17 | 227 | IPR024567 | GO:0004523 | |
Bhi01g02687 | 297 | Gene3D | Ribonuclease hii. Domain 2 | 187 | 235 | IPR023160 | GO:0004523 | |
Bhi01g02687 | 297 | Gene3D | - | 1 | 186 | IPR036397 | GO:0003676 | |
Bhi01g02687 | 297 | SUPERFAMILY | Ribonuclease H-like | 15 | 232 | IPR012337 | - | |
Bhi01g02687 | 297 | ProSiteProfiles | Ribonuclease (RNase) H type-2 domain profile. | 14 | 236 | IPR024567 | GO:0004523 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi01g02687 | Bhi-Chr1:66576055 | Bhi09g00949 | Bhi-Chr9:21537171 | 3.66E-28 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi01g02687 | K10743 | - | csv:101210143 | 573.548 |