Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02687 AACATAAAAGGGAAGGTCTCAAGGAGAGGGGAGGAAAAAAAAAAAAAAGAAAACTCATTTGTTAATCGTGGGTCCAAATAAGCCATAGTCGTCTTCTAGGCGGGAAGCTACGAAAAGAATTAGAACCAAAGCAGCTTCCATGGCGGGAACGACCTAAAAGAAGAGAACACACACTCGAAGAAGAAACGCTCAAGTAAAGAGAGGAAGAGTGATTTTCTTGTAAACTGAAGTAGCGAGTAGAAATCAGCAATGTCTTCGCAATATCCAGTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTAGTTCATATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCGAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCGAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTAGTCACCAAGGTTCTAGGCATTGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGTGATCCTGAAAAGTACAGAATTAAGTTGTCTGAAAAATTTCCCAGTGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCACGTCATATTTCAAAGACATTGTTGAAGTATCATGGGAGTCGGACAAAGTGGATGAAGATGGGGCAACGACGGGAAGTGGTAAGAAACAATTAAGACTAAGCAGTGTTGGTATCACCACATCGAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACAATTCTATGTTTCAACCATCCTCCACATGTTAAAGATTAATCAAGTAGCTGATAACCAATAGTTTGGCTGTGTACTAACTGGGTGTTGTGCTTAGAAGACATTTTTTAGATGGTAACCGGCATGTACTTGACTTTCTTTAAAGGTATTTCAATGTCTGTAATAGCCTAAGTTTCAAATCAAATACATAATTTTGTGGTTAAAAAATA 1362 39.79 MSSQYPVPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGIGVLLTEVYVDTVGDPEKYRIKLSEKFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATTGSGKKQLRLSSVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66576055 66580117 - XM_039046336.1 Bhi01g02687 25460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02687 297 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Bhi01g02687 297 CDD RNase_HII_eukaryota_like 17 233 - -
Bhi01g02687 297 PANTHER RIBONUCLEASE 6 296 - -
Bhi01g02687 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 6 296 IPR001352 GO:0003723|GO:0004523
Bhi01g02687 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bhi01g02687 297 Gene3D Ribonuclease hii. Domain 2 187 235 IPR023160 GO:0004523
Bhi01g02687 297 Gene3D - 1 186 IPR036397 GO:0003676
Bhi01g02687 297 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Bhi01g02687 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02687 Bhi-Chr1:66576055 Bhi09g00949 Bhi-Chr9:21537171 3.66E-28 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02687 K10743 - csv:101210143 573.548