Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02708 TTTGCCAGCCGTAGGCTTCAATTTCCTTTGCCTCTTTGTGGTTTTATGTATTGTCTTTTAGACTTGTTTTCAGTACATAATTATTTCCACTCAACAAACACAACATCAAATTTTTTTTTTCAAGGGATGATAAAAAGTTTGTTGTTTCAACAACAAGCTCAAGCTATGGAGGAAAATTTGTCCAATTTAACTTCGGCTTCTGGTGAAGCTAGTGCCTGCTCCGGCAACCATTCCGATCAGATTCCGACCAACTACTCCGGCCAGTATTTTGCTACTACCCAACCACCACCACCAAAAAAGAAGAGAAACCTCCCCGGAAATCCAGACCCAGATGCAGAAGTGATAGCTTTATCGCCGAAGACGCTTATGGCGACGAATAGATTCGTATGCGAGATCTGTGGTAAGGGATTTCAGAGAGATCAGAATCTTCAGCTTCATAGAAGAGGGCATAATCTTCCATGGAAGTTAAAGCAAAGAACAAACAAAGAGGTAATAAGGAAGAAAGTTTATGTGTGCCCAGAAACAAGTTGTGTTCATCATGACCCATCAAGGGCATTAGGGGACTTGACAGGAATCAAAAAGCACTTTTGTAGAAAACATGGTGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCCAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACCCTTTTCTCAAGGAGGGATAGTTTCATCACGCATAGAGCTTTTTGTGATGCTTTAGCAGAGGAAAGTGCAAGAGCCATTACATCAAACCCAATACTAATGACCAATAATATTAATACTAATCAAAACCACCTTCTTCCTCCACTTTCTTCCACTCCCAATATCTCTCACTTAAACTTCCAAATTACACAACAAACCCATTTCAATAGTCCTCCCTTAGATAATAGTCATCATATCAACTCATTTAATTCTCTCAAGAAAGAACAAAATATTAATATTCCCCCATGGTTAGGCTTTCCCAATTCAACCTCAAATGATCATAACAACAATCATCATCAAATTATAAACCCTAATCATAATAATCTTGGTCCCACTTCTCTTCATCTAATCCAAAGTGCTTCCCCTTCTTCTCCTCACATGTCAGCCACAGCACTTCTTCAGAAAGCAGCTCAAATGGGAGCTACCATGAGTAGTAATACTGAGCCACCACACACAATCACTCCTCAACAACATAATGATAATAATAATAATAATAATACAAATTGTAATTTTGGCCTTGACTTGTCCTCCGCCTCCTCCTCCTCACGTGACATTCATCAACAACAGAATCAGACTTTGATGATGATGGGCAGTACGAGTAATTGTAGTAGTACCACTGAAGCTGCAGGGCTTTCTCATGCACTGCCATTCTACAGGAATAAAACCAATTTTGAAGGAGGGGCTTCTTTTGAATTAGAGCAATTTGGAGGGGTTTTCAAGAAAAATATTGATCATCAAGCAGGGCTGAGTACAAGAGATTTCTTGGGGTTGAGAGCTATTTCTCATACTGAGTTTTTGAGTAATATTGCAGCTGCTGGTTATAGTAATTGCATCAATAATAATAATAATAATAATGTTGCTGCTCAAACTCCTCAACAAACTCAAATTCAAAATCAATCCACTTGGCAAGGTTAGAACAAAATTCAAACTTCCTTTTTTCTTTTCTTTTTTAGATTATATTATTTTTTTTTACAAAGGGGGTCTTTTTTTCCCCTAAGGGGGAAGGACCACCATTTCTTGAATTAGGAATTTTTGGATCATAATATTCTATATGTTTTTGTATTTATGGATATATATATATATTTCAATGTATAATACTTAGTGGATTCCTTGGTATGAATGAAATTATAAAGTTAAACCCATGTTTGGAA 1901 37.3 MYCLLDLFSVHNYFHSTNTTSNFFFQGMIKSLLFQQQAQAMEENLSNLTSASGEASACSGNHSDQIPTNYSGQYFATTQPPPPKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITSNPILMTNNINTNQNHLLPPLSSTPNISHLNFQITQQTHFNSPPLDNSHHINSFNSLKKEQNINIPPWLGFPNSTSNDHNNNHHQIINPNHNNLGPTSLHLIQSASPSSPHMSATALLQKAAQMGATMSSNTEPPHTITPQQHNDNNNNNNTNCNFGLDLSSASSSSRDIHQQQNQTLMMMGSTSNCSSTTEAAGLSHALPFYRNKTNFEGGASFELEQFGGVFKKNIDHQAGLSTRDFLGLRAISHTEFLSNIAAAGYSNCINNNNNNNVAAQTPQQTQIQNQSTWQG 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67089612 67092833 - XM_039048409.1 Bhi01g02708 25481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02708 539 SUPERFAMILY beta-beta-alpha zinc fingers 112 210 IPR036236 -
Bhi01g02708 539 MobiDBLite consensus disorder prediction 372 404 - -
Bhi01g02708 539 Pfam Zinc finger, C2H2 type 113 135 IPR013087 -
Bhi01g02708 539 Gene3D Classic Zinc Finger 109 136 - -
Bhi01g02708 539 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 47 503 - -
Bhi01g02708 539 SMART c2h2final6 190 210 IPR013087 -
Bhi01g02708 539 SMART c2h2final6 155 185 IPR013087 -
Bhi01g02708 539 SMART c2h2final6 113 135 IPR013087 -
Bhi01g02708 539 ProSiteProfiles Zinc finger C2H2 type domain profile. 113 135 IPR013087 -
Bhi01g02708 539 MobiDBLite consensus disorder prediction 338 360 - -
Bhi01g02708 539 MobiDBLite consensus disorder prediction 69 97 - -
Bhi01g02708 539 ProSitePatterns Zinc finger C2H2 type domain signature. 115 135 IPR013087 -
Bhi01g02708 539 Gene3D Classic Zinc Finger 148 238 - -
Bhi01g02708 539 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 47 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02708 Bhi-Chr1:67089612 Bhi01g02710 Bhi-Chr1:67089612 0 dispersed
Bhi02g02101 Bhi-Chr2:56924195 Bhi01g02708 Bhi-Chr1:67089612 1.65E-107 dispersed
Bhi04g00265 Bhi-Chr4:6358825 Bhi01g02708 Bhi-Chr1:67089612 6.98E-110 dispersed
Bhi08g00291 Bhi-Chr8:11407898 Bhi01g02708 Bhi-Chr1:67089612 1.79E-115 dispersed
Bhi10g01366 Bhi-Chr10:32807749 Bhi01g02708 Bhi-Chr1:67089612 8.22E-115 dispersed
Bhi01g02708 Bhi-Chr1:67089612 Bhi01g02709 Bhi-Chr1:67089612 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
259 PF00096 zf-C2H2 0.0024 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02708 K25870 - csv:101204728 729.169