Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02709 CTTCTTTCTGGTTATTTATTTTTATTATTATTATTATTTTTGTTCATATTTGGGTGGCTATTAATTATTCTACTTCATTGGTATTATCAAGATTTATAATATTTACTTCACCAAAAACCAAACCCAGGATTTTGTTTCTCTCAGAATTTTGTTTATTCTCTCTTCATCTCTTCTCTCTTTCATGCATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTCTGAAAATTGTCTCTTGGGTGAGTGCCAAATTCAACACAGATTCAAATTCAAGAGCTTTGGTGAGTTTTAAGTAAGTTTATGCAGAAAATGATCAAAAGAGACGACTTTTTAGGGATGATAAAAAGTTTGTTGTTTCAACAACAAGCTCAAGCTATGGAGGAAAATTTGTCCAATTTAACTTCGGCTTCTGGTGAAGCTAGTGCCTGCTCCGGCAACCATTCCGATCAGATTCCGACCAACTACTCCGGCCAGTATTTTGCTACTACCCAACCACCACCACCAAAAAAGAAGAGAAACCTCCCCGGAAATCCAGACCCAGATGCAGAAGTGATAGCTTTATCGCCGAAGACGCTTATGGCGACGAATAGATTCGTATGCGAGATCTGTGGTAAGGGATTTCAGAGAGATCAGAATCTTCAGCTTCATAGAAGAGGGCATAATCTTCCATGGAAGTTAAAGCAAAGAACAAACAAAGAGGTAATAAGGAAGAAAGTTTATGTGTGCCCAGAAACAAGTTGTGTTCATCATGACCCATCAAGGGCATTAGGGGACTTGACAGGAATCAAAAAGCACTTTTGTAGAAAACATGGTGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCCAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACCCTTTTCTCAAGGAGGGATAGTTTCATCACGCATAGAGCTTTTTGTGATGCTTTAGCAGAGGAAAGTGCAAGAGCCATTACATCAAACCCAATACTAATGACCAATAATATTAATACTAATCAAAACCACCTTCTTCCTCCACTTTCTTCCACTCCCAATATCTCTCACTTAAACTTCCAAATTACACAACAAACCCATTTCAATAGTCCTCCCTTAGATAATAGTCATCATATCAACTCATTTAATTCTCTCAAGAAAGAACAAAATATTAATATTCCCCCATGGTTAGGCTTTCCCAATTCAACCTCAAATGATCATAACAACAATCATCATCAAATTATAAACCCTAATCATAATAATCTTGGTCCCACTTCTCTTCATCTAATCCAAAGTGCTTCCCCTTCTTCTCCTCACATGTCAGCCACAGCACTTCTTCAGAAAGCAGCTCAAATGGGAGCTACCATGAGTAGTAATACTGAGCCACCACACACAATCACTCCTCAACAACATAATGATAATAATAATAATAATAATACAAATTGTAATTTTGGCCTTGACTTGTCCTCCGCCTCCTCCTCCTCACGTGACATTCATCAACAACAGAATCAGACTTTGATGATGATGGGCAGTACGAGTAATTGTAGTAGTACCACTGAAGCTGCAGGGCTTTCTCATGCACTGCCATTCTACAGGAATAAAACCAATTTTGAAGGAGGGGCTTCTTTTGAATTAGAGCAATTTGGAGGGGTTTTCAAGAAAAATATTGATCATCAAGCAGGGCTGAGTACAAGAGATTTCTTGGGGTTGAGAGCTATTTCTCATACTGAGTTTTTGAGTAATATTGCAGCTGCTGGTTATAGTAATTGCATCAATAATAATAATAATAATAATGTTGCTGCTCAAACTCCTCAACAAACTCAAATTCAAAATCAATCCACTTGGCAAGGTTAGAACAAAATTCAAACTTCCTTTTTTCTTTTCTTTTTTAGATTATATTATTTTTTTTTACAAAGGGGGTCTTTTTTTCCCCTAAGGGGGAAGGACCACCATTTCTTGAATTAGGAATTTTTGGATCATAATATTCTATATGTTTTTGTATTTATGGATATATATATATATTTCAATGTATAATACTTAGTGGATTCCTTGGTATGAATGAAATTATAAAGTTAAACCCATGTTTGGAA 2116 35.87 MQKMIKRDDFLGMIKSLLFQQQAQAMEENLSNLTSASGEASACSGNHSDQIPTNYSGQYFATTQPPPPKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITSNPILMTNNINTNQNHLLPPLSSTPNISHLNFQITQQTHFNSPPLDNSHHINSFNSLKKEQNINIPPWLGFPNSTSNDHNNNHHQIINPNHNNLGPTSLHLIQSASPSSPHMSATALLQKAAQMGATMSSNTEPPHTITPQQHNDNNNNNNTNCNFGLDLSSASSSSRDIHQQQNQTLMMMGSTSNCSSTTEAAGLSHALPFYRNKTNFEGGASFELEQFGGVFKKNIDHQAGLSTRDFLGLRAISHTEFLSNIAAAGYSNCINNNNNNNVAAQTPQQTQIQNQSTWQG 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67089612 67092681 - XM_039048413.1 Bhi01g02709 25482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02709 524 MobiDBLite consensus disorder prediction 320 345 - -
Bhi01g02709 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 120 IPR013087 -
Bhi01g02709 524 Gene3D Classic Zinc Finger 94 121 - -
Bhi01g02709 524 MobiDBLite consensus disorder prediction 54 81 - -
Bhi01g02709 524 MobiDBLite consensus disorder prediction 357 388 - -
Bhi01g02709 524 Gene3D Classic Zinc Finger 133 223 - -
Bhi01g02709 524 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Bhi01g02709 524 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 32 488 - -
Bhi01g02709 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 488 - -
Bhi01g02709 524 Pfam Zinc finger, C2H2 type 98 120 IPR013087 -
Bhi01g02709 524 SMART c2h2final6 175 195 IPR013087 -
Bhi01g02709 524 SMART c2h2final6 140 170 IPR013087 -
Bhi01g02709 524 SMART c2h2final6 98 120 IPR013087 -
Bhi01g02709 524 SUPERFAMILY beta-beta-alpha zinc fingers 97 195 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02709 Bhi-Chr1:67089612 Bhi01g02711 Bhi-Chr1:67089612 0 dispersed
Bhi05g01393 Bhi-Chr5:48916748 Bhi01g02709 Bhi-Chr1:67089612 2.49E-114 dispersed
Bhi01g02708 Bhi-Chr1:67089612 Bhi01g02709 Bhi-Chr1:67089612 0 tandem
Bhi01g02709 Bhi-Chr1:67089612 Bhi01g02710 Bhi-Chr1:67089612 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
260 PF00096 zf-C2H2 0.0023 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02709 K25870 - csv:101204728 729.169