Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02711 TTCTTTCTGGTTATTTATTTTTATTATTATTATTATTTTTGTTCATATTTGGGTGGCTATTAATTATTCTACTTCATTGGTATTATCAAGATTTATAATATTTACTTCACCAAAAACCAAACCCAGGATTTTGTTTCTCTCAGAATTTTGTTTATTCTCTCTTCATCTCTTCTCTCTTTCATGCATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTCTGAAAATTGTCTCTTGGGTGAGTGCCAAATTCAACACAGATTCAAATTCAAGAGCTTTGGTGAGTTTTAAGGATGATAAAAAGTTTGTTGTTTCAACAACAAGCTCAAGCTATGGAGGAAAATTTGTCCAATTTAACTTCGGCTTCTGGTGAAGCTAGTGCCTGCTCCGGCAACCATTCCGATCAGATTCCGACCAACTACTCCGGCCAGTATTTTGCTACTACCCAACCACCACCACCAAAAAAGAAGAGAAACCTCCCCGGAAATCCAGACCCAGATGCAGAAGTGATAGCTTTATCGCCGAAGACGCTTATGGCGACGAATAGATTCGTATGCGAGATCTGTGGTAAGGGATTTCAGAGAGATCAGAATCTTCAGCTTCATAGAAGAGGGCATAATCTTCCATGGAAGTTAAAGCAAAGAACAAACAAAGAGGTAATAAGGAAGAAAGTTTATGTGTGCCCAGAAACAAGTTGTGTTCATCATGACCCATCAAGGGCATTAGGGGACTTGACAGGAATCAAAAAGCACTTTTGTAGAAAACATGGTGAGAAGAAATGGAAATGTGATAAGTGCTCTAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCATTCCAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACCCTTTTCTCAAGGAGGGATAGTTTCATCACGCATAGAGCTTTTTGTGATGCTTTAGCAGAGGAAAGTGCAAGAGCCATTACATCAAACCCAATACTAATGACCAATAATATTAATACTAATCAAAACCACCTTCTTCCTCCACTTTCTTCCACTCCCAATATCTCTCACTTAAACTTCCAAATTACACAACAAACCCATTTCAATAGTCCTCCCTTAGATAATAGTCATCATATCAACTCATTTAATTCTCTCAAGAAAGAACAAAATATTAATATTCCCCCATGGTTAGGCTTTCCCAATTCAACCTCAAATGATCATAACAACAATCATCATCAAATTATAAACCCTAATCATAATAATCTTGGTCCCACTTCTCTTCATCTAATCCAAAGTGCTTCCCCTTCTTCTCCTCACATGTCAGCCACAGCACTTCTTCAGAAAGCAGCTCAAATGGGAGCTACCATGAGTAGTAATACTGAGCCACCACACACAATCACTCCTCAACAACATAATGATAATAATAATAATAATAATACAAATTGTAATTTTGGCCTTGACTTGTCCTCCGCCTCCTCCTCCTCACGTGACATTCATCAACAACAGAATCAGACTTTGATGATGATGGGCAGTACGAGTAATTGTAGTAGTACCACTGAAGCTGCAGGGCTTTCTCATGCACTGCCATTCTACAGGAATAAAACCAATTTTGAAGGAGGGGCTTCTTTTGAATTAGAGCAATTTGGAGGGGTTTTCAAGAAAAATATTGATCATCAAGCAGGGCTGAGTACAAGAGATTTCTTGGGGTTGAGAGCTATTTCTCATACTGAGTTTTTGAGTAATATTGCAGCTGCTGGTTATAGTAATTGCATCAATAATAATAATAATAATAATGTTGCTGCTCAAACTCCTCAACAAACTCAAATTCAAAATCAATCCACTTGGCAAGGTTAGAACAAAATTCAAACTTCCTTTTTTCTTTTCTTTTTTAGATTATATTATTTTTTTTTACAAAGGGGGTCTTTTTTTCCCCTAAGGGGGAAGGACCACCATTTCTTGAATTAGGAATTTTTGGATCATAATATTCTATATGTTTTTGTATTTATGGATATATATATATATTTCAATGTATAATACTTAGTGGATTCCTTGGTATGAATGAAATTATAAAGTTAAACCCATGTTTGGAA 2073 35.94 MIKSLLFQQQAQAMEENLSNLTSASGEASACSGNHSDQIPTNYSGQYFATTQPPPPKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITSNPILMTNNINTNQNHLLPPLSSTPNISHLNFQITQQTHFNSPPLDNSHHINSFNSLKKEQNINIPPWLGFPNSTSNDHNNNHHQIINPNHNNLGPTSLHLIQSASPSSPHMSATALLQKAAQMGATMSSNTEPPHTITPQQHNDNNNNNNTNCNFGLDLSSASSSSRDIHQQQNQTLMMMGSTSNCSSTTEAAGLSHALPFYRNKTNFEGGASFELEQFGGVFKKNIDHQAGLSTRDFLGLRAISHTEFLSNIAAAGYSNCINNNNNNNVAAQTPQQTQIQNQSTWQG 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67089612 67092680 - XM_039048420.1 Bhi01g02711 25484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02711 512 Gene3D Classic Zinc Finger 82 109 - -
Bhi01g02711 512 MobiDBLite consensus disorder prediction 308 333 - -
Bhi01g02711 512 SMART c2h2final6 86 108 IPR013087 -
Bhi01g02711 512 SMART c2h2final6 128 158 IPR013087 -
Bhi01g02711 512 SMART c2h2final6 163 183 IPR013087 -
Bhi01g02711 512 MobiDBLite consensus disorder prediction 42 69 - -
Bhi01g02711 512 Pfam Zinc finger, C2H2 type 86 108 IPR013087 -
Bhi01g02711 512 SUPERFAMILY beta-beta-alpha zinc fingers 85 183 IPR036236 -
Bhi01g02711 512 MobiDBLite consensus disorder prediction 345 376 - -
Bhi01g02711 512 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 476 - -
Bhi01g02711 512 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Bhi01g02711 512 Gene3D Classic Zinc Finger 121 211 - -
Bhi01g02711 512 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Bhi01g02711 512 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 20 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02709 Bhi-Chr1:67089612 Bhi01g02711 Bhi-Chr1:67089612 0 dispersed
Bhi01g02711 Bhi-Chr1:67089612 Bhi09g00372 Bhi-Chr9:7784090 1.10E-134 dispersed
Bhi01g02710 Bhi-Chr1:67089612 Bhi01g02711 Bhi-Chr1:67089612 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
262 PF00096 zf-C2H2 0.0022 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02711 K25870 - csv:101204728 729.169