Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02738 ACAAAAAGAGGCCGAAGAACAGCCTACTCCTCTTCTTCTTCTCGTTGTTGTTGGAAGTAATAACCCCAACGAAGGCGAACTTTTCTTCACGAAGTGATCTTCAGATAAGCCAAAAACGGCGAATCAGAATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGACCTCAAGGATAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCGGCTCCTAAAGCAAAAGCTATTGTTGCTGCTATTTCTAACAACCAAAACTCTGCTCCTGCTAAGGTTAATGCATCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTCCCAAGGTATTATTCAATGATTTTTGAAGCCCTCTCAACCATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAATTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAGGTAAAAAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATAGCGCAATATACTATGGGAGGGGTGATGCCATCGGGGGAGACGGTGGAAGATGCAGCGAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCTGAAGCTGTCAAGGAGGCAGAGAGAATCGCAAAGATGGCAGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATGTTCCCGTGGTGAAATTATTCTCTTGGCTTAGATCACTTGTAAGTTTAATGGCCAATCCTTTGTTGTTTTTAGTATCCGCAGTGTAAATTCTTCAATCCAGTGGAATTTTCAGCCTTCTCTGTGCCTCCAAATTCCACGTTGCTTCGTTTTTTCTTCTTTTTCGGGATGCATCGAATTAATTATAGTTTGGTATACAAATATTTAACTAGATGTTCTTAAAA 1155 41.73 MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTASQGSKEKSRAAPKAKAIVAAISNNQNSAPAKVNASADTAGDDTPNNSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKKDNSLAVKTPTPKQKDVRQRIAQYTMGGVMPSGETVEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKCSRGEIILLA 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67414937 67419177 + XM_039032827.1 Bhi01g02738 25511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02738 278 MobiDBLite consensus disorder prediction 88 114 - -
Bhi01g02738 278 SMART sant 4 59 IPR001005 -
Bhi01g02738 278 SUPERFAMILY Winged helix DNA-binding domain 111 193 IPR036390 -
Bhi01g02738 278 Pfam linker histone H1 and H5 family 116 175 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi01g02738 278 SMART h15plus2 112 177 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi01g02738 278 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 1 277 - -
Bhi01g02738 278 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Bhi01g02738 278 Gene3D - 111 198 IPR036388 -
Bhi01g02738 278 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 114 182 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bhi01g02738 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Bhi01g02738 278 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Bhi01g02738 278 MobiDBLite consensus disorder prediction 1 27 - -
Bhi01g02738 278 PANTHER SINGLE MYB HISTONE 4 1 277 IPR044597 GO:0003691
Bhi01g02738 278 CDD SANT_TRF 6 56 - -
Bhi01g02738 278 Gene3D - 8 87 - -
Bhi01g02738 278 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02738 Bhi-Chr1:67414937 Bhi11g01127 Bhi-Chr11:32919601 2.44E-38 dispersed
Bhi10g00882 Bhi-Chr10:17969748 Bhi01g02738 Bhi-Chr1:67414937 2.97E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
263 PF00538 Linker_histone 2.20E-10 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02738 K09422 - csv:101202785 521.546