Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02739 CCTTAGAAAACCTAACGCCCTCGCATTATAACTTCAGTCCTTAAGCATTAGCCTCCTTTTCAACTCCACGGCGCAGATCCGAGGAGTTTGTGAATCTCTCGCTATCTTCCAACGCTTTCTAATCTTCTTCCAATCCTTCGTTTCTCACTGATCTACAGATATGGCTGGTTTGGCTCCGGAAGGTTCTCAATTTGATGCACGTCAATATGACACGAAAATGAATGAGTTACTTTCAGCTGATGGACAGGATTTCTTCACCTCATATGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACTGGGAAGACTGCAACTTTTTGCTCTGGCATTTTGCAACAACTTGATTACGGTGTTGTGCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCACAACAGATTGAGAAGGTTATGCGAGCCCTTGGTGATTATCTTGGTGTGAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTACGTGAAGATCAACGCATTCTCCAAGCTGGTGTTCATGTGGTTGTTGGTACACCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCCGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATTTATGACATTTTCCAGCTGCTGCCATCCAAGATTCAGGTCGGGGTCTTCTCTGCTACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCTGTTAGAATTCTTGTAAAGCGTGACGAGCTCACTTTGGAAGGTATCAAGCAGTTCTATGTCAATGTTGACAAGGAAGACTGGAAGCTTGAGACTCTTTGTGATCTTTACGAGACTTTGGCCATCACCCAGAGTGTTATCTTTGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGAAGCCGTGACCACACCGTATCTGCTACTCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGATCGGGTTCTTCTAGGGTTCTGATCACCACTGATCTATTGGCCCGTGGTATCGATGTCCAGCAGGTTTCTCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAATTACCTTCATCGTATTGGAAGAAGTGGACGTTTTGGAAGGAAAGGTGTTGCGATCAACTTTGTAACGACGGAGGATGAAAGAATGCTATTCGACATTCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCCGCTAATGTTGCTGATCTCCTGTGAGAAGGGAAGGGAAGGGAAGGGGAAATATTGTGGTAGAGATTGAGGCGTGGTTTTCTCGTTGAAGTACTCAAGCTTTTTTCAACCTCTTTTATCTTTTTGCTCTCTACTTTTTTAGTGTCTTAAATTAAAATATTCTTGAACCTATCTGACCTTGGAAAATGGTGTGCTCTACACCACTGCAATATAAAAGATTGTCAAATTGCCTTTCTGGTAAATTATGGGCCTTTTTGTTTCTGTTGGGGTTTTGTATTGTATTTGAGGTTTTTTTCTGTTGCCTTTTTTTCCAAGTTATAAAAAAAAACTCGGTTGGTTGTCTTTGCAA 1724 43.27 MAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGVVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67420416 67424531 + XM_039031776.1 Bhi01g02739 25512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02739 413 Pfam DEAD/DEAH box helicase 65 226 IPR011545 GO:0003676|GO:0005524
Bhi01g02739 413 Gene3D - 30 248 IPR027417 -
Bhi01g02739 413 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 23 413 - -
Bhi01g02739 413 Gene3D - 249 413 IPR027417 -
Bhi01g02739 413 CDD DEADc_EIF4A 45 242 - -
Bhi01g02739 413 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Bhi01g02739 413 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 71 241 IPR014001 -
Bhi01g02739 413 PANTHER RNA HELICASE 23 413 - -
Bhi01g02739 413 CDD SF2_C_DEAD 253 383 - -
Bhi01g02739 413 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 413 IPR001650 -
Bhi01g02739 413 SMART helicmild6 293 374 IPR001650 -
Bhi01g02739 413 SMART ultradead3 59 256 IPR014001 -
Bhi01g02739 413 Pfam Helicase conserved C-terminal domain 266 374 IPR001650 -
Bhi01g02739 413 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 187 195 IPR000629 -
Bhi01g02739 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 394 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02739 Bhi-Chr1:67420416 Bhi09g00364 Bhi-Chr9:7599653 0 dispersed
Bhi11g01298 Bhi-Chr11:38348665 Bhi01g02739 Bhi-Chr1:67420416 5.39E-44 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02739 K03257 - csv:101223055 816.224