Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02828 TCCTGACGCCAAAATCCATCCACCACCACACATCTTCGATAATGGCACAAACAGACGACTCCGCCGCCGCCGGAGTTTCGTTCTCCGGCAGGCCCATTTCCATTTCCAACATAAAAAGCAAGCTCTTGGTCTTGGCCATGTCGGCTACACTTCTCGTCGCCGGCGTCTCCTCCTCCGACGAGCAGGTGAGAAGCACGTGCGCCGTGACGCTTTACCCGGAGCTCTGCGAGAAGACGATATCCACCGGCGGGGGAAGTAGGTGGAGTTCAAAAGACGCAATCGAAGCGTCGGTGAATATTACGATTGGTGCGGTGAAGGATAACTATAAAAGGATGGAGAAATTGGTTAAGACAGTGAAGAATCTGACAAAGAGAGAGAAAATTGCTCTGAATGATTGTTTAGAAAGTGAGGAGGAGACGCTGAGAGAGCTGTATGAGGTTGTTGAAGATCTCCATGAATATCCTAACAAGAAATCTCTCACACAGTATGCCGATGACCTCAAAACCTTACTCAGTTCCGCCATCACTAATCAGGAGACATGCGTGGACGGATTCTCGCACGACAAAGCCGACAAGAAGGTACGAGAGTCAATAGAAGCAGGCCTAATTCACATCAAAAAGCTTTGCAGCATTGCATTAGCCTTGATTAAGAACCTAACCGATACCGACATTGCCAATCACAACTACAACGTCCTCAATAGAAAACACCTGGCAGAAGTCAACAACGGCGGCCGTGGCAACGACGACCGAATTAACTGGCCCGATTGGATGTCGTCAGGCGACCGGAGGCTTTTGCAAGCCTCGTCCACAGCCACTCCCGATGTGGTTGTGGCAGCCGACGGGACTGGCAATTTCCGGACAGTGTCAGAGGCGGTTGCGGCTGCGCCTAGTAGAAGTAGCCGAAGATACATAATAAGAATAAAGGCAGGGGTTTATAGAGAAAATGTGAATGTGCCAAGTAGTAAGAGTAATTTAATGTTTTGGGGAGATGGAAGAACCACCACTATAATCACCGGGAACAGAAATGTCGTCGATGGCAGCACTACCTTCAATTCCGCCACCGTTGCGGCAGTGGGAGCAAGGTTTTTGGCGAGAGACATTACGTTTCAGAACACCGCCGGTCCATCGAAGCACCAAGCGGTGGCTCTCCGCGTGGGCTCCGATCTCTCTGCTTTTTACCGCTGCGACATGCTCGCCTATCAAGACACACTCTACGTCCACTCCAACCGCCAATTCTACATCAAGTGCATCATCGTCGGCACCATCGACTTCATCTTCGGCAACGCCGCTGCCGTCATCCAAGACTGTGACATCCACGCCCGCCGCCCCAATCCCGGGCAGAGAAACATGGTCACTGCACAAGGAAGAACAGACCCAAATCAGAACACTGGGATTGTCATCCAAAAATGCAGAATCGGAACCACCTCCGATTTGCAGCAGGTGATCGGAAATTTCCCCACGTTTCTGGGGCGGCCATGGCAGAGATACTCGAGGACGGTAGTCATGCAAACTAGCATTAGCAATGTGATTGATCCGGCAGGGTGGCATGTTTGGAATGGGAATTTTGCGCTTGATACTCTGTTTTACGCTGAGTATCAGAATAGTGGGGCCGGTGCCGATACATCGAGGAGAGTGACGTGGAAGGGGTATAGGGTTATTACCAGCGCGGCGGAAGCTCAGGCCTTCACGGCTGGGAATTTCATCAGCGGCGGCACCTGGCTGAGCTCCACTGGATTTCCATTTTCACTTGGGCTGTAAAATTAATGAGCTACCGACTTCGTGGTTGACTACTGGTTGTTTTGTTGGTTTATTTATCGCTTCTATCAATAGTAACTTACCAGGATATTAATTATTTCCTTTTTAGTTATCAAAGTATTTGTTGGGTTGTGAATTAATTTGGATTGAATTGGCTTA 1913 49.71 MAQTDDSAAAGVSFSGRPISISNIKSKLLVLAMSATLLVAGVSSSDEQVRSTCAVTLYPELCEKTISTGGGSRWSSKDAIEASVNITIGAVKDNYKRMEKLVKTVKNLTKREKIALNDCLESEEETLRELYEVVEDLHEYPNKKSLTQYADDLKTLLSSAITNQETCVDGFSHDKADKKVRESIEAGLIHIKKLCSIALALIKNLTDTDIANHNYNVLNRKHLAEVNNGGRGNDDRINWPDWMSSGDRRLLQASSTATPDVVVAADGTGNFRTVSEAVAAAPSRSSRRYIIRIKAGVYRENVNVPSSKSNLMFWGDGRTTTIITGNRNVVDGSTTFNSATVAAVGARFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSNRQFYIKCIIVGTIDFIFGNAAAVIQDCDIHARRPNPGQRNMVTAQGRTDPNQNTGIVIQKCRIGTTSDLQQVIGNFPTFLGRPWQRYSRTVVMQTSISNVIDPAGWHVWNGNFALDTLFYAEYQNSGAGADTSRRVTWKGYRVITSAAEAQAFTAGNFISGGTWLSSTGFPFSLGL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 70160086 70165438 + XM_039022083.1 Bhi01g02828 25601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02828 571 CDD PMEI-like_3 51 206 - -
Bhi01g02828 571 TIGRFAM PME_inhib: pectinesterase inhibitor domain 32 206 IPR006501 GO:0004857
Bhi01g02828 571 PANTHER PECTINESTERASE 43 570 - -
Bhi01g02828 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 206 IPR035513 -
Bhi01g02828 571 ProSitePatterns Pectinesterase signature 2. 404 413 IPR033131 -
Bhi01g02828 571 Gene3D - 253 571 IPR012334 -
Bhi01g02828 571 Pfam Pectinesterase 260 556 IPR000070 GO:0030599|GO:0042545
Bhi01g02828 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 207 IPR035513 -
Bhi01g02828 571 PANTHER PECTINESTERASE 43 570 - -
Bhi01g02828 571 SMART PMEI_2 44 201 IPR006501 GO:0004857
Bhi01g02828 571 Pfam Plant invertase/pectin methylesterase inhibitor 48 201 IPR006501 GO:0004857
Bhi01g02828 571 ProSitePatterns Pectinesterase signature 1. 285 304 IPR018040 -
Bhi01g02828 571 SUPERFAMILY Pectin lyase-like 254 570 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g02828 Bhi09g00262 CCT
Bhi01g02828 Bhi09g00262 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02828 Bhi-Chr1:70160086 Bhi09g00921 Bhi-Chr9:20518623 3.38E-169 dispersed
Bhi01g01220 Bhi-Chr1:24957552 Bhi01g02828 Bhi-Chr1:70160086 1.54E-149 transposed
Bhi12g00014 Bhi-Chr12:343394 Bhi01g02828 Bhi-Chr1:70160086 1.67E-152 transposed
Bhi01g02828 Bhi-Chr1:70160086 Bhi09g00262 Bhi-Chr9:5502512 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02828 K01051 - csv:101207996 913.679