Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02829 TCTATTGTGTTCCTTTTTATTTATAAAGGCAATTCCCTGAGGGAAAACTCCATTTCTCCATCGCCACGCATTTCCTCTTCACTTTCCAAACCCTAAACTCTCTCTGTCTCTTTTCTCTTCATTCCTCATTTTGCAGAACGAACGGAGCCCCAGCTCTGGAATCCATGGATACCGTCAAGTCCTTCAAGGGCTACGGCAAGGTCGACGAGCTCGAACAGCAAGCTTTCCGCCAAAAGACTCGCCGCCGGTTAATTATACTCCTTGTTTCCATTGTTCTTCTAATTGCTCTCGTCATCGCCGCCGTCGTCGGAATCGTCATTCATAAACGAAACTCTTCTTCTTCATCGGCCACGAGCTCACCTCCTCCCACCGAGCTCACTCCCCTCGCCTCACTCAAAACTCTCTGTAGTGTCACTCAGTATCCTAGTTCGTGTCAGTCTTCTCTCGAAAACTCCAACACCACCGATCCCGTATTTCTCTTCAAACTTTCTCTCCGTGTCGCCACCGATTCGCTCTCGAAACTATCCGATTATACCTCTAATCTCAATTCCAATACTGAAGATCCGAAGCTTAAAGCCGCAATTGAAATCTGCCGGAGTGTTTTTGAAGATGCCATTGACACGCTCAACGACACCGTTTCATCCATGGAAGTGGATCGCCATAATGAGAAGTTCTTGTCCCCGTCTAGGATTGACGATCTGAAAACCTGGTTGAGTACTACAATCACAGATCAAGAAACCTGCCTCGACGCTCTTCGAGATCTAAACCAGACGACGGTTCTCCAAAACTTGCAAACGGCAATGGCGAATTCGACCGAGTTTACTAGCAATAGTTTAGCGATTGTAACGAAAATCCTTCGGCTGTTGGCCGATTTCGACATCCCTATCCATCGGAAACTGATGGGATTCCCGGATTGGGTAAGCTCCGGCGACCGAAGGCTTCTGCAGGAGAACAATGTGACGGCGCATGTGACGGTGTCGAAGGATGGGAAAGGGAACTACACGACGATCAAAGATGCCGTAGCGGCGGTGCCAAAGAAGAGCAAACAAAGATTCATCATATATGTGAAAGAAGGACTATACGAAGAGAATGTGATTCTGGACAAGAGCAAGTGGAATGTTATGATGTACGGAGATGGCAGAACTAAAACCATTGTTTCCGGCCGCCTGAACTTCATCGATGGCACTCCTACCTTCTCCACCGCCACTTTCGCTGTTGCTGGCAAAGGGTTCATTGGGAAGGACATGGGGTTCATCAACACGGCCGGTCCAGCCAAGCACCAGGCTGTTGCCTTCCGGTCAGGCTCCGACCTTTCTGTGATATCTGGATGTTCATTTGATGGCTATCAAGACACTCTCTACGCCCATTCAAACCGTCAATTCTACCGAGACTGCGACATCACTGGCACCATCGACTTCATCTTCGGCAACGCCGCCGTGGTGTTCCAGAACTGCAACATCCGGCCAAGGCAGCCACTTCCCAACCAATTCAACACCATCACAGCCCAAGGCAAAAAGGACATCAACCAAAACTCCGGCATTTCGATTCAGAAATGCACTTTTTCGGCCTACAACGACAATCTCGCCGCACCCACTTACTTGGGGCGGCCATGGAAGGAGTTTTCCACCACCGTGATTATGCAGTCAGAGATCGGAGGATTCCTGCAGCCCGTAGGGTGGAAGGAATGGGTCAGCGGGCAGGACCCACCCAGCAGCATATTTTATGGGGAGTATCAGAATAGTGGACCAGGATCTAACGTGGACAAGAGGGTCAAATGGGCCGGTTACAGGCCCAGTCTTACAGACGCCGAGGCCGGAAAGTTCACTGTCGGGACCTTCCTAAACGGCGAGGATTGGTTGCCGGCCACCAGTGTAAAGTTTGATACATCATTGTGATAAACACAGAGAAGAAAAACCACACGCTGAAGATTTGAATTTTTTTTTTTTTTCTGTTTTTTGGTTGAATTTTTCTTGCCCCCATCTTCTTTTGTTACAGCAAATGTGAAGGAAGATTATATATATTTAA 2025 48.49 MDTVKSFKGYGKVDELEQQAFRQKTRRRLIILLVSIVLLIALVIAAVVGIVIHKRNSSSSSATSSPPPTELTPLASLKTLCSVTQYPSSCQSSLENSNTTDPVFLFKLSLRVATDSLSKLSDYTSNLNSNTEDPKLKAAIEICRSVFEDAIDTLNDTVSSMEVDRHNEKFLSPSRIDDLKTWLSTTITDQETCLDALRDLNQTTVLQNLQTAMANSTEFTSNSLAIVTKILRLLADFDIPIHRKLMGFPDWVSSGDRRLLQENNVTAHVTVSKDGKGNYTTIKDAVAAVPKKSKQRFIIYVKEGLYEENVILDKSKWNVMMYGDGRTKTIVSGRLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAGPAKHQAVAFRSGSDLSVISGCSFDGYQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIRPRQPLPNQFNTITAQGKKDINQNSGISIQKCTFSAYNDNLAAPTYLGRPWKEFSTTVIMQSEIGGFLQPVGWKEWVSGQDPPSSIFYGEYQNSGPGSNVDKRVKWAGYRPSLTDAEAGKFTVGTFLNGEDWLPATSVKFDTSL 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 70226331 70228853 + XM_039022018.1 Bhi01g02829 25602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02829 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 230 IPR035513 -
Bhi01g02829 576 Pfam Plant invertase/pectin methylesterase inhibitor 77 226 IPR006501 GO:0004857
Bhi01g02829 576 Pfam Pectinesterase 268 561 IPR000070 GO:0030599|GO:0042545
Bhi01g02829 576 SUPERFAMILY Pectin lyase-like 266 572 IPR011050 -
Bhi01g02829 576 SMART PMEI_2 72 226 IPR006501 GO:0004857
Bhi01g02829 576 PANTHER PECTINESTERASE 8 573 - -
Bhi01g02829 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 61 230 IPR006501 GO:0004857
Bhi01g02829 576 PANTHER PECTINESTERASE 1-RELATED 8 573 - -
Bhi01g02829 576 Gene3D - 262 576 IPR012334 -
Bhi01g02829 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 231 IPR035513 -
Bhi01g02829 576 CDD PMEI-like_3 79 232 - -
Bhi01g02829 576 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02829 Bhi-Chr1:70226331 Bhi08g01024 Bhi-Chr8:33487966 1.43E-162 dispersed
Bhi08g02011 Bhi-Chr8:57960388 Bhi01g02829 Bhi-Chr1:70226331 4.25E-41 dispersed
Bhi01g02829 Bhi-Chr1:70226331 Bhi12g02036 Bhi-Chr12:63545398 3.07E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02829 - - csv:101207508 1044.26