Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02834 GTGTTGTATAGAAAATGTTGAATGTGGCGCCATCCTCATTTCTTTATCCTTCAAATTCACCAATTTCTTGTTGAATTCGGGTCCATTTTTCTATTCTTTAATCTTGATTCTTGACATACCCTCTTCATATTCAACATTCAAATCACTTCATTTCTTCCAAATCCCTTAAAATACGTAAAGATTCTGTAAATATACACACTATAAACCACACAATTAACTGAAAATTCAGCCGAGCCATCCGCCAGTGCAACTTTACTCCACTTCCTGGTTCTGAATTCGTGCAGATGCGGCCGTATGAGGAGAAAACAACAAGCTTCAGCTTTGCTTCTTTGACGGAAACTTGAAGAATCAGTTCATCAATCCAATCCAAGATAATAAAAAAACGGAACCCAAATTACGAACAAGACAAGGGTTGAAATCTTATACGAACAATTTTCGTTAAATCCGTGCTTTGTGGGCACCCAATTAACGCAAATTTCTGGATTTGGATCTGATTTTGTTTACAAATTTCATACAAGACAGAGAATAAAAAGGGCGAGGGGAAGTAAATTTGGAAGGCGATGAGTTGTTTTCTTGATTGGATTGGAATCGCAGTTTGTGGGAAAGACTGTGATATAAACCTTTCCCTTTTCTTGTTGGGTTTAATGTGTTTTGAATCTTTTGATATGTTTGACTTCCGGTTTCGAGATGTGGGAATGTTTTTATCTGACACCCATTTATTTAACAGAAAGGAACTAATTATTTGATTTAATTTTTGGCAACTGTGTGAGCTTTTGATTTTCTTGTTTATTGCGTGGAATGTGGATAGGGAGAAAGGTAAGAATATTTCTTATTTCTAATTTTTTTTTCATCGATTTTTTATTGATGTGAATTTTAAGGCCCTAGGGTTCACTTTTCGGGCTCCAGTCTTCTATCGCTGCCCAAATTTCTTCCCCTTTCGTATGATTTTTAGGAGTTACGGACTCTGTCTTGTCTTGTTCGTCGATTTTTCTTCATCTCATCGTTCTGGGTGTTCAAATTTCCTTGATTTTTCCATTCGCTTGGTGGGTTCTCCGGTTTCTGTTGTCTGAAGCGCTGAATTTCCTCTCGCTCCTTCTGCTGGTGACTGTACATGTTGGTCATAGTTGGAGATTTTTAACGGATAGGGTTTGAGTTCTTAATAAGTCCTGCATTCAGTTTTGCAGAAATTTTGTGCTGAACTGGGTGATTTTTAGGGTTTAATTGTTGGTCCGGTAAGAATTAAAGGGTCCGGACGGCTGTGATTTTGATCTTAAAGCCCGTCCCCCTGAGGGGCTTTAGGATGATGGCATTGTTTCAACCTCAGAATGAAAATTCAGGTTCTTTACTTCTATGTCATGGGATATGGGTATTGGTCTCTCAGATTTTTAACTGATGTCAGGGCATTGGGGCTCTGTTTTAGCGAATGTTTGTGTTCTAATGGTTCCAAAAGCAAGTTGAAAGATCTCATTGCTTGAGGAAGTCCGCTTAATGCAATTTTCCCCCGGATCTTCTTGTAAACGATGCTTCATTCCGTAGTAGCTGCTAGACAGACTTGTAGCCTACTTGCTGTCACCTGCGGAAGTGTACCTAAAATAAAATGTGAGGAGGAAGTTGATGAGGATAAGTTGAGATATCCGTTTCCAGAATTAGTTTCTTCCGGACGATTGGAGGTTCGAGTTTTGGCAAATCCAAGCAAGGATGAATTCAGTAGAATTGTGGAATCATATCTACCGAGCTTCGTCTACTTGCAAGGGGAACAACTTGGAAATGATGAAATTGGGTCTTTGGTTTGGAATGGTGTTGATTTATCTCTTGAAGATTTATGTGGACTATTCAATACTACACTACCAACCATTGTGTATTTAGAAATTCCAAATGGAGGCAGAATAGCGGAGGCTCTTCATTCTAAGGGAATTCCTTACCTCATGTATTGGAACAGTACATTTTCATGTTATGCTGCAGCTCATTTTCGTAATGCATTGCTTTCAGTGGTGCAGAGTTCATCTACTCATACATGGGATGCTTTTCAGCTTGCACGTGCTGCTTTTAAGCTTTATTGTGTGGGGAGCAATTACGGTCTGCCTGGGATTGCTGATGACAGTATTATGAGTGATCTAGAGCCACAGCTTATTGGGGAACCCCTAAAGATTAATGTAGAACCCCCCGAGGTAGATGCAGGTGAAGGTGAAGATGGAGATGGTTCTTTAGAAACCCTCCCAGCCATAAGTATTCATGATAACAATGTGACCGTGAGATTTCTTATCTGTGGAGTGCCTTGCACACCGGATGCCTGCTTATTGAGATCATTGGAGGATGGTCTTAATGCGCTTTTGAACATTGAAATACGTGGGAGTAAACTTCAGGGAAAGTTCAGTGCTCCTCCACCACCTCTTCAAGCAGGATCCTTTTCTCGTGGGGTTGTGACAATGCGATGTGATATAGTGACTTGTAGTTCAGCCCACATCTCAATATTGGTGTCTGGTAGTGCTCATACTTGTTTTGATGATCAGCTCTTGGAGAAACATATCAAACATGAGATTATAGAAAACAACCAATTAGTTCATGCTATGCATGATTGTGAAGGCAACAAACATCACATGCACGAGCCTCGAAAATCTGCTTCAGTTGCCTGTGGGGCAACAGTATTTGAGGTTTCCATGAAGGTTCCTGCTTGGGCATCACAGGTCTTGAGGCAACTTGCGCCTGACATGTCGTACCGGAGTTTAGTTGCACTCGGCATTGGGGGAGTTCAGGGTTTACCTGTTGCTTCTTTTGAGAAAGAGGATGCCGAGCGACTGCTCTTCTTTTGTTCAGGGGATGAGAATGATAAACATTCAGAGCAGTTGCTTGTGAGCGTATTACCCAGCTGGTTTAAGCCACCTACTCCTAGTAGAAAGAGAGTAGAACCAAGCCAAGGAATAAGGAGCACTCTTTCACACGACAGTCTTGCATATGCAAACATCCCTTCCATTAGAAGAGTAGCTAGAGAGGAGCCTGCACCAATGAATGGGTTCAAGGCACCCTTACTGCCAACGAGGAAAAGATTAAAAGTAGCCTCCATGAGGCCTGTTCCACGTGTGCATAGGAATAAAATAACGCCTTTCTCTGGATTGGCTGAAGTAGATTGGAACAACGGAAGCCTATCCAAGGCTAGTTTACCTGTTGTTACCCCGTCAAAGCATGTTACTGTAGGATCAACTTCTGCAACACACAGGAAATCTTTTTCAAGCTCATCTCAGTCTAAGCAGATTATTTCCTTGAACCCACTGCCTCTAAAGAAGCATGGTTGTGGAAGAAACCCAATTCAAGATTGCTCAGAGGAGGAGTTTTTGAAGGATGTTATGGAGTTTTTACTACTTAGAGGACATTCACGACTTATTCCTCAAGGTGGACTTGAGGAGTTTCCAGATGCCATACTCAACGGGAAGCGTCTTGACCTCTATAACTTGTATAAGGAGGTGGTCACCCGAGGAGGCTTTCATGTCGGCAATGGTATCAACTGGAAGGGGCAGATATTCTCTAAGATGCACAATTACACAATGACCAATAGAATGACTGGTGTTGGAAATACATTGAAAAGACATTATGAGACTTACCTTCTAGAATATGAATTGGCTCATGATGATGTAGATGGAGAATGCTGCCTTTTGTGCCACAGTAGTGCAGCAGGGGATTGGGTGAACTGTGGCATTTGTGGTGAATGGGCCCATTTCGGGTGCGATCGAAGGCAGGGTCTAGGAGCATTTAAGGATTATGCCAAAACAGATGGGCTAGAGTATGTTTGTCCACATTGTAGCATTACAACTTACAAGAAGAAACCACACAGAGTAGCAAATGGGTCTCCACAAGGAATAACGAATCCACGGATACCTTGATTCAGTTTTTGGCCTCCCTATCTTGAGGTTTCGGCTGCGTTGTTTTTCTTTTTTCTTTTTGCCTATTCTTATCCTACACGAGAAATTATTCATTCCATCGGCTCGTAGATGAGTTTTGTTTGAGGTGGTGTGCTGCTAAACCAACCATTAGCTGAAGATTGAATTTATGAGACTGAGGATGAAAACTCTGAAGTGAAGAAGAGAACTAAAGAGACTAGAGCACACAAAGAGGACTTCATCATAGGTTCTTTTTTGACCTCTTGTTTGTCTAGGTAATAGTTTAGGAGTAAAGTTAGAAGCAGCATGGCAGTTAACTTTAGTAGGGTGCTGTAAAATACTTCTATTCTTGTAGCTAAGCCATGACTGATGTATTTTAATGGAAGATATCTAATTTACAATTTTTTGTATATGATTGATCCAAGAAAAGTAGATCAATTATCACTACTTCACATGCATTTCAAAACTTTACAAGTGATCAAA 4355 40.92 MLHSVVAARQTCSLLAVTCGSVPKIKCEEEVDEDKLRYPFPELVSSGRLEVRVLANPSKDEFSRIVESYLPSFVYLQGEQLGNDEIGSLVWNGVDLSLEDLCGLFNTTLPTIVYLEIPNGGRIAEALHSKGIPYLMYWNSTFSCYAAAHFRNALLSVVQSSSTHTWDAFQLARAAFKLYCVGSNYGLPGIADDSIMSDLEPQLIGEPLKINVEPPEVDAGEGEDGDGSLETLPAISIHDNNVTVRFLICGVPCTPDACLLRSLEDGLNALLNIEIRGSKLQGKFSAPPPPLQAGSFSRGVVTMRCDIVTCSSAHISILVSGSAHTCFDDQLLEKHIKHEIIENNQLVHAMHDCEGNKHHMHEPRKSASVACGATVFEVSMKVPAWASQVLRQLAPDMSYRSLVALGIGGVQGLPVASFEKEDAERLLFFCSGDENDKHSEQLLVSVLPSWFKPPTPSRKRVEPSQGIRSTLSHDSLAYANIPSIRRVAREEPAPMNGFKAPLLPTRKRLKVASMRPVPRVHRNKITPFSGLAEVDWNNGSLSKASLPVVTPSKHVTVGSTSATHRKSFSSSSQSKQIISLNPLPLKKHGCGRNPIQDCSEEEFLKDVMEFLLLRGHSRLIPQGGLEEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMHNYTMTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSITTYKKKPHRVANGSPQGITNPRIP 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 70385863 70392980 + XM_039027960.1 Bhi01g02834 25607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02834 784 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 767 IPR013083 -
Bhi01g02834 784 SUPERFAMILY FYVE/PHD zinc finger 693 761 IPR011011 -
Bhi01g02834 784 CDD ARID 599 697 - -
Bhi01g02834 784 SUPERFAMILY ARID-like 597 712 IPR036431 GO:0003677
Bhi01g02834 784 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 2 773 IPR042293 -
Bhi01g02834 784 CDD PHD_ARID4_like 707 758 - -
Bhi01g02834 784 Gene3D - 594 697 IPR036431 GO:0003677
Bhi01g02834 784 ProSiteProfiles ARID domain profile. 597 701 IPR001606 GO:0003677
Bhi01g02834 784 Pfam ARID/BRIGHT DNA binding domain 600 697 IPR001606 GO:0003677
Bhi01g02834 784 SMART ARID_2 594 697 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02834 Bhi-Chr1:70385863 Bhi09g00271 Bhi-Chr9:5626692 0 dispersed
Bhi01g02834 Bhi-Chr1:70385863 Bhi01g02835 Bhi-Chr1:70385863 0 tandem
Bhi01g02834 Bhi-Chr1:70385863 Bhi09g00270 Bhi-Chr9:5626692 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
271 PF01388 ARID 7.30E-14 CL0123 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02834 - - csv:101215769 1494.18