Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g02968 ATGGCTAATCGGGGAGGAGGGTCGTTTTTACCCTCAAATGTCTCGACTCAAGGTTGGCGAAGAGATGAACTTTATATTGAGCTATGGAGGGTCTCGGCTGGGCCTCTTGTGGAAATTCCTCGAGTTAATGAGAAGGTTTTATATTTTCCTCAAGGTCACATGGAACAGTTGGAGGCATCTACAAATCAGGAGCTAAATCAGAAACTTCCTTTGTTTAATCTTTCCTCAAAAATTCTCTGTCGAGTAGTTGATATCCGGCTGCTGGCAGAGCAGGACTCAGATGAGGTTTATATACAGGCAACTTTAATGCCAGAAGCAAATCAAGAGTTACCTACAATTCCTGATCCTTCACCCCCAGAGTGTCGAAAAGCAAAAGTCCATTCATTTTGCAAGGTCTTAACTGCTTCTGATACTAGCACCCATGGCGGGTTCTCCGTGCTTCGGAAACATGCCACAGAATGCCTGCCTCCATTGGATATGACCCAGCAGACCCCAACTCAGGAACTCGTAGCCAAAGATCTTCATGGTTATGAGTGGCGATTCAAGCATATATTTAGGGGTCAGCCACGAAGGCATTTACTGACGACCGGATGGAGCACCTTTGTTACTTCTAAGAGACTAGTTGCTGGAGATTCTTTTGTGTTCTTGAGGGGGGAAAATGGGGAATTGCGAGTTGGAGTGAGGCGTCTTGCTCGCCAACAAAGCAGCATGCCTTCGTCTGTGATTTCGAGTCACAGCATGCACTTAGGAGTGCTTGCTACTGCATCTCATGCCGTGTCGACTCAAACTCGCTTTGTTGTCTATTATAAGCCAAGGGCAAGCCAGTTTATCGTTAGCTTGAATAAGTACATGGAGGCAATGAACAATAAGTTCTCGGTTGGGATGAGGTTCAAGATGAGGTTTGAGGGAGAGGAGTCTGCAGAGAGAAGGTTTTCGGGTACCATAGTTGGAGTTGACGACATGTCTTCTCATTGGCCCAATTCAGAATGGCGATCTCTGAGAATTCAATGGGATGAACTTGCATCTATCCAGAGACCTGATAGAGTTTCACCATGGGAGATTGAACCTTTTGTAGCTCCTGCGTCCCCAAGCATTCCGCACTCTATTCCCGTAAAGAATAAAAGGCCTCGGCCTCCACTTGAAATTCAAGATTCTGATAATTCAACTGTAACAACTCTACGACACCCAGGATCAACTCAATCACATGATGATAGAACACAGCTGACTGTTGCTGCTGCTGAAATTAAAAGATTTGAAAATCATGCAACATGGCATTACAAGCAAACAGATGTTAGCAGCAATGAAAATTCTGTATCAAGGACGGCAATGGAGGGCTCTTGGTTAACATCCCCAAGTGGCTGTGTTTCTCAGCATCGGTTACAGGATTTGACAGATGATCGTAAAAGCAGTTCTGTTTGGACGACGGTCTTCCCAGGAGCACCAGCAGCACACTTGACATGTCCAACTCCACGCTCATCAAATCCAAAGAGTGACCAAATACGTGACCTTGGGGAAAAGGGGAGGAAAACTGAGGTGGCTTCAAGCTGTCGCTTGTTTGGGATCGAACTCATCAATCATTCTAAGAGCCCGATTCCTCCTGAAAGGTCAACTGATCAACCAATGAGCACACCAAAAGAAATCACTGATGCAGAGCAGAACTCAAACCAGCCAAAGGTTTCTAAAGAAAGAAAATTAGGACTCTTACAAGTACCTCCTAAAGAGATCCAGCACAAGCAGAACAGCTCGACCAGCAGCCGAAGCCGTACCAAGGTTCAAATGCAGGGGATGGCTGTTGGACGTGCGGTAGACCTTACCACATTGGAGGGGTATGTTCAACTCATTGATGAACTGGAGAAGATGTTTGATATCAAGGGAGAACTCCGCCCTCGTAATAAGTGGGAGATTGTTTTCACTGACGACGAAGGAGATACGATGCTCATGGGCGATTACCCGTGGCAGGAATTCTGTAACATGGTGAGAAGAATATATATATGGTCAAGTCAGGATGTGAAAATGGGTTCAGGTAGCAAACTTGCAATGTCTGCAATCGAATGTGACGGGACAGTAATAACCTCAGAGTCGGCTGACAGCTGAAGCTGGAAGTACATCGCTTCGAAACTTAAATAATCTTTTGGGTTGGGGGGAAATTGGGGGGCTGTGGTGAGAGTTGTTCAAGTCTTTTGTTGTTTGTCTATGGAAAAAAAAAACTGGTTCCAAATTTGATCGAGAGGGGGGGGGTTGGGTTGGGTTGGGTTGGGTGGGGTTGGGGACACAGCACAGAGATACATGAGATAATCTTTGGCTCATTTTCAAAATGCTTTTGGAAGAGAGGTGAAGATTAGAATTTGAAAAACTTTGTTCATTAATGATGAGTGGGTTGGAAAATGTAGAGGTTATGGAGTGAGTAGCCTTTGCTTCTTCTATTTATGTAAATATACCCATTTTGTCAAATGTAAAACTTTATCTTCTAGACTA 2475 44.81 MANRGGGSFLPSNVSTQGWRRDELYIELWRVSAGPLVEIPRVNEKVLYFPQGHMEQLEASTNQELNQKLPLFNLSSKILCRVVDIRLLAEQDSDEVYIQATLMPEANQELPTIPDPSPPECRKAKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLNKYMEAMNNKFSVGMRFKMRFEGEESAERRFSGTIVGVDDMSSHWPNSEWRSLRIQWDELASIQRPDRVSPWEIEPFVAPASPSIPHSIPVKNKRPRPPLEIQDSDNSTVTTLRHPGSTQSHDDRTQLTVAAAEIKRFENHATWHYKQTDVSSNENSVSRTAMEGSWLTSPSGCVSQHRLQDLTDDRKSSSVWTTVFPGAPAAHLTCPTPRSSNPKSDQIRDLGEKGRKTEVASSCRLFGIELINHSKSPIPPERSTDQPMSTPKEITDAEQNSNQPKVSKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYVQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDTMLMGDYPWQEFCNMVRRIYIWSSQDVKMGSGSKLAMSAIECDGTVITSESADS 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 73686323 73690224 + XM_039050233.1 Bhi01g02968 25741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g02968 697 Pfam Auxin response factor 255 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi01g02968 697 Pfam AUX/IAA family 562 622 IPR033389 -
Bhi01g02968 697 Pfam AUX/IAA family 633 669 IPR033389 -
Bhi01g02968 697 CDD B3_DNA 127 229 IPR003340 GO:0003677
Bhi01g02968 697 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Bhi01g02968 697 Gene3D - 290 361 - -
Bhi01g02968 697 SUPERFAMILY CAD & PB1 domains 580 662 - -
Bhi01g02968 697 MobiDBLite consensus disorder prediction 527 561 - -
Bhi01g02968 697 Pfam B3 DNA binding domain 129 229 IPR003340 GO:0003677
Bhi01g02968 697 Gene3D - 581 673 - -
Bhi01g02968 697 PANTHER AUXIN RESPONSE FACTOR 9 19 684 - -
Bhi01g02968 697 MobiDBLite consensus disorder prediction 365 404 - -
Bhi01g02968 697 SUPERFAMILY DNA-binding pseudobarrel domain 122 258 IPR015300 -
Bhi01g02968 697 MobiDBLite consensus disorder prediction 382 404 - -
Bhi01g02968 697 ProSiteProfiles PB1 domain profile. 586 667 IPR000270 GO:0005515
Bhi01g02968 697 MobiDBLite consensus disorder prediction 530 555 - -
Bhi01g02968 697 MobiDBLite consensus disorder prediction 483 511 - -
Bhi01g02968 697 Gene3D - 126 230 IPR015300 -
Bhi01g02968 697 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 684 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi01g02968 697 SMART B3_2 129 231 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02968 Bhi-Chr1:73686323 Bhi12g00123 Bhi-Chr12:3921637 0 dispersed
Bhi01g02968 Bhi-Chr1:73686323 Bhi03g00112 Bhi-Chr3:2995513 1.83E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
281 PF02362 B3 6.90E-22 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g02968 K14486 - csv:101213942 1241.87