Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03003 TGTTCTTCGTTTTTCAATCTGAAATCAATATGTAATCTATTGTTAAATCCACACTCAAAATTTCTCTCTACTTGGGTTCCTTTCATTTGCTTTGCTTTGCTTAGCATTTGGATAATCAATTATCAATACACCAAGAAAGGGACTCCATTTCCACATCTCTGCTCTGCAAGTTACTTTGTCTCTTTCTCCCATCTACTCATCACTATATGCGTCCCAATCCCACGCTTTCCCCTTTTTCTTACTTTCCCAATTCTTCTTATTCTTTCCCTTTAATCTTACATTCATCTCTAATCTTCTAGATCTGGGTTGTTCCAATCTTCCCATTTTCCCTCTTTTTTCATGGAGTAATCATCGCCCTTGCTTCCGAGGGATGGGATCCAGTGGAAGTAAATCGTCGAGTAATTCGCTGCCGGCGCCGGAGACTCCCTCGTGTTCTGGCAGAATCCGGAGGGGGAGATCCAAAGGCCGGAGAGTTTTTCGGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTCTGAAAGTGAGAACAAAAAGAATGCTCACGATTATTCATCTGCAAATCAGACTGCTCAAGCATTAGATCAGATGAAAGTTGAGGGTTACAGAAGGGTTAAAGCTGAGGAATCTGTTGAAATGCCTTGCATATCATCGAACGTTGAGCTGGATGGATGGGATCAAGCAGGTGTTGCTGTTACAGCCCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCTTCCCTGCAATCGTTGAACCCTTCGAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATGTAAGCTTCAGAATTAGTAGAGCAAACAGTTTAGGATCATCTAGATCTTATCCTGTGTCTTCAACAAATCTCTCAATGTTGAATAATGAAGACGAGCCTCATTTATCAGATAGGCCCGCTAGAGGCATGGGTGGTCAAGATGAAACTCAGCAAGGTAGGGACTTGCTTCCTGCATCACTAGCTAGTGAAACTCATACTCAGTGTTATGGAGATAGTCCTGCTAATTTTAGGTTAAATACACAACCTTCTGGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTTCTTCTACCCATGACATGGCTGGTGCTTGCGATAATTCTAGAGTAGGGCCAGATGGAGACCTTTCCCATCCTCGAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCAGATAGACGGACTGGATCTAGGGAACCGGTTGACCGCAATTTTCGTTTCAGTCGGACACTTAGTGTTGGAAGACTCCGCGATAGAGTTCTTCGTAGATCATCGTTATCTGACTTCACATTTTGTCCTCCTCAACAAGAGGGAGATGAGAGAGATGCAAGTCACAGTGGCGATGACCAACATGTATGGACTGCCGAGACAAGGGCTTTGGCATCTGAAGATAATGTTATGACCTCGCCAACAACATCAGGTTTTCCAGCTTCTAGTCTATCCAGTTCCCTGTTCAGCACCCAAGATTTTGAAGTGGAAACTACCCGACCTAGAGAAGCTAGATATCATGATTTGCTGGAACATAGGTCAAATTTCCTCGAACGTAGAAGAAGAATACGGTCCCAGGTTCGTGCCCTACAGCGGCTGGGAAGTCGCTTTGAGAACCTATCTGGGCATGAGAGATCATGTATATTATCCGGTCAACATAGAACCGGGCATTGTACTTGTCGTATCAATAATCGTGACACAAATACGAACGATAACACCAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGCAATCTGTAGTTTTATCCTCCCGCCCCGCATCTTCTATTGGCTCTCTGCCTGCACCAAACGATGTTGTAGATTCTTTGCCGGTTAAATTTTATTCCAAGTTGCAAAAGCATCAAAGCGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGAGGAAGGAGATAGCATGAGAGTGTTGCCTTGCCTTCATGAGTTTCACGCAGCATGTGTTGACAAGTGGCTGAAGGAGATCCACAGGGTATGTCCACTCTGTCGAGGGGATATATGCAGCAGATCTGATGCGTTATCAGACGACATCAAGTGAAAGCGATTCATTTCCAAAGCCTGCTGTCTTCTGTATATCCTTAGAAATCTTGGAGTGATGGTTGGTAGCTAGAAAATTTTAAGCGGAAAGATGATGGGTTTGAAAATTTTACTGAAATTCAGGTTTTTGTTCTATAGTTTGTGGTGCCTTTTTATAAAAATCAACTTAATAGAGTGTTCTACTGGGAATGGATTCAATCAGTTGAGCAAATTGTTTTCACAGAGAAATATCAAATATATTAGCTTTTCTCTT 2368 43.07 MGSSGSKSSSNSLPAPETPSCSGRIRRGRSKGRRVFRSACLGTPSGSHHSDNDDNDSESENKKNAHDYSSANQTAQALDQMKVEGYRRVKAEESVEMPCISSNVELDGWDQAGVAVTAPRAGSTSARVSSLQSLNPSSNFLSRFSFIPGNVSFRISRANSLGSSRSYPVSSTNLSMLNNEDEPHLSDRPARGMGGQDETQQGRDLLPASLASETHTQCYGDSPANFRLNTQPSGLSDNLQDNQSVSSTHDMAGACDNSRVGPDGDLSHPRTLPENESSEIRQSDRRTGSREPVDRNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEGDERDASHSGDDQHVWTAETRALASEDNVMTSPTTSGFPASSLSSSLFSTQDFEVETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNTNDNTSARASISRIVMLAEALFEQSVVLSSRPASSIGSLPAPNDVVDSLPVKFYSKLQKHQSEEAAQCYICLVEYEEGDSMRVLPCLHEFHAACVDKWLKEIHRVCPLCRGDICSRSDALSDDIK 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74856390 74860315 + XM_039019732.1 Bhi01g03003 25776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03003 581 SMART ring_2 524 565 IPR001841 -
Bhi01g03003 581 Pfam Ring finger domain 523 566 IPR001841 -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 330 344 - -
Bhi01g03003 581 ProSiteProfiles Zinc finger RING-type profile. 524 566 IPR001841 -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 353 373 - -
Bhi01g03003 581 SUPERFAMILY RING/U-box 502 572 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 321 373 - -
Bhi01g03003 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 486 571 IPR013083 -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 215 293 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 162 180 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 1 18 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 1 78 - -
Bhi01g03003 581 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 573 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 215 253 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 269 293 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 49 65 - -
Bhi01g03003 581 CDD RING-H2_PA-TM-RING 523 566 - -
Bhi01g03003 581 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03003 Bhi-Chr1:74856390 Bhi01g03005 Bhi-Chr1:74856391 0 dispersed
Bhi10g01277 Bhi-Chr10:29750475 Bhi01g03003 Bhi-Chr1:74856390 3.10E-11 dispersed
Bhi11g00302 Bhi-Chr11:6944737 Bhi01g03003 Bhi-Chr1:74856390 3.61E-10 dispersed
Bhi01g03003 Bhi-Chr1:74856390 Bhi01g03004 Bhi-Chr1:74856390 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03003 - - csv:101213468 1002.66