Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03005 GTTCTTCGTTTTTCAATCTGAAATCAATATGTAATCTATTGTTAAATCCACACTCAAAATTTCTCTCTACTTGGGTTCCTTTCATTTGCTTTGCTTTGCTTAGCATTTGGATAATCAATTATCAATACACCAAGAAAGGGACTCCATTTCCACATCTCTGCTCTGCAAGTTACTTTGTCTCTTTCTCCCATCTACTCATCACTATATGCGTCCCAATCCCACGCTTTCCCCTTTTTCTTACTTTCCCAATTCTTCTTATTCTTTCCCTTTAATCTTACATTCATCTCTAATCTTCTAGATCTGGGTTGTTCCAATCTTCCCATTTTCCCTCTTTTTTCATGGAGTAATCATCGCCCTTGCTTCCGAGGGATGGGATCCAGTGGAAGTAAATCGTCGAGTAATTCGCTGCCGGCGCCGGAGACTCCCTCGTGTTCTGGCAGAATCCGGAGGGGGAGATCCAAAGGCCGGAGAGTTTTTCGGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTCTGAAAGTGAGAACAAAAAGAATGCTCACGATTATTCATCTGCAAATCAGACTGCTCAAGCATTAGATCAGATGAAAGTTGAGGGTTACAGAAGGGTTAAAGCTGAGGAATCTGTTGAAATGCCTTGCATATCATCGAACGTTGAGCTGGATGGATGGGATCAAGCAGGTGTTGCTGTTACAGCCCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCTTCCCTGCAATCGTTGAACCCTTCGAGTAACTTCCTTTCTCGCTTTAGTTTCATTCCTGGTAATGTAAGCTTCAGAATTAGTAGAGCAAACAGTTTAGGATCATCTAGATCTTATCCTGTGTCTTCAACAAATCTCTCAATGTTGAATAATGAAGACGAGCCTCATTTATCAGATAGGCCCGCTAGAGGCATGGGTGGTCAAGATGAAACTCAGCAAGGTAGGGACTTGCTTCCTGCATCACTAGCTAGTGAAACTCATACTCAGTGTTATGGAGATAGTCCTGCTAATTTTAGGTTAAATACACAACCTTCTGGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTTCTTCTACCCATGACATGGCTGGTGCTTGCGATAATTCTAGAGTAGGGCCAGATGGAGACCTTTCCCATCCTCGAACTCTACCTGAAAATGAAAGCAGTGAGATTAGACAATCAGATAGACGGACTGGATCTAGGGAACCGGTTGACCGCAATTTTCGTTTCAGTCGGACACTTAGTGTTGGAAGACTCCGCGATAGAGTTCTTCGTAGATCATCGTTATCTGACTTCACATTTTGTCCTCCTCAACAAGAGGGAGATGAGAGAGATGCAAGTCACAGTGGCGATGACCAACATGTATGGACTGCCGAGACAAGGGCTTTGGCATCTGAAGATAATGTTATGACCTCGCCAACAACATCAGGTTTTCCAGCTTCTAGTCTATCCAGTTCCCTGTTCAGCACCCAAGATTTTGAAGTGGAAACTACCCGACCTAGAGAAGCTAGATATCATGATTTGCTGGAACATAGGTCAAATTTCCTCGAACGTAGAAGAAGAATACGGTCCCAGGTTCGTGCCCTACAGCGGCTGGGAAGTCGCTTTGAGAACCTATCTGGGCATGAGAGATCATGTATATTATCCGGTCAACATAGAACCGGGCATTGTACTTGTCGTATCAATAATCGTGACACAAATACGAACGATAACACCAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCCGCATCTTCTATTGGCTCTCTGCCTGCACCAAACGATGTTGTAGATTCTTTGCCGGTTAAATTTTATTCCAAGTTGCAAAAGCATCAAAGCGAGGAAGCTGCCCAATGCTACATATGCCTGGTCGAGTACGAGGAAGGAGATAGCATGAGAGTGTTGCCTTGCCTTCATGAGTTTCACGCAGCATGTGTTGACAAGTGGCTGAAGGAGATCCACAGGGTATGTCCACTCTGTCGAGGGGATATATGCAGCAGATCTGATGCGTTATCAGACGACATCAAGTGAAAGCGATTCATTTCCAAAGCCTGCTGTCTTCTGTATATCCTTAGAAATCTTGGAGTGATGGTTGGTAGCTAGAAAATTTTAAGCGGAAAGATGATGGGTTTGAAAATTTTACTGAAATTCAGGTTTTTGTTCTATAGTTTGTGGTGCCTTTTTATAAAAATCAACTTAATAGAGTGTTCTACTGGGAATGGATTCAATCAGTTGAGCAAATTGTTTTCACAGAGAAATATCAAATATATTAGCTTTTCTCTT 2388 43.09 MGSSGSKSSSNSLPAPETPSCSGRIRRGRSKGRRVFRSACLGTPSGSHHSDNDDNDSESENKKNAHDYSSANQTAQALDQMKVEGYRRVKAEESVEMPCISSNVELDGWDQAGVAVTAPRAGSTSARVSSLQSLNPSSNFLSRFSFIPGNVSFRISRANSLGSSRSYPVSSTNLSMLNNEDEPHLSDRPARGMGGQDETQQGRDLLPASLASETHTQCYGDSPANFRLNTQPSGLSDNLQDNQSVSSTHDMAGACDNSRVGPDGDLSHPRTLPENESSEIRQSDRRTGSREPVDRNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEGDERDASHSGDDQHVWTAETRALASEDNVMTSPTTSGFPASSLSSSLFSTQDFEVETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTGHCTCRINNRDTNTNDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSIGSLPAPNDVVDSLPVKFYSKLQKHQSEEAAQCYICLVEYEEGDSMRVLPCLHEFHAACVDKWLKEIHRVCPLCRGDICSRSDALSDDIK 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74856391 74860315 + XM_039019719.1 Bhi01g03005 25778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03005 588 ProSiteProfiles Zinc finger RING-type profile. 531 573 IPR001841 -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 330 344 - -
Bhi01g03005 588 CDD RING-H2_PA-TM-RING 530 573 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 353 373 - -
Bhi01g03005 588 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 493 578 IPR013083 -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 321 373 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 215 293 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 162 180 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 1 18 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 1 78 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 215 253 - -
Bhi01g03005 588 SMART ring_2 531 572 IPR001841 -
Bhi01g03005 588 Pfam Ring finger domain 530 573 IPR001841 -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 269 293 - -
Bhi01g03005 588 SUPERFAMILY RING/U-box 509 579 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 49 65 - -
Bhi01g03005 588 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 580 - -
Bhi01g03005 588 MobiDBLite consensus disorder prediction 162 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03003 Bhi-Chr1:74856390 Bhi01g03005 Bhi-Chr1:74856391 0 dispersed
Bhi01g03005 Bhi-Chr1:74856391 Bhi11g00362 Bhi-Chr11:8666553 6.90E-13 dispersed
Bhi01g03004 Bhi-Chr1:74856390 Bhi01g03005 Bhi-Chr1:74856391 0 tandem
Bhi01g03005 Bhi-Chr1:74856391 Bhi01g03006 Bhi-Chr1:74856391 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03005 - - csv:101213468 1023.46