Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03027 CTTTCATTCTTCATATTATTTATACACTTTTCTTCTTGTATTCCCTTCTCCATACTCCACACATAGGACCAATGAATAATATTATGAAGTATAATCATGTCCTCACCAATCTTGCTTTATCATCTCTTCTCCCTCTCCTTGCTTTCCTCTTCATGATTAAGCCCACCCCTCCCTTCCTTTCCAATCTTGTCATCTTTCGCGACTCCATCGGCTGTCATCACCATCACCATCATCACCACCACCACCATCATCGCCGTCATCATAAAAACGCAGCCGACGAAGAAGACCAAGCAGCCATAAGTTCCATTTGTGATACCTTCCCGATCACCCTCCTCCCACCAGAAACCCCCAACACTTCTGTATTTTGTGTTGATCGAAACGGTTGTTGCAACTTCACGACTGTTCAAGCGGCAGTCGACGCTGTGCCGATCTTGAGCTTCAAACGAAACATAATTTGGATCAACATTGGAATTTACTATGAGAAAGTGATAGTTCCAAAATCTAAAGCTAATGTGACATTTCAAGGACAAGGGTATACAACAACTGCCATTGTTTGGAATGACACTGCCAATTCTTCCCATGGCACCTTTTATAGTGGCTCTGTTCAAGTCTTCTCTTCCAATTTTATTGCCAAGAATATTAGCTTCATGAATGTGGCGCCAATTCCAGGCCCGGGCGACGTCGGAGCACAGGCGGTGGCGATTAGAATCGGAGGAGACCAGGCCGCGTTTTGGAGCTGCGGATTCTTCGGTGCTCAAGACACTCTCCACGACGACCGTGGCCGCCATTACTTCAAAGATTGCTACATCCAAGGCTCCATCGATTTCATCTTCGGCAATGGAAGATCCTTCTACGAGAGTTGCCAGTTGATTTCGATGGCGAATCCGGTTCCGCAAGGATCGAAGTTTGTGAACGGAGCGGTGACGGCGCACGGCAGAGCCTCCGCTGACGAGAACTCTGGATTTGTTTTTGTTAATTGCAGCATCGGCGGGACGGGCAGAGTGTGGCTCGGCCGCGCGTGGCGTCCGTTCTCTCGCGTCGTCTTTGCTAACACTGTCATGACGGATATTATTGCGCCGGAGGGTTGGAATGACTTTAATGACCCTGCAAGGGACCAGACAATCTTCTATGGAGAGTACAACTGCAATGGAGCAGGAGCCAATATGAGCTCAAGGGCTCCCTTTGTTCAGAGGCTTAATGATACTCAAGCTTCCCCTTTCCTCAACTTATCCTTCATTGATGCTGACCAATGGCTCCAACCTTATGCATTCTTTTAACTCAACATCCCTATTCTCCTTATTTAATTCACTCCTTTTTTTCAATACTATATATTCTTTTCATTCTCACCCCATCTAATTATTAAATCTCAATTCTATTTTAAAACTTTGCTCTCTACATTCATCTATATCTACTTCCTAAAACTTATGTTTTAATTAGTGTTTTGGTAAATTTTGGATTGTATTGTGATTCCATTTAGTTTGTATGTCATTTGTACGTTAGTGAAAAA 1507 44.33 MNNIMKYNHVLTNLALSSLLPLLAFLFMIKPTPPFLSNLVIFRDSIGCHHHHHHHHHHHHRRHHKNAADEEDQAAISSICDTFPITLLPPETPNTSVFCVDRNGCCNFTTVQAAVDAVPILSFKRNIIWINIGIYYEKVIVPKSKANVTFQGQGYTTTAIVWNDTANSSHGTFYSGSVQVFSSNFIAKNISFMNVAPIPGPGDVGAQAVAIRIGGDQAAFWSCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGRSFYESCQLISMANPVPQGSKFVNGAVTAHGRASADENSGFVFVNCSIGGTGRVWLGRAWRPFSRVVFANTVMTDIIAPEGWNDFNDPARDQTIFYGEYNCNGAGANMSSRAPFVQRLNDTQASPFLNLSFIDADQWLQPYAFF 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75600407 75605060 - XM_039047701.1 Bhi01g03027 25800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03027 401 Pfam Pectinesterase 100 391 IPR000070 GO:0030599|GO:0042545
Bhi01g03027 401 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 398 - -
Bhi01g03027 401 ProSitePatterns Pectinesterase signature 2. 246 255 IPR033131 -
Bhi01g03027 401 Gene3D - 94 400 IPR012334 -
Bhi01g03027 401 SUPERFAMILY Pectin lyase-like 97 398 IPR011050 -
Bhi01g03027 401 PANTHER PECTINESTERASE 8-RELATED 41 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03027 Bhi-Chr1:75600407 Bhi11g02033 Bhi-Chr11:57665942 6.50E-132 dispersed
Bhi12g00460 Bhi-Chr12:14785338 Bhi01g03027 Bhi-Chr1:75600407 1.00E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03027 - - bhj:120090174 793.497