Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03152 CAGCACTGTCCTCAACGCCTCATCGCATCTTCCGCTTTTCCTTCTTTCCCCCTTTTCTCACAGCCCTGTTTCTCTAACATCTCTCTCTTCCTCTCTCCTTTCCCATGCTTTCTCTCTCTAAAATCTCTCTCCCCTCTCTCTCTCCTCTTTCGCCATGTGAGCCTAAGCCCTAATTACCTTACCACCGCCATGTCTCTTCGCAGATCCTTTCTCTCTCGGAAGTTTTCTTCCAAGTCTTCCTCTAGAGATCCCAACGCTCTTGGCGGAATTCTTCCCTTGTCCGCCTCCGACTTCGATGATGCCTCCGCTCTGCCCGGAGGGAGTGGCGGCGATCGCTTTCAGGCTGAATCCGCTTGGTCTTCCATGCTACCGGAGCTTCTCCGGGAGATCATTCAGCGAGTCGAGGCTTCAGAAGATGGTTGGCCTAACCGCCAGAACGTTGTTTCCTGTGCTTGTGTCTGTAAGCGTTGGCGGGATATTACTAAAGAGGTCGCCAGGGCTACACCTCATACCGGGAAAATTACTTTCCCTTCTTGCCTCAAACAGCCTGGACCGAGTGATCTTCCACATCAGTGTCTTATAAAAAGGAACAAGAAGACTTCAACGTTTTTCCTTTATCTTGCCCTTACACCATCATTTACAGATAAGGGAAAATTTCTCTTAGCCGCGCGGAGATATAGGCATGGAGCTCATACTGAGTATATAATATCTCTTGATGCTGAAGACTTATCCCAAGGAAGCAATGCTTATGTGGGGAAGTTAAGCTCCGATTTTCTTGGCACCAATTTTACCATTTACGACAGCCAACCACCACATAATGGTGCAAAGCCATCAAGCAGTAAATCAAGCCGCCGGTTTGCAAGCAAGCAAATTAGCCCACAAGTGTCAGCAGGTAACTTTGAGGTTGGGCAAGTCTCTTACAAATTTAATCTTTTGAAATCAAGAGGCCCAAGGCGAATGATATGCTCTCTAAAGTGCCCAGTATCAGAAGACAATGGAAACAACAAATCTTGTGAGAACTCGAAGATGAAGAAATCCGATTCTCTTTCTTCCTCATCTGGGTTGACAATCTTAAGAAATAAGGCTCCTAGGTGGCACGAGCACCTGCAATGCTGGTGCTTGAATTTTCACGGTCGGGTTACAGTAGCATCTGTTAAAAACTTTCAACTTGTCGCTACTGTTGACCATAGCCAGCCTGGAGGTAAAGGGGACGAAGAAACAGTTCTACTACAGTTTGGAAAGGTAGGCGACGACACATTTACTATGGATTATAGGCAGCCATTATCAGCTTTCCAGGCTTTTGCCATTTGCCTTACGAGCTTTGGCACGAAGCTGGCGTGCGAATAGTAGTATATTCTACCAAAATTTGTTTCAGAAAATGGGGCTTCATTTATAAAAAGGCTTTTTTCTTTGTACATGGTGCTATTGTTGTGTAATTGTGACCACTTAAAAAAGAAAAATTGAAGTTGAGAGCAACAAAACAATATTGTGGTGCTAGCAAGCACTATGGCTTCTTTAAATCTTTATGTATATGTAATATATAATTAAAAGGGATGAGAATTGTTTATTCACCTCAATGTTTTTGATTTTGTTGCA 1596 44.3 MSLRRSFLSRKFSSKSSSRDPNALGGILPLSASDFDDASALPGGSGGDRFQAESAWSSMLPELLREIIQRVEASEDGWPNRQNVVSCACVCKRWRDITKEVARATPHTGKITFPSCLKQPGPSDLPHQCLIKRNKKTSTFFLYLALTPSFTDKGKFLLAARRYRHGAHTEYIISLDAEDLSQGSNAYVGKLSSDFLGTNFTIYDSQPPHNGAKPSSSKSSRRFASKQISPQVSAGNFEVGQVSYKFNLLKSRGPRRMICSLKCPVSEDNGNNKSCENSKMKKSDSLSSSSGLTILRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDHSQPGGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79309623 79314005 + XM_039042801.1 Bhi01g03152 25925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03152 385 MobiDBLite consensus disorder prediction 267 288 - -
Bhi01g03152 385 ProSitePatterns Tub family signature 2. 370 385 IPR018066 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 171 187 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 187 211 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 236 263 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 295 312 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 313 329 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 342 361 IPR000007 -
Bhi01g03152 385 PRINTS Tubby superfamily signature 363 385 IPR000007 -
Bhi01g03152 385 Pfam Tub family 117 380 IPR000007 -
Bhi01g03152 385 Gene3D - 51 102 - -
Bhi01g03152 385 PANTHER TUBBY-RELATED 47 385 - -
Bhi01g03152 385 Gene3D Tubby Protein; Chain A 112 385 IPR025659 -
Bhi01g03152 385 Pfam F-box domain 56 100 IPR001810 GO:0005515
Bhi01g03152 385 MobiDBLite consensus disorder prediction 205 225 - -
Bhi01g03152 385 PANTHER TUBBY-LIKE F-BOX PROTEIN 7 47 385 - -
Bhi01g03152 385 SUPERFAMILY Tubby C-terminal domain-like 107 385 IPR025659 -
Bhi01g03152 385 ProSitePatterns Tub family signature 1. 313 326 IPR018066 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03152 Bhi-Chr1:79309623 Bhi12g01742 Bhi-Chr12:56464738 3.03E-134 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
297 PF01167 Tub 9.50E-103 CL0395 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03152 K19600 - csv:101211968 681.404