Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03185 CTCTGTTCTTCAAGTTCCAACCCTTCCATTTTTCACGGAAATGTTTCTTCTCTAATTTCCCGGGCTTTGTCAAAGAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAACACTTTCCTCCGCCGTTCACGGTGGTCCATCTAAGATCCGATCGCCGTCGCCGATCAGCGCCTCCGGCGAGCATCCGATTCAGATATCTCTCGCTCTCAGTTCTTCTACTTCGCTGTTTCTTGTCTGATTTATCCAGTGGTCTTTTTCTTTTGTTTCACTTCGTTTCATTGATTGTTACAGAGCCTCGAGGAATTTTCCGTTTTCTTAGACTTTGTCTTTTGTGTCCGATTTGTCTACTTCGAAGTTGCGAAGGACGTTTTTACACTGTCAGTTTCTTTCGTGTTTCGATCCTTGGACTCGACTGATTTCTGTTGGAAGATTTATCTCTGTTTCCTGTAAAATTTTGTTTGTGATTGTAGTTGAATCGTATTCTTCCTGAGATAGACGGAGGCAATTCGAAAGAATTGCTTTCTGATCTATCTGTTGAAGCTGTGGGAACTTTGATTTGTTGGTTCAGAGTGTGTTTGTGTGTGTGGGTGTGTGTTGGAGATGACGTCGGGGACGAGGCTACCAACATGGAGGGAGCGTGAGAACAATAAGAGAAGGGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCTGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACTGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCGGCAGCTGCAAGCCCATATGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGGTAATCCGAATGCTGATGGAAGTTCACTTATCCCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCGTCCAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCTGTTACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCACGACTCAAACCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCACAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCACTCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAACTCTCCAACATTTAGTCTTGTTTCGACAAACCCATTTGGTTTCAAGGAATCAGCAATGACTGGTGGAGGATCTCGCATGTGGAACCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTGATCTCTGATGAGTTCGCCTTTGGAAGCAATGCAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAGGAATGTGGTTCAGATGATCTAGAGCTGACTCTTGGGAACTCAAGGACCAGGTAATGTAATGGATAGCACACATATTACCAAATAGTCTACTTGCAAATCCCTGGTGAGAACTGTCACATTGGGTTCAAGGTGAGCGTTACTGATTCTGCTTCCTTCCACCACCCATTATTATTCTTTTTTAAAATTTTCATTTTCCCTCGTTAAGTTAAATATACAGGTCCCTGTCCCTTTGGAAACAGAATTTTTACTGTTAGTGTCGTATATGTATGTGTTGTTTGTCTTCAATCTTTCGTTTTCCTTTATAGATCACAAAAAAAATGCTGAATGAACTGATGAGATAATCCATATGCAACAGTGCCCTAACTTTTGTGGATATCGAGAGAGTGGAACTTTTCCGTTGGCTTTTCTTTCTTCAATGATAGTCATTGTTGTTATCATTA 1960 44.08 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKPDWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPTPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKESAMTGGGSRMWNPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTR 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80103735 80107502 + XM_039036601.1 Bhi01g03185 25958

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03185 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Bhi01g03185 325 MobiDBLite consensus disorder prediction 1 20 - -
Bhi01g03185 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 325 - -
Bhi01g03185 325 MobiDBLite consensus disorder prediction 158 184 - -
Bhi01g03185 325 MobiDBLite consensus disorder prediction 88 122 - -
Bhi01g03185 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Bhi01g03185 325 MobiDBLite consensus disorder prediction 91 122 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03185 - - - csv:101210002 593.578
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03185 Bhi-Chr1:80103735 Bhi08g02144 Bhi-Chr8:61597389 1.89E-135 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi04g00271 . 1 310 BZR Transcription Factor Family AT1G75080 59.4 2.9e-87 319.7
Bhi03g01260 . 28 319 BZR Transcription Factor Family AT1G75080 59.2 9.0e-81 298.1
Bhi04g00271 . 1 311 BZR Transcription Factor Family AT1G19350 59.7 2.2e-87 320.1
Bhi03g01260 . 28 317 BZR Transcription Factor Family AT1G19350 59.5 3.2e-78 289.7
Bhi03g01260 . 6 319 BZR Transcription Factor Family AT3G50750 57.1 3.8e-77 285.8
Bhi04g00271 . 1 310 BZR Transcription Factor Family AT3G50750 51.1 1.0e-61 234.6
Bhi08g02144 . 80 327 BZR Transcription Factor Family AT4G18890 53.4 6.0e-51 198.4
Bhi08g02146 . 80 327 BZR Transcription Factor Family AT4G18890 53.4 6.0e-51 198.4
Bhi08g02145 . 60 307 BZR Transcription Factor Family AT4G18890 53.4 6.0e-51 198.4
Bhi01g03185 . 77 325 BZR Transcription Factor Family AT4G18890 53.4 2.1e-48 189.9
Bhi01g03185 . 1 325 BZR Transcription Factor Family AT1G78700 72.8 2.9e-116 416.0
Bhi08g02144 . 1 327 BZR Transcription Factor Family AT1G78700 68.0 1.2e-103 374.0
Bhi08g02146 . 1 327 BZR Transcription Factor Family AT1G78700 68.0 1.2e-103 374.0
Bhi08g02145 . 50 307 BZR Transcription Factor Family AT1G78700 61.0 1.4e-62 237.7
Bhi03g01260 . 28 200 BZR Transcription Factor Family AT4G36780 79.1 6.0e-64 241.9
Bhi04g00271 . 33 204 BZR Transcription Factor Family AT4G36780 59.9 3.2e-41 166.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000940 3 4 6 4 3 2 4 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 6 3 3 85
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
298 PF05687 BES1_N 1.30E-65 No_clan Bhi TF