Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03200 ATTGATACCAAAATATCAGTCTGAATTCACACTCCGAATCACAAATCAAATCCCATTCTTAAACCTCTCCTCAACTTCATCCACTTGCTCCCCAAGGAACCTTATTCCTTTTCGTTTCCATCTTTGCTCGAACAATTTTTTTCTTTCTAATTCCAATTTCCAAAGGGGTTTTTTCTCACCTTCAACTAGCGCTGTGATTCTTGTGAAAATCAGGTAACAGGGGGAAGTTTTCTTTTTCTTTTCTGGGTTTTTCCCACAGAGTTTCAATGATGATGAATGGGATTTAGAGGATTCGAGAGAAGGTGAGAGATTTGAGGATGAAGATTCAGTGCAATGTCTGTGAGATGGCTGAGGCGACCGTTCTGTGTTGTGCTGATGAGGCGGCGCTGTGCTGGGCCTGTGATGAGAAGATTCATGCGGCCAACAAGCTTGCAAGCAAGCATCAGAGAGTTCCCCTCTCTGGTTCTTCATCTCAGATGCCCAAATGCGACATCTGCCAGGAAGCTAGTGGCTATATCTTCTGTTTAGAGGATCGAGCATTACTTTGCAGAAAGTGTGATGTTGCTATACACACAGCAAATACTTTTGTAACTGGACATCAGCGCTTTCTGCTTACTGGTGTGAAAGTGGCGCTCGAGCCAACTGACCCTGTTGCTTGTTCTTCCATGGCTAAGTCACATTCTCGAGAGAAGTCTACTGAGATTAAAGTTAGACCACTGTCTGAAAGGGAATTCTCGATGCCTTCTCCTGGTGAACTCAGCAGAAGCTTGTCTGTACTAGGTGGATCTGAGGACTTTATGGAAAATAGAACGTTGCTTACTGGAGGCGGAGATTCTGTTTCTGGTGGCTTTTCACAGTGGCAAATGGATGAACTTATTAATCTGACTGGATTTAATCAAAACTATGGATATATGGATAACGGATCATCCAAGGCTGATAGTGGTAAGCTTGGGGATTCTGATTCATCACCAGTTTTAAGAGCTGCTGACATCGAACTGGACAATGACGATGAATGCTCGGTTCAGGTTCCAGAGGCTTCCTGGACTGTGCCTCAGATTCCCTCTCCACCCACAGCATCAGGCTTATACTGGCCAAGGAGTTACCATAATTCTATGGATGGTGCTGTTTTTGTTCCTGACATCTCCTGTTCTTCAGAAAAGGTTCAACATTGCTCACATAATGGTACATTCTCGAAACGAAGAAGACAGTTCTAGATGTGTGAGCTGTAGCATTGGGACTACATTGCCAGCGTTCTGAACGAACCCCAGCCCGGTTTGTTGTGTGTTTATAGGCTTTCATTACAATTGAGTTATAATAAGTGGACACGACCAAAGATTATCGCTTGAAATGTATACCTTGTAACGTAACCACTATAGTTTAGGATTTGTTACATTGATGTAGAAATAAAACCTGTGCATTAGTTGACCTTCTAGGTATTTTTTTCAGATTTATTTCAAACATCATATGGAAATGATTATGTTTCAAATCACGTTGACCTACTTGATTATTTGTAGTTTTACACAAATTATGAAGAATCAATGTTATGTCTTGGCCATTTCTAGTCCTGTACCTCTTCTTCATTGTGCATATGTAATTGACTTCTTTCCTGGTTCTGTAA 1618 41.66 MKIQCNVCEMAEATVLCCADEAALCWACDEKIHAANKLASKHQRVPLSGSSSQMPKCDICQEASGYIFCLEDRALLCRKCDVAIHTANTFVTGHQRFLLTGVKVALEPTDPVACSSMAKSHSREKSTEIKVRPLSEREFSMPSPGELSRSLSVLGGSEDFMENRTLLTGGGDSVSGGFSQWQMDELINLTGFNQNYGYMDNGSSKADSGKLGDSDSSPVLRAADIELDNDDECSVQVPEASWTVPQIPSPPTASGLYWPRSYHNSMDGAVFVPDISCSSEKVQHCSHNGTFSKRRRQF 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80175021 80178336 + XM_039049016.1 Bhi01g03200 25973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03200 298 Gene3D Classic Zinc Finger 1 92 - -
Bhi01g03200 298 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bhi01g03200 298 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bhi01g03200 298 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 297 - -
Bhi01g03200 298 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Bhi01g03200 298 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Bhi01g03200 298 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 297 - -
Bhi01g03200 298 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bhi01g03200 298 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bhi01g03200 298 CDD Bbox1_BBX-like 5 47 - -
Bhi01g03200 298 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03200 Bhi-Chr1:80175021 Bhi12g02501 Bhi-Chr12:78596226 7.31E-44 dispersed
Bhi03g00888 Bhi-Chr3:16612982 Bhi01g03200 Bhi-Chr1:80175021 6.90E-25 dispersed
Bhi01g03200 Bhi-Chr1:80175021 Bhi04g00223 Bhi-Chr4:5456637 2.99E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
299 PF00643 zf-B_box 3.30E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03200 - - bhj:120091143 616.305