Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03276 ATGCAAACAGCAAATTTCAGCTCCAATGGCGACCGGTTTTCTGCTTTCACACTTCTTCCTCACTCCGCCATCAGAGAGGTGACCCTTCATCTTCCAGAGATGAAACAGCGGCTTCGTTTTGGTTGCGCTATGAGTCCAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTCAAACATTTTACGAGCAACGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTTCCCTAATGAAAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGCACATTTACGGCCAGAAAGGATGTAAATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAACAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTGCGGTGGGTCAGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATTTGAGCCCGGCTTCATACAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGAGAGATGGATTGCTGCTAGACCGTGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAACAAGCAAACTCAATAAAGTGACATATCAACCGGGGTCGAAGGTCTCAAACTTAGCCAGACATTCTTTGTCGAACAGTGAGGGGCGTTCAAAGGCCAGAAATTCTGCTATACCCAACTGCTGAAACAAGCTACAAGAAGCTGAAGGTCATTTTGTATTTAATCACACAACCCACAAACCACAGCTGACTAATTCAATGATATGAATTTGGTAGTTCTCACTATAATTTCACGCGGCTTGCTTTGTAGTATGAATCTCTACTATTATGCCTAATAAGAGTTTCATATCTTCCATGAAAAAACATGCTTTGTATTCCATCATTTTCTTCCTCCTAGACATTTCCTTGATTAGTCTGCTATTCTCAAGAAAGAAGAATACAAGGTGTCTGAACCTAAGAGGTCTCATTTACACTTCCCCTGCTCTGGGTTTATTGCTCTGCATATACTGAATTAAAGAAGCACCAACTAAAGCTGAGCATTGTCACTATCTCCACATGAGACAATTTTTTTATCTAAGAGTCTGCATATAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGGAACATTCCAGCTAGATTCTGAAATTTAACAGGGTTGGGGACCATAGGCAGATGGTGAAGGAAAATAATTTGGTGGTATCCATCTGTATATTCTTCTATAATTGGGGTTTTTTTGTGTTCATACCCTTCTTTCTTAGTTGTCCGGTAGATTTACTCCACTCTACCCCACTTGGTCTAACAGCCACGCTATCTATCACGTTCATATTGAATATGGTGCAATATTTCAAATTCCTCTACCACAGGATCTTATTGAGTTCTAATCAGTTTCCTTTTCTCTATCAAAACCTAAAAAACATTGTTTCAGAAGGAAATACTATCCCTTATACCAATACTGAGAAACAGGAATCCAATTCTAGTAACTTGAGCAAAGCCGGATCCCTAAGATTGGTATAAGCTCCAACTTGAGGTTCAGATAAGAACGGAATCTTAGTTTCAATGGGCTTATCAGAATCAGCTTTCTTGTGCTTTCCTGGTCACACTAGAATTCAGATTCTAAGATTATCATTCAAGGAAGCTTAAAGGAATGTTTGCCAAAAATAATTTGCCAATTTTGTGATCAAAATTTCTGAATTTGACGCTCAGTATTAGGAGGCAAAACATTGGACTTGCTGAATTTTTTAGTTCTACAACTGTCTAGCAATTATCTACTGTTCTAGGAAAGTGACTTGTCATTTGCCAATTTGCCCCAAAATCCAATCAATGAAAAAGAAGTGAAAGATTTATTCTCATAATTCCTTCTGCAGGTTTTAAGGAAGTTGCTGAGGCAAAACAAGTTTCTCTTAGATTCACTAAAGCAAACATCATAGTTGCAGGAAATAGCAATTAGCTTATGCAATCTAGACAACAGCTTAGCTCCTTTAACCAGGTAAAAGGATACCAACTATTTTCCTATTGTTTTTGGAACAAGAAAGCATCCACCATCTTTAACCAAAGCTGATAAGCATAATAAGGTCAAGATATGCCTAAACCTTTAAAATCTAGTCTTTTCCCATAGAACTTTGCTGTTAATGTTATGCATAGAATTCAGGGGACGGACCATACCAGAAACAGGCTCAGTTTCCTGCATAAGGGGAAAGTAGAACATGCCAAAGAAACTAAAATTGAAATATCGATTTAAAAAAAGTAATCAGAATAATCATAGTCTTGCTACAGAAACAAATAAGAAAGACAATTCCATCGAAGAGATTCATCAAAGATTAGACCTGAGAGGTTTTTTTTTAACATAAACAACTGACAGAAGCTTAAATAAACCATGGACCATAAGACCTGAAAAGGTACTCAGATTCACTACTTCCATGGTAAAGGCCATTGAAACAAAACGACCCAAAATTCTGCCTCTTGAAATCCATGCGGTGGCTTGACGCTGGTGCTGCTAACCTTGGCTTTTCTAATTGAAGATGCACACCTGCAATAACAAAACGGTCTAAA 2777 39.21 MQTANFSSNGDRFSAFTLLPHSAIREVTLHLPEMKQRLRFGCAMSPANCFWTIFKQRKVKHFTSNGEQVHVKTGKSNGFPNEKSEDLAATRIQNAFRTFTARKDVNNSKVPERCQDLIQGETATKQVLSFIHSWNRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWCGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVTYQPGSKVSNLARHSLSNSEGRSKARNSAIPNC 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 82049547 82063852 + XM_039033874.1 Bhi01g03276 26049

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03276 304 MobiDBLite consensus disorder prediction 254 304 - -
Bhi01g03276 304 ProSiteProfiles IQ motif profile. 85 113 IPR000048 GO:0005515
Bhi01g03276 304 PANTHER IQ-DOMAIN 5-RELATED 66 296 - -
Bhi01g03276 304 Coils Coil 155 175 - -
Bhi01g03276 304 MobiDBLite consensus disorder prediction 255 304 - -
Bhi01g03276 304 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 66 296 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03276 - - - csv:101206595 465.692
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03276 Bhi-Chr1:82049547 Bhi03g00326 Bhi-Chr3:6963887 5.56E-70 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00669 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi06g00668 . 1 479 IQD Protein Family AT3G52290 54.2 5.3e-102 369.0
Bhi02g01384 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01383 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi02g01385 . 1 408 IQD Protein Family AT3G22190 57.5 1.5e-96 350.9
Bhi09g03139 . 1 438 IQD Protein Family AT2G26180 61.6 9.3e-120 427.9
Bhi03g00330 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00327 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00326 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00329 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00328 . 1 274 IQD Protein Family AT2G33990 53.6 1.2e-61 234.2
Bhi03g00324 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00323 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi03g00325 . 4 223 IQD Protein Family AT2G33990 57.6 5.8e-59 225.3
Bhi01g03276 . 83 266 IQD Protein Family AT2G33990 53.5 1.6e-48 190.7
Bhi01g03276 . 86 259 IQD Protein Family AT3G15050 62.7 8.5e-55 211.5
Bhi03g00330 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00327 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00326 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00329 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00328 . 56 232 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00324 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00323 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi03g00325 . 5 181 IQD Protein Family AT3G15050 58.2 9.4e-54 208.0
Bhi12g01121 . 124 476 IQD Protein Family AT5G13460 52.1 9.4e-78 288.5
Bhi12g02233 . 1 508 IQD Protein Family AT4G00820 51.3 2.8e-113 406.8
Bhi12g02232 . 1 509 IQD Protein Family AT4G00820 51.2 3.7e-113 406.4
Bhi01g00618 . 1 466 IQD Protein Family AT4G00820 50.5 1.1e-104 378.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011558 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 30