Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03318 TCACAAACAAACAGCTTTATTAAACAAAAAAAAGGGTCAACGGTTAACGAACAAACTGAAAATTAGAGGCCAATTAAAGCATTAAATCCTTCTGTTTTTGCCAGCCCCACATTTTGTTCTCCTCCATTAATCTTCACCAAAACACACAAACTGATTCCCTTAGACAGAAACACACAGAAACAGAAACAGAGACGAACCCGGACTCACTCTTCTTTTCTCATTTCCCCTTTTTTTCTTCCCTCACCAAATTAATTTCTCTCCTTTCCTTTCTTTTATCTCTCCATTTTCTCCATTTCTCACTACCCATTGTTTTATTCATGGAGAAAAACCCACCCCCAGAAAAGTCTGAAAGTTTTTCTAAAAATTTTAATAGAAAGATTGCTAATTTAGGCTCACCTCGACGGACTCTCGACGCTGCTGCTTCCGATGCTAAATCCGATTCCGAAAAGCTTCCTGCCGACGGAGATGACGATGCTTATATTGAAGACCCTCTTTCTGAATCCGATACAGCCTTGATTTTCGAAGAGGTTGATCGATTTCTTCAGACTTTGTCCAATGTTGGAGATGATGGATCCAATCTAATCCATGAAATTCCGAGCTCCGTTCATTCGTTGTCGAAAATGGTGGACTCGATGATCACCAGGTACAATTCTAACAAATATCCGGCGAAGCTTGGGAAAGATCCTGACCGGGATTCTTCCTTTTTCGAAGCTTTAGGTCGCATTTCCAAGATTGCGATTAAATTAAGTGAATTCCCTACCAGTACTGCCTCGATTCCTTCTTTCAATCGGACTACCACGGCTCTACAGCGAGCGATGTCATTATTGGATGAAGAATTCAATGCCCTTTTGAAAGAATGCAAACATCGGGAGCTTGATTCGAAATCTGACAGGAAAGCATCAAAGCAATCGTCGTTCAAAACAATCAATGAAGCAACAGATCAACAAAACAGCACTGTTCCTGAATCATCCGAGTCCGATTCTGCTAAGGAAGAGATATTCCCGTCTTTTGCGCCGGAAACTGTGTCAAACATGAAAAGAATTGCCGGAACAATGATCTCCGCTGGTTATGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGTTCGTTCAAAGGAATATTGAACAAGCTGGGGTATGAAAGTATTAGCATAGACGAGATTCAGAAAATGCAATGGGAAACTCTTCAATCGGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAGTCTCTGTTCCCAGGCGAGTGGAAGCTTTGTGACTCTGTTTTCAACGATCATCCCTTCATTTCCCATACGCTCTTCAGCAATTTAACAAGAGCGGTAGTCATCAAGCTTCTCAACTTCGCAAACGCCGTTGTTTTAACAAAACGATCGGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACCATCCGCGATTTAATCCCAGCCATTAATGGCTTCCCTGAAAATTGTAGAACAGAGCTAATTTCCGAAGCCGAAGGGGCAAAAAACGGGATAGGCGAAGCAATAGTCGGCATTTTCTACGACCTAGAGAACTCAATCAAAAGCGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACACGCTACATAATGAATTACCTAAAATACGCATGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAATTTCTCGACCCTAAAGCCGATGAAAACCGACCGGCAAGAATGGACGAGAACGACGACGCGTCGCCGAGAAAATCTCAGCTCGCAATTCAGATCGCAATGGTAATGGATCTGCTCGACGCGAATCTCGCAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATAGTACAAAAGATCAAAGGCTCAAGTGGAATTACCGAGTTGATGGGCGACCGTTGGTGCCGGAAACGATCGACGAATCTGCGACAATACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTATTGCAATGCCTAAGCCACGAAGGATTGCTGGTGAACGGGAAGGTGTCGAAGCCGATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAAAGCAGTTGGGTAGTGAGCGACGAGCAACTTCAATCGGAGCTTAGGATATCGGTGTCGGCGGTGATGATTCCGGCGTACCGCTCGTTCGTTGGGAGATTCAAGCAGCATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCTGAAGACATTGAAGGTTTGATTGATGACCTGTTTGATGGAAATACTGCGTCTATGGGGAGAAGAAGATAGTAGAAACACTAAATTTCACTCGGATACAGTCTCTTAATTTTTTCTTTTTTCTTTTTTCTTTTTTTCCTTTCCATTTAATTGAATTTCTGTACTGATAATTTTTTTTCTTATTGTGATTTATTTTTTTCCTCCCAATAACACGTGGGAA 2487 42.58 MEKNPPPEKSESFSKNFNRKIANLGSPRRTLDAAASDAKSDSEKLPADGDDDAYIEDPLSESDTALIFEEVDRFLQTLSNVGDDGSNLIHEIPSSVHSLSKMVDSMITRYNSNKYPAKLGKDPDRDSSFFEALGRISKIAIKLSEFPTSTASIPSFNRTTTALQRAMSLLDEEFNALLKECKHRELDSKSDRKASKQSSFKTINEATDQQNSTVPESSESDSAKEEIFPSFAPETVSNMKRIAGTMISAGYEKECCMSYSFLRQSSFKGILNKLGYESISIDEIQKMQWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSVFNDHPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPAINGFPENCRTELISEAEGAKNGIGEAIVGIFYDLENSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKADENRPARMDENDDASPRKSQLAIQIAMVMDLLDANLAMRSKLYRDASLRYIFLMNNGRYIVQKIKGSSGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRR 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83466045 83468531 + XM_039032292.1 Bhi01g03318 26091

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03318 673 MobiDBLite consensus disorder prediction 1 56 - -
Bhi01g03318 673 MobiDBLite consensus disorder prediction 1 15 - -
Bhi01g03318 673 MobiDBLite consensus disorder prediction 187 225 - -
Bhi01g03318 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 56 672 IPR004140 GO:0000145|GO:0006887
Bhi01g03318 673 MobiDBLite consensus disorder prediction 34 51 - -
Bhi01g03318 673 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 56 672 - -
Bhi01g03318 673 Pfam Exo70 exocyst complex subunit 298 660 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi01g03318 673 MobiDBLite consensus disorder prediction 199 218 - -
Bhi01g03318 673 SUPERFAMILY Cullin repeat-like 119 663 IPR016159 -
Bhi01g03318 673 Gene3D Exocyst complex component Exo70 112 672 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03318 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101220402 1231.08
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03318 Bhi-Chr1:83466045 Bhi12g01225 Bhi-Chr12:36323426 0 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005149 2 1 3 3 3 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 41