Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03378 TTGTCAAAAATCTCCATGTGTATGGATGTGGAAAACCCCTCTCATCACTGTCTTTCTTGCCCTTACTCCCTACAGTGGAAGAGGGTTTACCAGAGAGACTCACTATTATGATCACTCATCACTTTTACCCAAAAACAAATGGCTCTGTTTATAGTTTTTTCACTTCTTCCTTCTTCTGTCCTTCAATCCACCTTGGCCCTCCTCTGTTTACAGCTCATTTTCTTCTTCTTCCTTCCCCCATTATTCTTTTCCCAATTTTAATAGCACACTCTTTCTTCCTTCAACTCTCCTCATTTTCCTTAGTTTTGAGCTCCAAATCTTCACTTTATTCATTCATTCATCTTCTGGGTCTTTCTCTTTTTTCATATACTACTTCCCCATCTCTCTAGTTTTTAGTCTGCTTGTATACAGATTATGATCTTCTTGCTTGCTTTTTATTGGGTTTCATTTTATGACTTACCCACATAGAGTTCTACTTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTGATTTGTGTATGTTGAATTTTGATCGAGCTTTGTCTGCCACTAGTTTCTGTTATTGACTGTTGGAATTCACTATCTTTTTCCGCTAAGTTTGGAGCTACAATTCAATGAATCCTGTACGAATTTGTAGTTTGTTCTTCCTTCTATACTTCGTTGTTCTTCTTCAAGATCATTCTCTCTGTTCTTCTTATTCCACGCCCTTGAATTGTACGGACACAACCCGTTTATGCACCTCGTTTCTGGCCTTTAAGCCTCAGCCAAATCAGACTCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTAACCGTCGAAGGGAATGGTCAGGACTATGTGTTCATCAGGAAGAACTGCTCCTGTGCTTCTGGGCTGAAGAAATATATAACCAACACCACTTTTACCATCAAATCCAATCGCGGCCGTGTATATGATATAGTCATGGAAGCGTATGATGGGCTTGCGCTGCTGCCCAACACAACCCGAATGGCGAGGAACGGCGCTGTTGTGTCTTTGAGACTGTTCTGTGCCTGTTCAAGTGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGTGACACCATAGAGTCTTTGGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGACAATCCTAGCAATGTTACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTGCCTGGCGATCCTTATCCGTTGAAGACAGACATTTCTCCTGCTCCTACTCCAGCTCCTTCTTATACTCTGAACAATTTCTCAGATAATAATGCTCAGAACCCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTTATTTTGGTCGGCATAGTAGGTTATGCTTGCTTCAGGTGGCTGAAATGCTTTTCTAGATCAAGGACTAGCCGGTCCAAAGATCCCGGTGGCAAGGTTTCCCACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGCTGTGCTTCAGGAAGATATATTTGCTGCAGTTCAGCAGATTGGAAGCAAGCCAACGGGGAATCTACCGACAACCAGAGAGCAATTCCAAAAGCTATCGAGAGTAATGTATTTGATGTAGACAAACCTGTGGTTTTTTCATGCGAAGAAATTTTTTCCTCGACTGATAGTTTCTCTGATTCAAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTACTATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCTACAAAAACTAAAGAGTTTATGGCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCTAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTGTTTCTTATTTATGAATATGCTCAAAAAGGTCCACTTAAAAGCCATTTACATGATCCTCTGAACAAGGGTCATACACCACTATCTTGGATTATGAGACTCCAAATTGCTTTGGATGCTGCGAGAGGTCTCGAATACATTCATGAGCATACTAAAACTCATTATGTCCATAGAGATATCAAGACGAGCAACATCTTACTTGATGGTTCTTTTAGAGCAAAGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGCAAAACAAATGAGGGTGAAGCTACAGTTACCAAAGTTGTTGGTACATACGGTTATTTGGCTCCTGAATATTTGAGTAACGGTCTTGCGACAACCAAAAGTGATGTGTATGCTTATGGTGTCGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACAACTATGAAAAATCCTGAAAGACGTTCACTAGCATCCATTATGTTAGCCGTTCTTCGGAATGCACCTGATTCTATGAATATGGCAAGTCTGAAAGATCAAGTTGATCCGAGTATGATGGATTTGTATCCTCATGACTGTCTATTTAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATTCAATCTTACGACCTGACATGAAGCAAGTCGTAATATCCTTATCACAGATCCTACTCTCTTCGATCGAGTGGGAAGCGACTCTAGCCGGTAACAGTCAAGTTTTTAGTGGTCTTGTCCAAGGAAGATAGTTGTGAAACTACATGGGCTCAACCATCATTCTGCCATATGCCATCTACTATTTTGTCCATTGAACCTCTCCTGATTCGTCTTCTCTAATTGTCTAGCAGCAGCAGCAGTAGCAGCCGCCACCCCTCGAATGCATTCAGTAAAGTCAATGTCTTTAAGCGGTAATTGTTCCATATTGTTGCACTGTCAATTTTTGCCTACGATCTTCGCATCCTCCGTTGCCTATTTCTCGGGATAGGGCTAAGTTGGAGCTTGTTTGAGCTTTCCTAGTACAAGTAAAGAACACTTATGTTGAATAATCTCCCTCTGGCTTTCTGAAGAGCCACAAATGCATCCAATGCACATAATTGCATTTATTATCATTGAGATGATTTATTTGAATGTTTGTCATAACTCATCAGGAGTCAATGCAATGCAGAAAGGCTGCTATATAATGTGAAGTGTGGTAGAGAAAATATTCAATGTACTTTACTTCTCTTATTTTGGATGTGCACTAAATAAAAAAGAAAAGCCAGGTTGGAAGG 3140 40.67 MNPVRICSLFFLLYFVVLLQDHSLCSSYSTPLNCTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGQDYVFIRKNCSCASGLKKYITNTTFTIKSNRGRVYDIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIDNPSNVTVGALYYIPLNSVPGDPYPLKTDISPAPTPAPSYTLNNFSDNNAQNPKRHPPYIWIVGSLGIILVLILVGIVGYACFRWLKCFSRSRTSRSKDPGGKVSHKFHILGKSSFCCASGRYICCSSADWKQANGESTDNQRAIPKAIESNVFDVDKPVVFSCEEIFSSTDSFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKSHLHDPLNKGHTPLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAYGVVLFELISGKEAIIRTEGTTMKNPERRSLASIMLAVLRNAPDSMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDSILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85117379 85123042 + XM_039043285.1 Bhi01g03378 26151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03378 667 SMART serkin_6 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g03378 667 Gene3D Phosphorylase Kinase; domain 1 329 428 - -
Bhi01g03378 667 Pfam LysM domain 155 192 IPR018392 -
Bhi01g03378 667 PANTHER BNAA06G02020D PROTEIN 32 667 - -
Bhi01g03378 667 SMART LysM_2 154 198 IPR018392 -
Bhi01g03378 667 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Bhi01g03378 667 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Bhi01g03378 667 Gene3D LysM domain 150 203 IPR036779 -
Bhi01g03378 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 667 IPR044812 GO:0019199|GO:0045087
Bhi01g03378 667 SUPERFAMILY Protein kinase-like (PK-like) 339 639 IPR011009 -
Bhi01g03378 667 Pfam Protein tyrosine and serine/threonine kinase 361 637 IPR001245 GO:0004672|GO:0006468
Bhi01g03378 667 ProSiteProfiles Protein kinase domain profile. 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g03378 667 CDD LysM 154 197 IPR018392 -
Bhi01g03378 667 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Bhi01g03378 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Bhi01g03378 667 SUPERFAMILY LysM domain 153 198 IPR036779 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03378 Bhi-Chr1:85117379 Bhi07g01768 Bhi-Chr7:48415850 1.42E-115 dispersed
Bhi01g03378 Bhi-Chr1:85117379 Bhi06g02026 Bhi-Chr6:55607244 2.81E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87421 PF07714 PK_Tyr_Ser-Thr 1.00E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03378 - - csv:101213624 1234.17