Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03387 AGGAATTAATGTCAAATTATAGAAGGTTTGGTTGGTTATAAGTCGCTTTGTTAGGAGCCTACAAAATTTTATTTACATGTAAAATTTTATTTATATATATAATATAATGTACCATACGAAACTCTCACATGTTACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGGAGAATCGATAATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAATACAGAAATCAAAAGGGGAAAACAGGGGGATCAAGAACAGAGGGATCAGAAACACCCAATTTACAGAGGCGTACGGAAAAGGAGTTGGGGCAAATGGGTATCGGAGATCCGGCAGCCGAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCAGCTCTCAGCATTAAAGGTGATTCGGCAAAAGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCCCGGCCGGTATCGTTAATGCCGAGGGATATTCAAAAGGCGGCTGCCAAGGCGGCGGCGATGGTCGATTTCGATTCCGCTACGGTATCGCTTTCGTCGTCGAATGATGACGAAGGGTCAGATGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGGGGACATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCGGGGGAAATGGATTTCTGTGCGGTGTTTTCAGATCAAAGTACGCCTCCGGTCACCTTCGACGGCGGCGATTGGGAGTGGGGAAAAAAATTGTAAAATTAAAAAAGAAAGTTCTTTGTCGAAATTTTAGTCGATTCTCAATTCCATTTCATGTGAGATTGTGGCGATTTTGAAAAAGAAAAATTGTAATAGTTGAAAAGTAGAATTCGGAAA 943 43.8 MYHTKLSHVTLLLLLLLLLLLLLLLLLGESIMAEPNNWNSESENTEIKRGKQGDQEQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQKAAAKAAAMVDFDSATVSLSSSNDDEGSDELGEIVELPNIEGDIRAESWNEFEFIDSVDWWGNPPFAAGEMDFCAVFSDQSTPPVTFDGGDWEWGKKL 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 85414006 85414948 + XM_039050676.1 Bhi01g03387 26160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03387 239 Gene3D AP2/ERF domain 64 124 IPR036955 GO:0003700|GO:0006355
Bhi01g03387 239 SUPERFAMILY DNA-binding domain 64 124 IPR016177 GO:0003677
Bhi01g03387 239 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Bhi01g03387 239 CDD AP2 63 123 IPR001471 GO:0003700|GO:0006355
Bhi01g03387 239 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Bhi01g03387 239 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Bhi01g03387 239 ProSiteProfiles AP2/ERF domain profile. 64 123 IPR001471 GO:0003700|GO:0006355
Bhi01g03387 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TINY-LIKE 43 221 - -
Bhi01g03387 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 43 221 - -
Bhi01g03387 239 MobiDBLite consensus disorder prediction 38 62 - -
Bhi01g03387 239 MobiDBLite consensus disorder prediction 44 62 - -
Bhi01g03387 239 SMART rav1_2 64 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03387 Bhi-Chr1:85414006 Bhi09g02579 Bhi-Chr9:70068021 1.42E-47 dispersed
Bhi01g03387 Bhi-Chr1:85414006 Bhi09g00183 Bhi-Chr9:4102928 7.61E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
311 PF00847 AP2 3.50E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03387 K09286 - csv:101222354 367.851