Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03413 CCCAATGAGCTCAGCCATTTTGTTGTCATCTCCTTTAAAATCTCTCCACTCCCTCTTCTTCACTTGTCTTCATCTCAATTTCTTCTCAATCCCCTTTTAATTTCACCATCCATCGCCCTTCTTTCTATGGGTGCCGACATGTCGAACAACAACAATAATACTAATCGCCTTGCTTTCACCAAAGATTTCTTCTCCTCTCCGGCTCTTTCTCTTACCCTTGCGGGGATTTTCCGTCGGGGAGAGGTGACGGAGAAGGGGGATGTTGAGATGGAGGAGGTGGACGATGGAGCACGGAGAGATGATACGACAGCGGAACTTAGTAGCGAGAATTCGGGACCGATGAGGTCGAGATCGGACGACGAGGGTCTTGACGGCGGGGGAGGGGAGAATGAAGATGGGGTGGATCATGGGTGTCATGTAAAGAGAAGGAAGAAATATCATCGGCATACAACGGAGCAGATCAGAGAAATGGAGGCGCTGTTTAAAGAATCACCACATCCAGATGAGAAGCAAAGGCAGCAGCTAAGCAAGCGATTAGGACTTTCACCAAGGCAGGTCAAATTTTGGTTCCAAAATCGTCGAACCCAAATCAAAGCTATTCAAGAGAGGCATGAAAACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTTCTAAGAAGAAAGTTGGCTGTGCAAACTGTGGAATTTCCGACGCTGGGGAAGACCATGTCGCTTTGACAACCACGGAGCAATTGCGTATTAAGAATGCCAAGCTCAAAGCCGAGGTTGAGAAACTACGAGCTGCACTAGGAAAATACCCACAAGCAGCAGCGTCTCCATCGTACTCATCAGGGAACGAGCCAGAGACGACGAACCGAAGCTGCTTAGATTTTTACACAGGAATTTTCGGGCTTGAAAAATCAAGAATCATGGAGAAAGTTCATCAAGCTCTTGAAGAGCTCAAAACAATGGCTGCCGCCGGCGACCCACTTTGGGTCCGTAGCGTGGAGACCGGAAGACAGATTTTAAACTACGATGAGTACTTGAAAACCTTTCATCACAACAATAATAATTCTAACACTCGTTGGCTCAAAACACACATTGAGGCCTCTCGTGAGACCGCTCTTGTCTTCATGGAGCCCTCTAGGTTGGTTCAAAGCTTCATGGATGAGAATAAATGGAAGGAGATGTTTCCTTTCATGATATCGAAGGCAGCTACAGTTGATGTTATTTGTAATGGAGAGGCTGCCAATTGGAATAATGGAGCAGTGCAATTGATGTTTGCAGAGGTGCAAATGCTTACACCATTAGTACCCACGAGAGAAATGTATTTCATCCGCCATTGCAAGCAGCTCGACATTGAACAATGGGCTATTGTCGATGTTTCGATCGAAAACATTGAAGATAACAATATTGATGCATCGTTGGTGAAATATAAGAAACGTCCATCTGGTTGCATCATTAAGGATGAATCTAATGGCCATTGCAAGGTAACAATGGTGGAGCATTTGGAATGTGAAAAAAGCAAAGTTCACAACTTGTACAGAAGCATAGTGAACAATGGCACTGCCTTTGGGGCAAGACATTGGATGGCAACTCTCCAACTCCAATGTGAACGCCTTGCTTTCTTCATGGCAACCAACATCCCCATGAAAGACTCAACTGGAGTTGCAACACTAGCTGGAAGAAAAAGCACATTAAAGTTGGCACAGAGAATGAGTTGCAGCTTCTCCCAAGTAGTTGCAGCTTCAAGTTATCAAACATGGACCAAAGTTGTGGGAAAAACTGGAGAAGATATTAGGGTTTGTTCAAGGAAGAATGTTAGTGACCCTGGTGAACCCATTGGAGTTATTTTATGTGCAGTTTCTTCTCTCTGGTTGCCTCTTTCTCCCCATCTTCTCTTCGATTTCTTCAGAGATGAATCTCGTCGAAATCAATGGGACGCTATGTTTGGTGGAGATAAAGCTAAGTCCATTGCAAATTTAGCTAAAGGACAGGATCGAGGCAACTCAGTTACCATTCAAACAATAGGATCAAAAGAGAGCAACAACATGTGGATCCTACAAGACAGCTCCACAAACTTATCGGAATCCATGGTGGTCTACTCCGGAGTAGACGTTACCAGCATGCAGTCAGTGATGTCAGGTTGTGATTCCGGCAGCGTTACCATCCTCCCTTCAGGCTTTTCAATTCTCCCCGACGGCGCCAACGCCAGGCCGCCCCTCCTCATCACTCGTTGTAAAGACGACAGAACTTCCGACGCTCATGGTGGTGTTCTACTGACCGCCGCCATCCAAATCCTTACCGACACCTCTCCCTCTGCAAAACCCACCATGGAATCCATCGAGTACGTTAAAAGCATCATTTGTTGTACGTTAAAAAATATTAGAACCAGCATGTGCTGTGAGGATGATTGATACTTATATAGCTTATTATAATATTATTGATCCATATATATATAACTGTAAGTAAAGCTTTTCTTTTTTC 2494 44.55 MGADMSNNNNNTNRLAFTKDFFSSPALSLTLAGIFRRGEVTEKGDVEMEEVDDGARRDDTTAELSSENSGPMRSRSDDEGLDGGGGENEDGVDHGCHVKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKVGCANCGISDAGEDHVALTTTEQLRIKNAKLKAEVEKLRAALGKYPQAAASPSYSSGNEPETTNRSCLDFYTGIFGLEKSRIMEKVHQALEELKTMAAAGDPLWVRSVETGRQILNYDEYLKTFHHNNNNSNTRWLKTHIEASRETALVFMEPSRLVQSFMDENKWKEMFPFMISKAATVDVICNGEAANWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDIEQWAIVDVSIENIEDNNIDASLVKYKKRPSGCIIKDESNGHCKVTMVEHLECEKSKVHNLYRSIVNNGTAFGARHWMATLQLQCERLAFFMATNIPMKDSTGVATLAGRKSTLKLAQRMSCSFSQVVAASSYQTWTKVVGKTGEDIRVCSRKNVSDPGEPIGVILCAVSSLWLPLSPHLLFDFFRDESRRNQWDAMFGGDKAKSIANLAKGQDRGNSVTIQTIGSKESNNMWILQDSSTNLSESMVVYSGVDVTSMQSVMSGCDSGSVTILPSGFSILPDGANARPPLLITRCKDDRTSDAHGGVLLTAAIQILTDTSPSAKPTMESIEYVKSIICCTLKNIRTSMCCEDD 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 86204778 86214520 + XM_039048797.1 Bhi01g03413 26186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03413 765 SUPERFAMILY Bet v1-like 543 696 - -
Bhi01g03413 765 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Bhi01g03413 765 ProSiteProfiles START domain profile. 263 503 IPR002913 GO:0008289
Bhi01g03413 765 Gene3D - 274 500 IPR023393 -
Bhi01g03413 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 20 760 - -
Bhi01g03413 765 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Bhi01g03413 765 MobiDBLite consensus disorder prediction 45 63 - -
Bhi01g03413 765 CDD homeodomain 101 156 IPR001356 GO:0003677
Bhi01g03413 765 Gene3D - 92 172 - -
Bhi01g03413 765 SUPERFAMILY Homeodomain-like 89 159 IPR009057 -
Bhi01g03413 765 Coils Coil 209 229 - -
Bhi01g03413 765 MobiDBLite consensus disorder prediction 45 108 - -
Bhi01g03413 765 CDD START_ArGLABRA2_like 267 499 - -
Bhi01g03413 765 SUPERFAMILY Bet v1-like 265 501 - -
Bhi01g03413 765 SMART HOX_1 100 162 IPR001356 GO:0003677
Bhi01g03413 765 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Bhi01g03413 765 MobiDBLite consensus disorder prediction 72 97 - -
Bhi01g03413 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 760 IPR042160 -
Bhi01g03413 765 Coils Coil 157 187 - -
Bhi01g03413 765 Pfam START domain 276 500 IPR002913 GO:0008289
Bhi01g03413 765 SMART START_1 272 500 IPR002913 GO:0008289
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03413 Bhi-Chr1:86204778 Bhi05g01315 Bhi-Chr5:46309184 0 dispersed
Bhi01g03413 Bhi-Chr1:86204778 Bhi09g00165 Bhi-Chr9:3609772 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
313 PF01852 START 3.10E-53 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03413 K09338 - csv:101221341 1330.47