Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03460 ATGGTGACGCCGTTGACAGGGCTACAACACAGGGACGGTGGCGGAGGAGTGGCTTTTTTGGCTAATTCTGTAAATAAAATGGATTCCGCTTCGTCTCCGTCGTCGCCCAATGATTGTTTGAGGAGCTCCGAGCCACAGTCTCCGATTCTTATTTTCCTTTTCTTCCACAAAGCAATTCGCAATGAGCTCGATACGCTTCACCGGCTAGCCATGGCCTTCGCTACCGGCCAGCGAGCAGATATTAGGCCGCTATTTGAACGATACCATTTTTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATTTTTCCTGCCCTTGATATTCGCGTGAAGAATGTGGCACAAACATATTCTCTTGAACACAAGGGTGAAAGCAATTTGTTTGATCATCTTTTTGAGCTTCTTAATTGTAATACACAAAATGACGAAAGCTTCCCAAGGGAGTTAGCATCCTGCACTGGTGCCTTAAAGACATCTGTGAGCCAGCACATGGCTAAGGAAGAAGAGCAGGTATTTCCCTTGCTTATAGAAAAGTTCTCAATTGAAGAGCAGGCATCTCTCGTTTGGCAGTTCTTCTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGCTTTCATCATCTGTTTCACCTGATGAATTTCAGGATCTACAGAAATGCTTGATTAAGGTAGTCCCTGAGGAAAAACTTCTCCAACAGGTCATATTTACTTGGATGGAAGCGAGAAGTTGTGACGATCTATCAACAAGTTGGTTTGGTGATTCTCTAGTTGGACATCATACAGATCCTGCTACTGATACATCAAATCATCAAACCGAAAATGTAAATTGTGCTTGTGAATTGGCCAGCCATGGAAAAAGAAAATACTTGGAGTCAAGTTCTGAGACATCAGATTATGTGGCAACTCATCCAATCAATGAAATACTGTTTTGGCATAATGCCATCAAAAGAGAGCTGAATGACATAGCTGAGGAGGCTAGGAAGATACAACTTTCTGGGAACTTCAGTAATCTATCAACTTTTAACGAGAGGTTGCAATTCATAGCTGAAGTTTGCATATTTCATAGTATTGCCGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTCTCCAGGAACATGCCGAAGAAGAAAGTCAATTCAATGAGTTTAGGTGCCTGATTGAAAATATTCAAAGTGCAGGGGCTAGTTCTACTTCAAGAGCTGAGTTTTATGTGAAGTTGTGTTCTCATGCTGATCAAATAATGGATACCATTAAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTCAGTTTCAAGAGACAACGGGAATTATTGTATCAAAGCTTGTGCATGATGCCTTTGAAATTGATTGAACGGGTCTTGCCATGGCTGGTAGGATCAGTGAAAGAAGTTGAAGCTAGAGATATACTCAAGAACATTCAGTTGGCAGCTCCAGCTAAAGATACTGCTCTGGTGACTCTCTTTTCTGGTTGGGCTTGCAAAGCGCGTAATAATGGTTTGTGCTTGTCTTCAAGAGCAGTTGGCTGTTGTGCAGTTAAAAGGCTTACTGACATTGAAGAAGACATTGTTCAATCATCTTGTTCATGTGCCCCTGCATTGGCTGCAAGGGAAAGTCCAAAATCAGATCCCGAAACTAATGGTAATGTCAAGAGGCCAGCCATACGAAATGTATCAATGGCATGCAGAAGCTGTGATGGCCGTATTGCTTTGGAGACTGTTAATATCCAACAGCAATGTTGTAGTGATCAGTCCTGCCATGTTCCAGCTTTAGGAGTAAACATCAAGAATCTGGGGTTAAGTTCTATTTTCACTTCCAAGTCTATGCGATCTTTATCTCCCAGCTCTTGTGCACCATCTCTCAATTCCAGCCTTTTTTCATGGGAAACGGATTGTGCCTCTTCTGATGTTGGGTCTGCAGGACGTCCTATTGATACTATTTTTAAATTTCACAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTAGTGATTGTGATGGAACATTTCTCCGGCAATTTATTGGAAGATTTCGCCTTCTATGGGGGTTATATAGAGCCCATAGTAATGCTGAAGATGATATCGTATTTCCTGCTCTGGAATCCAAAGAGACATTGCACAATGTAAGTCACTCGTATACACTAGACCATAAGCAGGAGGAAAAATTATTTGAGGACATTTCATGTGTTCTCTCTGAGATTTCACTCCTCCATGAAAGTTTGCATGAGGTTCCGTTGGATGAGAGTTTTTCCAGAAGTATTGTTGGGTCTGTTAATGTGGTGGGGAAGGATTGTAACAGAAAATACAACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTATAAGAGTCACTCTGGATCAGCATATATTTAGGGAAGAACTTGAACTTTGGCCGCTGTTTGGGAAACACTTCTCCATAGAAGAGCAAGACAAAATAGTTGGCCGTATCATTGGAACCACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACAGCAGCACTTACTCAGGACGAACAGAATACTATGATGGATACATGGAAGCAAGCCACAAAAAACACCATGTTCAATGAATGGCTCAATGAATGTTGGAGAGGGACTGCGTCGTCTACTTTAAATGGTGAAACATCAGAAGCATGTGTTGCCGGAAAAGATTCTGGGCTCATTGAGAGCTTGGATCAGAATGATCAAATGTTCAAGCCTGGTTGGAAAGATATTTTTCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGATTCGACTCTTGATCCAAGGAGAAAAGCATATCTCGTGCAGAATCTTATGACCAGTCGCTGGATTGCTGCACAGCAGAAATTACCTCAAACAAATGTTGAAGATAATTCCAATGGTGAAGATGTAGCAGGACGAACAGCATCTTTTCGCTGTGCTGAGAAAAATGTGTTTGGGTGTGAACATTACAAAAGAAACTGCAAGCTTCTTGCTGCTTGCTGTGGGAAGTTATTTACCTGTCGATTCTGTCATGACAATGTCAGCGATCACTCAATGGACAGGAAAGCAACATCAGAGATGATGTGCATGAACTGTCTAACAATTCAACCAGTTGGGCCAATATGTACAACACCTTCTTGCAATGGATTGTCAATGGCGAAATACTATTGCAATATTTGCAAATTTTTTGATGATGAAAGGGCCGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGAATTGATTTTTTCCATTGCATGATTTGCAATTGTTGTCTTGGGATAAAGCTGGAGAGCCATAAGTGCCTGGAGAAAAGTTTAGAAACGAATTGTCCCATCTGTTGTGATTTCTTATTTACATCCAGTGCAACAGTCCGACCTCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCTTACACTTGCAGCCATTATACCTGTCCTATTTGTAGCAAGTCCTTGGGAGATATGGCGGTTTATTTTGGCATGCTTGACGCCTTGTTGGCTGCTGAGGAGCTGCCGGAAGAGTACAGGGATCGTTGCCAGGACATATTGTGCAATGACTGTGAGCGGAAAGGCACATCGCGGTTCCATTGGCTATATCATAAATGTGGGTTTTGTGGATCATACAACACTCGGGTGATCAAGAATGATAGCACATCTGCTGATTGCCCCGCTTCCAATTAGTGAGAGATTTCTTTTACGGTGACAAAAAGTATATATTCACGCCTTTTTATTGCTTTCATTTGTACATATTGATGTCGATCCCTCTCCACCAGGAAACTGGTTTTTTGTTACATCTAATATACACACAACACGTTGTTCATATCGGTCTCTATGTAGATGTCCTTTTTATATGGCTTCAAGATTCATCATCCGAACTGTAAAATTGAATTTACTTTGAAAATTCAATATTCATAGAACAACATCATTGTCTATGTGTTAA 4027 41.45 MVTPLTGLQHRDGGGGVAFLANSVNKMDSASSPSSPNDCLRSSEPQSPILIFLFFHKAIRNELDTLHRLAMAFATGQRADIRPLFERYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNCNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFSIEEQASLVWQFFCSIPVYMMAQFLPWLSSSVSPDEFQDLQKCLIKVVPEEKLLQQVIFTWMEARSCDDLSTSWFGDSLVGHHTDPATDTSNHQTENVNCACELASHGKRKYLESSSETSDYVATHPINEILFWHNAIKRELNDIAEEARKIQLSGNFSNLSTFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFLQEHAEEESQFNEFRCLIENIQSAGASSTSRAEFYVKLCSHADQIMDTIKRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSVKEVEARDILKNIQLAAPAKDTALVTLFSGWACKARNNGLCLSSRAVGCCAVKRLTDIEEDIVQSSCSCAPALAARESPKSDPETNGNVKRPAIRNVSMACRSCDGRIALETVNIQQQCCSDQSCHVPALGVNIKNLGLSSIFTSKSMRSLSPSSCAPSLNSSLFSWETDCASSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDGTFLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISLLHESLHEVPLDESFSRSIVGSVNVVGKDCNRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFSIEEQDKIVGRIIGTTGAEVLQSMLPWVTAALTQDEQNTMMDTWKQATKNTMFNEWLNECWRGTASSTLNGETSEACVAGKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQTNVEDNSNGEDVAGRTASFRCAEKNVFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTIQPVGPICTTPSCNGLSMAKYYCNICKFFDDERAVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCERKGTSRFHWLYHKCGFCGSYNTRVIKNDSTSADCPASN 1255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87715669 87726066 + XM_039022143.1 Bhi01g03460 26233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03460 1255 Gene3D - 1207 1251 - -
Bhi01g03460 1255 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 31 1252 - -
Bhi01g03460 1255 CDD Hr-like 51 177 - -
Bhi01g03460 1255 ProSiteProfiles Zinc finger RING-type profile. 1136 1178 IPR001841 -
Bhi01g03460 1255 ProSiteProfiles Zinc finger CHY-type profile. 1000 1069 IPR008913 GO:0008270
Bhi01g03460 1255 CDD Hr-like 662 822 - -
Bhi01g03460 1255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1129 1180 IPR013083 -
Bhi01g03460 1255 PANTHER CHY ZINC FINGER PROTEIN 31 1252 - -
Bhi01g03460 1255 Gene3D nmb1532 protein domain like 312 459 - -
Bhi01g03460 1255 Gene3D nmb1532 protein domain like 46 196 - -
Bhi01g03460 1255 SMART ring_2 1136 1177 IPR001841 -
Bhi01g03460 1255 CDD RING-H2_Pirh2 1135 1178 - -
Bhi01g03460 1255 Gene3D nmb1532 protein domain like 655 887 - -
Bhi01g03460 1255 SUPERFAMILY Zinc hairpin stack 1073 1129 IPR037275 -
Bhi01g03460 1255 CDD Hr-like 313 441 - -
Bhi01g03460 1255 ProSiteProfiles Zinc finger CTCHY-type profile. 1072 1135 IPR017921 -
Bhi01g03460 1255 Pfam Hemerythrin HHE cation binding domain 309 443 IPR012312 -
Bhi01g03460 1255 Pfam Hemerythrin HHE cation binding domain 660 823 IPR012312 -
Bhi01g03460 1255 Pfam Hemerythrin HHE cation binding domain 53 179 IPR012312 -
Bhi01g03460 1255 SUPERFAMILY CHY zinc finger-like 1001 1063 IPR037274 GO:0008270
Bhi01g03460 1255 Pfam Zinc-ribbon 1183 1240 IPR039512 -
Bhi01g03460 1255 Pfam CHY zinc finger 1007 1082 IPR008913 GO:0008270
Bhi01g03460 1255 SUPERFAMILY RING/U-box 1135 1181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03460 Bhi-Chr1:87715669 Bhi07g01299 Bhi-Chr7:39920194 0 dispersed
Bhi01g03459 Bhi-Chr1:87715366 Bhi01g03460 Bhi-Chr1:87715669 0 tandem
Bhi01g03460 Bhi-Chr1:87715669 Bhi01g03461 Bhi-Chr1:87715843 2.86E-17 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03460 K16276 - csv:101215023 2440.61