Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03461 ATTCGCAATGAGCTCGATACGCTTCACCGGCTAGCCATGGCCTTCGCTACCGGCCAGCGAGCAGATATTAGGCCGCTATTTGAACGATACCATTTTTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGAGCTCTGCTGTTGTCTGTAAGGAAGTAGTTCAACTGAATGTAGTTCGGAGGGGGATGATAGGAATACTGAGGATTCAACAATAATGAGCTTGTACATTAAATTAAATATGAAAGGAGCTATCAAGACAAGAGTCAGTTGTTGGATTTTTTTGATTTGACTAGATATGAATTTCTAGTGGCTTTTGCTGCCTCCTGCTTGAAAAAGGAGTGAGTTAGAAGAAGCTGTCTTACAAAGGCTGCAATGAGCCATGGGATATTATTTTGCAACATTGAGCTTTTTATCCTATATTTTATAAAAATGGCCATGGGGTTCAAACACCCCTTCTGTGAGAGAACAGCTGGATTAACAGAAATTTCTGGGATGGATTATCAGGAATGTTACAATGTTCTTATTTTCCTCTGTTCATTTTCTTCCCACTTGCTGTTACAATCCTTACTTCTAAAAACATATATCTGGACTTGCAGGTAATTTTTCCTGCCCTTGATATTCGCGTGAAGAATGTGGCACAAACATATTCTCTTGAACACAAGGGTGAAAGCAATTTGTTTGATCATCTTTTTGAGCTTCTTAATTGTAATACACAAAATGACGAAAGCTTCCCAAGGGAGTTAGCATCCTGCACTGGTGCCTTAAAGACATCTGTGAGCCAGCACATGGCTAAGGAAGAAGAGCAGGTATTTCCCTTGCTTATAGAAAAGTTCTCAATTGAAGAGCAGGCATCTCTCGTTTGGCAGTTCTTCTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGCTTTCATCATCTGTTTCACCTGATGAATTTCAGGATCTACAGAAATGCTTGATTAAGGTAGTCCCTGAGGAAAAACTTCTCCAACAGGTCATATTTACTTGGATGGAAGCGAGAAGTTGTGACGATCTATCAACAAGTTGGTTTGGTGATTCTCTAGTTGGACATCATACAGATCCTGCTACTGATACATCAAATCATCAAACCGAAAATGTAAATTGTGCTTGTGAATTGGCCAGCCATGGAAAAAGAAAATACTTGGAGTCAAGTTCTGAGACATCAGATTATGTGGCAACTCATCCAATCAATGAAATACTGTTTTGGCATAATGCCATCAAAAGAGAGCTGAATGACATAGCTGAGGAGGCTAGGAAGATACAACTTTCTGGGAACTTCAGTAATCTATCAACTTTTAACGAGAGGTTGCAATTCATAGCTGAAGTTTGCATATTTCATAGTATTGCCGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTCTCCAGGAACATGCCGAAGAAGAAAGTCAATTCAATGAGTTTAGGTGCCTGATTGAAAATATTCAAAGTGCAGGGGCTAGTTCTACTTCAAGAGCTGAGTTTTATGTGAAGTTGTGTTCTCATGCTGATCAAATAATGGATACCATTAAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTCAGTTTCAAGAGACAACGGGAATTATTGTATCAAAGCTTGTGCATGATGCCTTTGAAATTGATTGAACGGGTCTTGCCATGGCTGGTAGGATCAGTGAAAGAAGTTGAAGCTAGAGATATACTCAAGAACATTCAGTTGGCAGCTCCAGCTAAAGATACTGCTCTGGTGACTCTCTTTTCTGGTTGGGCTTGCAAAGCGCGTAATAATGGTTTGTGCTTGTCTTCAAGAGCAGTTGGCTGTTGTGCAGTTAAAAGGCTTACTGACATTGAAGAAGACATTGTTCAATCATCTTGTTCATGTGCCCCTGCATTGGCTGCAAGGGAAAGTCCAAAATCAGATCCCGAAACTAATGGTAATGTCAAGAGGCCAGCCATACGAAATGTATCAATGGCATGCAGAAGCTGTGATGGCCGTATTGCTTTGGAGACTGTTAATATCCAACAGCAATGTTGTAGTGATCAGTCCTGCCATGTTCCAGCTTTAGGAGTAAACATCAAGAATCTGGGGTTAAGTTCTATTTTCACTTCCAAGTCTATGCGATCTTTATCTCCCAGCTCTTGTGCACCATCTCTCAATTCCAGCCTTTTTTCATGGGAAACGGATTGTGCCTCTTCTGATGTTGGGTCTGCAGGACGTCCTATTGATACTATTTTTAAATTTCACAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTAGTGATTGTGATGGAACATTTCTCCGGCAATTTATTGGAAGATTTCGCCTTCTATGGGGGTTATATAGAGCCCATAGTAATGCTGAAGATGATATCGTATTTCCTGCTCTGGAATCCAAAGAGACATTGCACAATGTAAGTCACTCGTATACACTAGACCATAAGCAGGAGGAAAAATTATTTGAGGACATTTCATGTGTTCTCTCTGAGATTTCACTCCTCCATGAAAGTTTGCATGAGGTTCCGTTGGATGAGAGTTTTTCCAGAAGTATTGTTGGGTCTGTTAATGTGGTGGGGAAGGATTGTAACAGAAAATACAACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTATAAGAGTCACTCTGGATCAGCATATATTTAGGGAAGAACTTGAACTTTGGCCGCTGTTTGGGAAACACTTCTCCATAGAAGAGCAAGACAAAATAGTTGGCCGTATCATTGGAACCACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACAGCAGCACTTACTCAGGACGAACAGAATACTATGATGGATACATGGAAGCAAGCCACAAAAAACACCATGTTCAATGAATGGCTCAATGAATGTTGGAGAGGGACTGCGTCGTCTACTTTAAATGGTGAAACATCAGAAGCATGTGTTGCCGGAAAAGATTCTGGGCTCATTGAGAGCTTGGATCAGAATGATCAAATGTTCAAGCCTGGTTGGAAAGATATTTTTCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGATTCGACTCTTGATCCAAGGAGAAAAGCATATCTCGTGCAGAATCTTATGACCAGTCGCTGGATTGCTGCACAGCAGAAATTACCTCAAACAAATGTTGAAGATAATTCCAATGGTGAAGATGTAGCAGGACGAACAGCATCTTTTCGCTGTGCTGAGAAAAATGTGTTTGGGTGTGAACATTACAAAAGAAACTGCAAGCTTCTTGCTGCTTGCTGTGGGAAGTTATTTACCTGTCGATTCTGTCATGACAATGTCAGCGATCACTCAATGGACAGGAAAGCAACATCAGAGATGATGTGCATGAACTGTCTAACAATTCAACCAGTTGGGCCAATATGTACAACACCTTCTTGCAATGGATTGTCAATGGCGAAATACTATTGCAATATTTGCAAATTTTTTGATGATGAAAGGGCCGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGAATTGATTTTTTCCATTGCATGATTTGCAATTGTTGTCTTGGGATAAAGCTGGAGAGCCATAAGTGCCTGGAGAAAAGTTTAGAAACGAATTGTCCCATCTGTTGTGATTTCTTATTTACATCCAGTGCAACAGTCCGACCTCTACCCTGTGGTCATTACATGCATTCAGCTTGCTTTCAGGCTTACACTTGCAGCCATTATACCTGTCCTATTTGTAGCAAGTCCTTGGGAGATATGGCGGTTTATTTTGGCATGCTTGACGCCTTGTTGGCTGCTGAGGAGCTGCCGGAAGAGTACAGGGATCGTTGCCAGGACATATTGTGCAATGACTGTGAGCGGAAAGGCACATCGCGGTTCCATTGGCTATATCATAAATGTGGGTTTTGTGGATCATACAACACTCGGGTGATCAAGAATGATAGCACATCTGCTGATTGCCCCGCTTCCAATTAGTGAGAGATTTCTTTTACGGTGACAAAAAGTATATATTCACGCCTTTTTATTGCTTTCATTTGTACATATTGATGTCGATCCCTCTCCACCAGGAAACTGGTTTTTTGTTACATCTAATATACACACAACACGTTGTTCATATCGGTCTCTATGTAGATGTCCTTTTTATATGGCTTCAAGATTCATCATCCGAACTGTAAAATTGAATTTACTTTGAAAATTCAATATTCATAGAACAACATCATTGTCTATGTGTTAA 4319 40.66 MLQCSYFPLFIFFPLAVTILTSKNIYLDLQVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNCNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFSIEEQASLVWQFFCSIPVYMMAQFLPWLSSSVSPDEFQDLQKCLIKVVPEEKLLQQVIFTWMEARSCDDLSTSWFGDSLVGHHTDPATDTSNHQTENVNCACELASHGKRKYLESSSETSDYVATHPINEILFWHNAIKRELNDIAEEARKIQLSGNFSNLSTFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFLQEHAEEESQFNEFRCLIENIQSAGASSTSRAEFYVKLCSHADQIMDTIKRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSVKEVEARDILKNIQLAAPAKDTALVTLFSGWACKARNNGLCLSSRAVGCCAVKRLTDIEEDIVQSSCSCAPALAARESPKSDPETNGNVKRPAIRNVSMACRSCDGRIALETVNIQQQCCSDQSCHVPALGVNIKNLGLSSIFTSKSMRSLSPSSCAPSLNSSLFSWETDCASSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDGTFLRQFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISLLHESLHEVPLDESFSRSIVGSVNVVGKDCNRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFSIEEQDKIVGRIIGTTGAEVLQSMLPWVTAALTQDEQNTMMDTWKQATKNTMFNEWLNECWRGTASSTLNGETSEACVAGKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQTNVEDNSNGEDVAGRTASFRCAEKNVFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTIQPVGPICTTPSCNGLSMAKYYCNICKFFDDERAVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCERKGTSRFHWLYHKCGFCGSYNTRVIKNDSTSADCPASN 1181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87715843 87726066 + XM_039022145.1 Bhi01g03461 26234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03461 1181 SUPERFAMILY Zinc hairpin stack 999 1055 IPR037275 -
Bhi01g03461 1181 ProSiteProfiles Zinc finger CHY-type profile. 926 995 IPR008913 GO:0008270
Bhi01g03461 1181 ProSiteProfiles Zinc finger CTCHY-type profile. 998 1061 IPR017921 -
Bhi01g03461 1181 CDD Hr-like 239 367 - -
Bhi01g03461 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1055 1106 IPR013083 -
Bhi01g03461 1181 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 29 1178 - -
Bhi01g03461 1181 Gene3D nmb1532 protein domain like 29 122 - -
Bhi01g03461 1181 Gene3D nmb1532 protein domain like 238 385 - -
Bhi01g03461 1181 CDD RING-H2_Pirh2 1061 1104 - -
Bhi01g03461 1181 Gene3D nmb1532 protein domain like 581 813 - -
Bhi01g03461 1181 SMART ring_2 1062 1103 IPR001841 -
Bhi01g03461 1181 Pfam Hemerythrin HHE cation binding domain 235 369 IPR012312 -
Bhi01g03461 1181 Pfam Hemerythrin HHE cation binding domain 586 749 IPR012312 -
Bhi01g03461 1181 PANTHER CHY ZINC FINGER PROTEIN 29 1178 - -
Bhi01g03461 1181 ProSiteProfiles Zinc finger RING-type profile. 1062 1104 IPR001841 -
Bhi01g03461 1181 SUPERFAMILY CHY zinc finger-like 927 989 IPR037274 GO:0008270
Bhi01g03461 1181 Pfam Zinc-ribbon 1109 1166 IPR039512 -
Bhi01g03461 1181 Pfam CHY zinc finger 933 1008 IPR008913 GO:0008270
Bhi01g03461 1181 CDD Hr-like 588 748 - -
Bhi01g03461 1181 SUPERFAMILY RING/U-box 1061 1107 - -
Bhi01g03461 1181 CDD Hr-like 30 103 - -
Bhi01g03461 1181 Gene3D - 1133 1177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03459 Bhi-Chr1:87715366 Bhi01g03461 Bhi-Chr1:87715843 3.15E-17 dispersed
Bhi01g03461 Bhi-Chr1:87715843 Bhi07g01299 Bhi-Chr7:39920194 4.65E-17 dispersed
Bhi01g03460 Bhi-Chr1:87715669 Bhi01g03461 Bhi-Chr1:87715843 2.86E-17 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03461 K16276 - csv:101215023 2236.84