Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03473 ACAATCCCTGTAATCCAAAAACAATTCCCTTTCTCTTCTTATTATATATAAATATTAACATCCCCTCAGTCCCTCCTTCCATTATCCTAAACCACAGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCATGGCAGATCTTGATTTCACCTCCTCCTTCCCTCTTGAAGATCCAAATTTAGAGCTAATGGCTTCTCACTTTTCTCCTTCAATTCCCAATTTCACTCACTTCTTACCATTCTCCGCTACTACTACTACTACTGATATGTTTTTCCCTTCTCATCAAACCCCAACAAATTTTCCCGAAACTACTTCCTTCACTACTTCCCCCGTTTTACCATCTCACTCTGTTTTGCAATCTCACTCTGTTTTGCCATCTCACTCTGTTTCTACTCATCACTTTCATGATATTAACAAGAGAAAATCTATGGATGTTTCTGAAAGTACTTCTGGAATTTCTACTCCCCAAGTCTCTGAAACTGGGTTCAAGACTAAATATAGCTCTGGGAAAGGGAAGAGATTGAAAAGTATAGAGAAAGAAGAGGAGAAATCTACTAGAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCCACTGATAGCCACAGCTTAGCTGAAAGGGTGAGAAGAGGAAAAATCAATGAAAGACTGAGATGCTTGAAAGACATTGTCCCAGGATGCTACAAGACCATGGGCATGGCAGTAATGTTGGATGAGATAATTAATTATGTCCAGTCTCTGCAGAATCAAGTGGAGTTCCTATCTATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTCAACTCAGAGGCAGATGCCATATCAAAATTACAAAGGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAAAGAAGGATATGGAGGAATGGCTTGCTTCCACTCAAATTTGCCCCTTTGACTTCTATTTCTAGATGTCAACTTCTCATTCCTCAAAACAAAACACTAGGAAAAAAAAAATCATCCATTTCAACTTGTTTTTCTTTTTCTTTTTCTTTTTTTGTTCAGATTTTATAGATAAATTTGGTCCTCAATTAATGATAGTGTACTTAATACAATGGAAATTTATACTTAAAAAATGAAGCTCATTCCACTGGAAATTCTACTGTATGGAGTCACTAGTGTTAAAGAAAAAATATATGTACATTCCATAATATAAGTTGTACAAACAACAATACCCAAGCCTAGAAATTATTCTTTATATTTTGTTCTTTCAGAGAAA 1249 36.35 MADLDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFSATTTTTDMFFPSHQTPTNFPETTSFTTSPVLPSHSVLQSHSVLPSHSVSTHHFHDINKRKSMDVSESTSGISTPQVSETGFKTKYSSGKGKRLKSIEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKAHEAKELERLMKEGYGGMACFHSNLPL 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 87815370 87817504 + XM_039046573.1 Bhi01g03473 26246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03473 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 3 264 IPR024097 GO:0006355
Bhi01g03473 265 MobiDBLite consensus disorder prediction 128 160 - -
Bhi01g03473 265 CDD bHLH_AtBPE_like 144 229 - -
Bhi01g03473 265 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Bhi01g03473 265 PANTHER TRANSCRIPTION FACTOR BEE 1 3 264 - -
Bhi01g03473 265 MobiDBLite consensus disorder prediction 98 160 - -
Bhi01g03473 265 Coils Coil 231 251 - -
Bhi01g03473 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 222 IPR036638 GO:0046983
Bhi01g03473 265 MobiDBLite consensus disorder prediction 101 122 - -
Bhi01g03473 265 Gene3D - 150 222 IPR036638 GO:0046983
Bhi01g03473 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Bhi01g03473 265 SMART finulus 160 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01929 Bhi-Chr1:42459703 Bhi01g03473 Bhi-Chr1:87815370 7.64E-46 dispersed
Bhi01g03473 Bhi-Chr1:87815370 Bhi04g01989 Bhi-Chr4:51525676 3.34E-56 dispersed
Bhi01g03473 Bhi-Chr1:87815370 Bhi01g03474 Bhi-Chr1:87815370 1.73E-156 tandem
Bhi01g03473 Bhi-Chr1:87815370 Bhi08g01233 Bhi-Chr8:38241415 8.96E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
317 PF00010 HLH 4.50E-05 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03473 - - cmo:103494130 448.743