Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03484 GAGAACGACCAAAACTGGAAAACTACCCGTTTTCTTGGAAAACCACTTGCGGCCATCATTACAAAAACAAAACCCACCGTCGATTCCTTCCCCACTTTTCCATTCTCTTCTTCCATCGTCTTCTCTCTCAATTTTTTTCATCGCAAATCCAATTCCTTCACCATGCGTATGAGCTGTAACGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGGCCTGCTCAATCAGACCTTGTCTTCAATGGATCAAATCCCCCCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGTGCTGGCCTTGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGCTATCTTTAAATCTTTGCTATTCGAGGCATGTGGCCGGATTGTGAATCCCATTTTTGGGTCCGCTGGATTGTTGTGGTCCGGGAGCTGGCAGCTCTGCCAGGACGCCGTCGAAGCTGTTCTAAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAAACAGCGGCGTCGCACATGGGTCCACCTTTGAAAGGCTGCGATATCCGCCATGTCTCCAAACAGCAAGGCTCCGCCTCTGATTCCGCGCTCAGGAAGATCAAGACGCGAAGGCGGTTCAAACGCTCTGCGGCGAAGTTGAAGCCAAAGCAGGAGCCGGTTGTGGTGGTGCCCGAGTTCAAATTCGACGACCCGACCCGGACTGTATCGGAGCCTCGGTGTCTGAAGTTCGAGTTGGATAATTGGGAGAGTCGTGAGTCGCCGGAGAAGGACTGCGGTAGCGACGACACCGAGTGCTTGTCGGTGGAGACAGTGGAGGCTTCTCCGGTGGGCCAGGGTGGTGACGTGGAATTAGAACTTACTTTAGGGTTTGGGCACAGTCGGATGCTGACATGACTAGATCGAGGACTATAAGAACGCCACGTGTAAAGATAGATGTATGATTTTGGTCTCACAGATTTGGCTTTTGATGTTGTACAAAACCAAATGAGTTTTTTCTTTTTATCTTCCTTTTGTTGAGGTTAGATTTAGGGTTTGTGAAGTGTTAGTCAAATTGGATATTGTTATATTTGTATTTGAAAGAAAGAATAATTAATATATTGAATCACATGTTCACGGTA 1124 49.2 MRMSCNGCRVLRKGCSEACSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSASDSALRKIKTRRRFKRSAAKLKPKQEPVVVVPEFKFDDPTRTVSEPRCLKFELDNWESRESPEKDCGSDDTECLSVETVEASPVGQGGDVELELTLGFGHSRMLT 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 88094124 88095350 + XM_039043001.1 Bhi01g03484 26257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03484 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 239 - -
Bhi01g03484 245 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bhi01g03484 245 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Bhi01g03484 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03484 Bhi-Chr1:88094124 Bhi03g01024 Bhi-Chr3:20415858 1.34E-51 dispersed
Bhi01g01915 Bhi-Chr1:42161248 Bhi01g03484 Bhi-Chr1:88094124 2.67E-93 transposed
Bhi01g03484 Bhi-Chr1:88094124 Bhi07g01321 Bhi-Chr7:40406262 4.11E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
320 PF03195 LOB 7.00E-22 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03484 - - csv:101219232 438.343