Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g03681 ATGACTTCTTCAATTCTCCTCCACTTCGAATTCAGGCCACAAATGGTGATCGCTATGGCGCTCGATTTCCTTCTCCCCTCCTGGTTGGAGATCGAGATCACTCTCGCTACTTCTCTCTTTGTGATTCTCGCTTACTGGTTTTTCGCTCACTGGAGTGGGTTATTTGATGCTGATCGTTCTCTGATTGATGGTTCTGGGGATGGTATTCACGTTAAGGACAAGATTCCCCCTGGTCATTTAAGAGACCTTCAAACTAATTCTGCTTATCTAATTAAGTTGGAATTGTTGGCTGCAAAGAATCTTATAGCTGCAAACTTGAATGGCACTTCTGATCCTTATGCTATCATTACCTGTGGTACAGAAAAGCGCTTCAGTTCAATGATTCCTGGTTCAAGGAATCCCATGTGGGGAGAGGAGTTCAATTTTTCCGTTGATGAGCTTCCTGTGCAGATTAATGTTACAATTTATGATTGGGATATAGTTTGGAAAAGTGCTGTTCTTGGTTCTGTTACTGTTACAGTTGAAAGTGAAGGCCACACAGGTGCTGTGTGGTACTCATTGGATAGTCCTTCTGGGCAGGTTTGTCTCCACATTAAAACTATAAAATTGCCAGTGAATGCCGGAAGCACAGTTAATGCTTATGCGGGAGCAAATGCTCGAAGAAGAATTTCTTTAGACAAACCAGAGCTGACAGTGGTTCATCAAAAGCCAGGGCCTCTCCAGACAATCTTTGAGCTTCTACCTGATGAGATTGTTGAGCATAGTTTTTCTTGTGCTCTTGAGAGATCATTCTTGTACCATGGTCGTATGTATGTCTCTTCTTGGCACATTTGCTTCCACTCTAACATCTTCTCCAAGCAAATGAAGGTGGTTATACCACTAGGAGATATTGATGAAATACGAAGAACTCAACATGCATTTATCAATCCTGCTGTAACAATTATTCTTCGTATGGGTGCTGGTGGGCATGGCGTACCTCCATTGGGAAGTCCTGATGGTAGAGTGAGATATAAATTTGCATCATTTTGGAATAGGAACCATGTAGTTAGAGCTTTACAGCGCTCAGTGAAGAACTTCCGTGAAATGTTGGAAGCTGAGAAGAAGGAGAAGGCTGAGTCAGCATTACGTGCACATAGTAGCTCTGTCAGAGTAAGTGAAAGTAAGGAAAAGATCACCGCTGATCATTTGCCCAATGATCATTTGCCCAAAAGTAAAAATACTCAGGCATTCCTTAAAGAGGAGGTTCTTGCAAGCATACACAATGGTGTTTTTCCGTGCTCTCCCGAGCAGTTCTTTACTACGCTGTTGAGTGATGGATCAGGTTACACAAGTGCTTTTGTTTTGAGACGGAAAGATACAAATCTAGTTATGGGACAGTGGCATGCTGCAGATGAATATGAAGGTCAAGTCAGAGAGCTTACATATAGATCCCTGTGTCATAGCCCCATGTGCCCACCAGACACAGCGATGACGGAGTATCAACATGTAGTTTTATCTGAAGATAAAAAAAATTTGGTATTCGAGACAGTACAAAACGCGCACGATGTGCCATTTGGGGCAAACTTTGAGCTCCACTGTAGGTGGTCGTTGGAGAAGAATGCGGAAGACTCTTCATCTATTGATATTAAAGCAGGTGTACATTTTAAGAAATGGTGTCTGATGCAATCCAAAATAAAAGCTGGCGCAATGCTTGAGTACAAGCGAGCTGTGGACCTGAGGATAGAGGTCGCCCTTGATTATATGAACTCGAATTCTTCTGGCAGTGTAACCGAAAAAATTGCATCGGCGGCTCCATCAGAAGCTCAGACCTGATGATTTCCACCAAGGTCAGATCAGATTCCTCCTATACCATACACACTGTAACAATGATATTCTCTCATTTTTCTTCTTCTTTGAACAAGTTTCTTTAAAAGCTTTCTTGGTGTGTGGAAACGAGTTTCATCATATCAGAATAAGTGCTTTGTTTAATAGATTTTGTTTTAATTTTCACCCTGCCTCCTTAGGAGACTGGTGGTGTGTTACGTTTATGCAACTTAAAAAGTGATTTCCATATGGCCCCCTCCTATTGTTTCTTCAAGAAACTACAGAATCTTACCCTTTGTTTTCAGGTAACTCAGAATGTTCATAAGCACATTTACTTTGTAAAGTGATTTAATTTTCACCTACTTTATTCATATCTCGTGTATTTTTATGGAACAACTGTCTAATTTACCATACAGTATTGAGTTATTGGAAAA 2237 41.08 MTSSILLHFEFRPQMVIAMALDFLLPSWLEIEITLATSLFVILAYWFFAHWSGLFDADRSLIDGSGDGIHVKDKIPPGHLRDLQTNSAYLIKLELLAAKNLIAANLNGTSDPYAIITCGTEKRFSSMIPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIVWKSAVLGSVTVTVESEGHTGAVWYSLDSPSGQVCLHIKTIKLPVNAGSTVNAYAGANARRRISLDKPELTVVHQKPGPLQTIFELLPDEIVEHSFSCALERSFLYHGRMYVSSWHICFHSNIFSKQMKVVIPLGDIDEIRRTQHAFINPAVTIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHVVRALQRSVKNFREMLEAEKKEKAESALRAHSSSVRVSESKEKITADHLPNDHLPKSKNTQAFLKEEVLASIHNGVFPCSPEQFFTTLLSDGSGYTSAFVLRRKDTNLVMGQWHAADEYEGQVRELTYRSLCHSPMCPPDTAMTEYQHVVLSEDKKNLVFETVQNAHDVPFGANFELHCRWSLEKNAEDSSSIDIKAGVHFKKWCLMQSKIKAGAMLEYKRAVDLRIEVALDYMNSNSSGSVTEKIASAAPSEAQT 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 94118453 94142806 + XM_039038030.1 Bhi01g03681 26454

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g03681 603 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 18 601 - -
Bhi01g03681 603 CDD C2 91 187 - -
Bhi01g03681 603 Gene3D - 239 358 IPR011993 -
Bhi01g03681 603 Pfam C2 domain 92 187 IPR000008 -
Bhi01g03681 603 SMART C2_3c 90 186 IPR000008 -
Bhi01g03681 603 Gene3D C2 domain 81 203 IPR035892 -
Bhi01g03681 603 ProSiteProfiles C2 domain profile. 71 187 IPR000008 -
Bhi01g03681 603 Pfam GRAM domain 241 305 IPR004182 -
Bhi01g03681 603 PRINTS C2 domain signature 106 118 IPR000008 -
Bhi01g03681 603 PRINTS C2 domain signature 130 143 IPR000008 -
Bhi01g03681 603 PRINTS C2 domain signature 151 159 IPR000008 -
Bhi01g03681 603 ProSiteProfiles VASt domain profile. 412 585 IPR031968 -
Bhi01g03681 603 Coils Coil 349 369 - -
Bhi01g03681 603 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 18 601 IPR044655 -
Bhi01g03681 603 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 88 198 IPR035892 -
Bhi01g03681 603 SMART gram2001c 238 304 IPR004182 -
Bhi01g03681 603 Pfam VAD1 Analog of StAR-related lipid transfer domain 421 563 IPR031968 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g03681 - - - bhj:120082742 1190.64
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00626 Bhi-Chr1:11255134 Bhi01g03681 Bhi-Chr1:94118453 1.44E-15 dispersed
Bhi01g00627 Bhi-Chr1:11255134 Bhi01g03681 Bhi-Chr1:94118453 6.49E-16 dispersed
Bhi01g03681 Bhi-Chr1:94118453 Bhi08g00667 Bhi-Chr8:22958602 7.84E-25 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1323 . . . . . Bpe14g00790 . . . . . . Car06g01428 Car14g01266 . . . Bhi01g03681 . . . . . . . . . . . . . Cone14ag0618 Cone15ag0625 . Cone11ag0673 . . . . . . . Bda13g00539 . . . . . Cmo06g01677 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003689 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 0 7 2 1 46