Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00045 TTTTCGGAAATTAAAAGAAAAAGAAAAAGAAAAAGGAAAGTCATGCTTTCGTTGATGCGTTCGATAAGCTGAGAGTGGAGAAAAATCGGTTAGCTTTGTCCAGAGAAATGGCGAAGCTGCTTCTCCATCTTCAAGCTCCTCATCTCGTTTCTTCCCTCAATCGCGGAACCCTCTCATTCATACTCTCCAAACCACTTCCAATCCTCTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCCTTACAATGCCGCTTCGCTCTTGCTCTCCCCTCTTCTTCTGCTTCACGCCGCTGCTTCTCTGTTCGAGCATTCGACGACTCTGCATCAGAGACTAAACGCATGGAAAGAGAAGAAGCAGACGCTGCAAACGAGGCTTCCATGAGCAGCGATGGCGTCAGGGCTCGTGGTGAGGATTATCCTAGCGGAGAATTTGAGTTCGAGAAGTTTGGCCCGTGGAGGAGCTTTTCGGTGAAGCTTAAGATGCTGGTGGCCTTTCCTTGGGAACGCGTTCGCAAGGGCAGTGTCTTGACTATGAAATTGCGAGGGCAGATATCTGATCAGCTAAAGAGCCGTTTCTCTTCAGGGCTTTCCCTACCTCAAATCTGCGAGAACTTTCTCAAAGCTGCATATGATCCTCGTATTTCTGGGATCTATTTGCAAATTGAGGCTCTAAATTGTGGGTGGGGTAAAGTTGAAGAAATTCGAAGGCATATCCTGAATTTCAAGAAATCAGGTAAATTTATTGTTGCCTATATTCCTACATGTCAAGAGAAAGAATACTACCTGGCATGTGCATGTGAGGAGATATATGCCCCTCCAAGTGCTTATGTTTCTTTGTTTGGTTTGACTGTTCAAGCTTCATTTCTCAGAGGTATTTTTGATAAAATAGGGATTGAACCACAAGTGGAAAGGATAGGTAAATATAAAAGTGCTGGTGATCAACTTGCACGGAGAAATATGTCAGAAGAAAATTGTGAAATGTTGACGACATTGCTTGATAACATCTATGACAACTGGCTGGATAAAATTTCTTCAATAAAAGGAAAGAAAAAGGATGATGTTGAAAACTTTATTAATGAAGGAGTGTACCAAATTGAAAGACTGAAAGAAGATGGCTGGATCACCAATATACAGTATGAGGATGAGGTACTCTCTATGCTAAGTGAAAGACTTGGTCTGCCAAAGGACAAAAAGGTTCCCATGGTTGATTACAGGAAGTACTCTAGAGTTAGGCAATGGACCGTTGGTTTATCAGGAGGTGGAGACCAAATAGCTGTGATTAGAGCTGGAGGAAGCATTACTCGTGTAAAAAGTCCTTTAAGTGTTCCTAGTTCTGGTATTATTGGGGAGCAATTCATTGAGAAGATTCGGAGTGTTAGAGAGTCGAAAAGATTCAAGGCTGCCATCATCAGAATTGACAGTCCTGGAGGCGATGCTCTTGCTTCTGATTTAATGTGGCGAGAAATCAGACTTCTGGCTGCATCAAAACCTGTTGTTGCATCCATGGCTGATGTGGCAGCCAGTGGAGGATACTATATGGCAATGGCAGCTGGGACAATTGTTGCAGAAGATCTAACCTTAACTGGTTCCATTGGAGTTGTCACAGGCAAGTTTAACTTGGGGAAACTATATGAAAAGATTGGCTTTAACAAGGAAATCATATCGAGGGGACGGTTTGCTGAGCTTCTTGCGGCTGAACAACGACCTTTCAGTTTCTGGTCAGACCGGATGAAGCAGAACTCTTTGCCAAGTCTGCACAAAATGCGTACAAGCAATTTCGGGACAAAGCAGCCTTTTCCAGATCCATGACTGTGGATGAGATGGAGAAAGTTGCACAAGGAAGGGTTTGGACTGGTAAAGATGCAGTATCCCGTGGTTTAGTAGATGCTATTGGTGGCTTTTCTAGGGCTGTTGCAATAGCAAAACTGAAAGCCAACATTCCTCAAGACAGCC 1955 43.38 MAKLLLHLQAPHLVSSLNRGTLSFILSKPLPILSSSSSSSSSSSSLQCRFALALPSSSASRRCFSVRAFDDSASETKRMEREEADAANEASMSSDGVRARGEDYPSGEFEFEKFGPWRSFSVKLKMLVAFPWERVRKGSVLTMKLRGQISDQLKSRFSSGLSLPQICENFLKAAYDPRISGIYLQIEALNCGWGKVEEIRRHILNFKKSGKFIVAYIPTCQEKEYYLACACEEIYAPPSAYVSLFGLTVQASFLRGIFDKIGIEPQVERIGKYKSAGDQLARRNMSEENCEMLTTLLDNIYDNWLDKISSIKGKKKDDVENFINEGVYQIERLKEDGWITNIQYEDEVLSMLSERLGLPKDKKVPMVDYRKYSRVRQWTVGLSGGGDQIAVIRAGGSITRVKSPLSVPSSGIIGEQFIEKIRSVRESKRFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVVASMADVAASGGYYMAMAAGTIVAEDLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRFAELLAAEQRPFSFWSDRMKQNSLPSLHKMRTSNFGTKQPFPDP 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 927719 935774 + XM_039023435.1 Bhi02g00045 26567

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00045 567 Pfam Peptidase family S49 206 355 IPR002142 GO:0006508|GO:0008233
Bhi02g00045 567 Pfam Peptidase family S49 457 536 IPR002142 GO:0006508|GO:0008233
Bhi02g00045 567 PANTHER PROTEASE 4 59 536 - -
Bhi02g00045 567 CDD S49_SppA_67K_type 141 354 - -
Bhi02g00045 567 Gene3D - 384 533 - -
Bhi02g00045 567 SUPERFAMILY ClpP/crotonase 377 504 IPR029045 -
Bhi02g00045 567 MobiDBLite consensus disorder prediction 75 98 - -
Bhi02g00045 567 Gene3D - 138 374 - -
Bhi02g00045 567 CDD S49_Sppa_N_C 388 544 IPR002142 GO:0006508|GO:0008233
Bhi02g00045 567 SUPERFAMILY ClpP/crotonase 129 345 IPR029045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00045 K04773 sppA; protease IV [EC:3.4.21.-] - csv:101211243 926.776
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00045 Bhi-Chr2:927719 Bhi02g00046 Bhi-Chr2:927721 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g408 . . . . . . . . . . . Cma11g00235 . Car11g00212 Sed12g2036 . Cpe04g01437 Bhi02g00045 Tan09g1990 Cmetu02g0800 . Hepe09g0301 . . . . . . . . . . Cone16ag0253 . . . . . . . . . . . . . . . . Cmo11g00238 . . . . . . . . . . . . . . . . . . . . Lsi06g01380 Csa01g00322 Chy02g02419 Cme02g01796
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010220 1 2 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00045 Bhi_Chr02 FPKM 5.849724 6.92153 7.087377 6.043173 5.037532 4.760873 4.739738 9.117774 9.227229 10.464542