Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00056 CTGAGATTTTCCCGCAAAATCCGTTTCCGAGTTGAGGAAATTTCAGTTTTGGCTCTGGAAATGCAAGACATACACTCGATCGCCGGAGGAAGTCGCTTGTTCGGCGGCGCTGGCGGCGGAGACCGTCGTCTACGGCCACATCTCCACCACCATCAAAACCACCAAGCCTTGAAGTGTCCAAGGTGTGATTCTCTCAATACCAAGTTTTGTTATTATAATAATTATAATCTCTCTCAGCCACGTCACTTCTGCAAGAACTGCCGTCGTTACTGGACGAAAGGCGGGGTCCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAAACCAAACGCTCCTCCTCTTCTAAGTCTAAATCGAACTCAGACGCAGCGGCGACTCCTCCTCCACCTCCTCTCCGTGAACGCAAATCCACTTCTCATTCCAGTAGCGAGAGTTCCAGTTTGACCGCCACCACTACTACCGCTGCCGCAGCGGCGGCAGCGGCAGCGACTGAGGCCGTGTCGGCTCCGTCGTCTAATTCGGCATCGACTTTATTGAACGTACAGGATACGAAATTGTTCCCTGGTCCGGCTACAAATACAAACCCTAATTTTGAAAGTACGGCCGCGGGGATTTCGGACTGCGGAATTTTCTCGGAAATTGGAAGCTTCACGAGCTTGATCACATCGTCTAACGAGACATTGGCGTTTGGATTCGGTAACATGGCGGACGTGACGGCGTTTGCGATGAATAATCATCAGCAGTTTCAAAATCAAGCGGCGAATCAGTGGCCGCCGCCGCAGAGAATGATGAACGTTAGCGATGAACTGAAGATGCAGGAGATCACAGACGGCGGAGGAGGAGGGTATTTGGATCAGACGGCTCAGGTAGATCCGTCAGGGCTTCAGAATAGCAGATCAAACAACATTGGATTTGGGCCGTTGGATTGGCAATCAAACGGTGATCATCAAGTTCTGTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAATGATCAAGACCAGGCTAATCTGTACCTTCCGTAAATCACTCGAGAGATCACAGACAGGACTTTCTTAGCCCCACCACCTCCGTTTTCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTAAATTTTATTTTTAAAATTTTCCTAATTTTAGTATAAAATTAAAGAAATATCTCTCAATGAAAGGAAAAAAAA 1210 48.43 LRFSRKIRFRVEEISVLALEMQDIHSIAGGSRLFGGAGGGDRRLRPHLHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSSSKSKSNSDAAATPPPPPLRERKSTSHSSSESSSLTATTTTAAAAAAAAATEAVSAPSSNSASTLLNVQDTKLFPGPATNTNPNFESTAAGISDCGIFSEIGSFTSLITSSNETLAFGFGNMADVTAFAMNNHQQFQNQAANQWPPPQRMMNVSDELKMQEITDGGGGGYLDQTAQVDPSGLQNSRSNNIGFGPLDWQSNGDHQVLFDLPNAVDQAYWSQNQWNDQDQANLYLP 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1130090 1131299 + XM_039024041.1 Bhi02g00056 26578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00056 347 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 290 IPR045174 GO:0003700|GO:0006355
Bhi02g00056 347 MobiDBLite consensus disorder prediction 278 302 - -
Bhi02g00056 347 MobiDBLite consensus disorder prediction 102 150 - -
Bhi02g00056 347 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
Bhi02g00056 347 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Bhi02g00056 347 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Bhi02g00056 347 PANTHER DOF ZINC FINGER PROTEIN DOF5.4 28 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00056 Bhi-Chr2:1130090 Bhi08g01605 Bhi-Chr8:46086408 6.51E-35 dispersed
Bhi02g00056 Bhi-Chr2:1130090 Bhi08g00621 Bhi-Chr8:20475529 2.45E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
337 PF02701 zf-Dof 6.00E-33 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00056 - - bhj:120071666 638.647