Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00087 TACATCTTTTTGTGGGCGAGGGATGCGAACTATTTCTTTATTCTTACGCTCGGTTGTATTGTGTGTAACTGGGAGGGAAGAGTGGGGATTGGAATAGAATCTCCTTCCGTTAGTCTGTGAAAGGATCAGATAGAGAAGAAGAAGCTTTTTCATTGGCCGCCTCTTGTAGGGTTGAAGCCACCATTTTCCCACGCTTCTCTACTCAGTTTTCCTCCCAAAACCCTAATACTCTTCCCAGTTTCAAGATCCCAATCTTGGGTTTTTTCGTTTTAATCTCAAAACTCCCGAATTTCGTGACGGTAGCCTCAAATTTGAATCTCAACTGATGCGGATGCTTTATTGGTGGCTCGAGCTAAAGAATGTGCCTGTGCCTTTGTGGTTCTTTTAACAACAGTCACCGTTGTACTAGAATACAATTCTAGTTTTATAGGATTTGAGATGTATGGTCAAACAAATTATGCTTCACAGTTCGGCCAGGGTCCTCAGAAACCGTGGCCACCTGCATACCAACAGCGTGCAGGAGCACCTCCTCCTCCGCCTCCTCCTCCTACCTCATATGTTCAACCAGGCCCACCAATCCCATCACATCCTATAACTCAACAAGCACCTGCTCCCCCACCTCAGGCTACGCAACCTCTACATTTATCTCAGCCGGGTTCCCATGCCCCACCACCTCCCTTCGGTCAGGGCCCATCCATTCAAGTGTTACCTGGCGGGATTACAAATATCCGTCAAACATATTTTCACACATTTCCACCAGTCCATGGAAACACACAACTTTCTGTTTTTAACTCAACTGCTCAGCAGAATGTACAACTTTCACACTCAGGAGTTCAGAATATGCATCACATTCTACCTCCGCCGCCGCCACTGCCACCACCACCACCACCTCCACCTCCTCCTGCTCAAGCTCCCAATCTAGATATATTGCGGCCTCTGCAGCCTTCTACTGTAGGACCGCTTCATCCTCCTTCACAAGGACAAACATTGTATGGATCTCGAATTCATCCACCATTGCAACAAGGTGGCTTGCAGGTCTTTCCCTCTATTCCACAACACCCAACAACATCCACTTTTCCTGCTCCCTCATCCAATTTTCTTGGAGAATCTCATCTGCTTCCAATGGCTCCTCCTCCACCACCATCCTCTCCGCCTCCTATTCCACCTTCTCCACCCCCTCCCACCTCACCCTCTTCTTCAATTCCATACCCAGATTCTTCCAGCTTATCGTGTCGGTCTGAATTAGATCCTAGTTCTACCATTCATTATAGTAAAGGCTTGCAGCCCTCTGAAATTGATCAAGGAGATGCACCTACCAGTCATTTAGGGGATAATGAACCCAAGCATGACGAACATAGAAACTTAGAAGTTGGTTGCGGCCTCATGGTTTCTGAAGTGGACAATGAGATATTGTCAGATAAAGATTATGTGGCATCCAAAAATATAGAAATGAAAAAAAAGTCTCCATTGAGATATTTAAGAATTGAGCCACAATCTGAGAATTTGACAGTGTCAGCAGCTTCCATTTCACCTGCAAACTCTGACATGGAGATGGAAGATGACATCACTGTAGCCGATACAGGAGAGGAAACTAGTCACCCGTTTGAAATTCAAAGCTACGAGTGCAAATCAAGAAAAGAAGAGCATGATGCAAAGGATCAGGTACAATTACAAGAACCTGAAGTTTTGAGAAGCTGCAGCCCCGAAAAGGAGAAGGTAGCTGAAGATGCAGGGCCAAAACTTCTGCTCGACCATGAAAAATCTGTCAGCATTGCAGCTTGCCAAGTTCACAGCCCTGTCAGAAGTACTGCTGGAGTTACTGAACTTCCTCCAGGAAACAATTTTGAGAACTCTTTTACCTGCTTGCAAAATGACAAAGGTCTAGCTGGTGAAGTAGCATCTTCTGCAGTCACTATTTCTAGTCAGTCTACTGCACTTATTACAGGTGGCAGCCCATTTAGACTTATACAGGACTATGCTTCCGATGAGAATTCAGAAAGTGACGAGGATTCTCACCATAAAGATGTCCATTTTGTTGCCATCTCACCTTCAACTCCAGCTTATTCAAAAACTTCCGACAAAGACACTGACAATTCGACTATTCTTGGATCAAAAGGTTCTTTGCAGGTTCAGTGGAGTTATGTTCCACCTTGTGAATCCTCAATGCCTGAATCTGGTGCTCAGTTCCTCTCAGAATCACCAAAACAGGTTTTTGATGCTAATGAGGCAAATGTCAGAAAGACAGGGAATGAACAGAGTTACAACAACCAACAGAATCAAATTGGTACAAGCACTGGTTCCAAGTCTTTGGATGCAATCAACGGTCGTAGTGTTGATGTTCCCCAAGATACTGAAAAGTTACAAAAGGAAAATGATGTAGAAAAGGTGAAGTTGGGATCATCTCCTGTAAAAATAGATGAATTTGGGAGATTAGTCAGAGAAGGTGGCAGTGATAGTGATTCTGATGATTCACACTATACAAGGAGACACAAGAATAAAAGATCTAGAAATAGTAGTGAAAGTCGTTCTCCTGTTGATAGGAGGAGGGGACGAAGGAGTCCACGGAGAAGAAGGGAGAGACGAAGCCGTTCTCACAGTTGGTCTCCTCGTAACCAAAGAGGCAGAAGCAGGTCTCCTGTCAGCAGGCGTACAAGCCAGTTTAATAATGAGAATATGCGACGAGATAAGGGTATGATACGAAAATGTTTCGACTTTCAGCGAGGTAGGTGCTATAGAGGAGCATCTTGTCGCTATGTGCACCATGAACCCAACAAGAACGATGGATCAAGAATCCATAGGAGCAAACATCATGATGTTCACCCTACTTCCAAGAATGTAAAAACAAGAGAGGACACTATGAACATGTCTAGGGAAGTATCAGATCTTGGGCATATGGAAGTTGAGAATCAGGAGAGAATCCCGCATAAAGTGTCCCCGAAAGTTGATACTCATGATTGGAAGACAGATAGTCCTACTGGTGATCCAGATTCATTTGGATCTAAATGTCAAAGTTTTAGAGATAGAATGGGCTTAGTTCAAGAAGAATTAATTTATTCAAAACCAGCTGAGGCTGTCCACATTCATGTTAATGAAGATGGTCAAGAAGGAGAGAAGTCTCACGAGCAACATTCAGTTACAGCCTCCTCACAATGCATGAGCAATGCTGATATGGAGAAATTCTCTGGTGATGTTTCCATTAGCATTCTGACTTCTGTAGAGAAGTCAGTGGCTCAGCAATCCAGCATCTTTGTTGCAGAGCTTCGAACTGCCAATGACCTCTCGCACCAGATGGATGCTTCTTTTGCCTCCAATTTACTACCTGATCAACTAACTGCAGTTACCGCCAATAAAGCTCCTGCATGTGAACATTTTACGGATAAAACTTCATCCAATAAGCCACAGTTTGATACCAATTCTGCTATTCAGCTACCTTTGACCTCACAAATTTTATCACTGTCTCCAGTACCGAAACCATTATCTGCTACTGCTCCAGTTTGTGCTACTGATGATGCCCATTCTCTTACAGAGCTGCCTCCTCCGCCTCCTCTCATAATTTCACGTGTCAGTAGTGCTGAGGTCCCAATACCTGCCCCCTATAATTTTGTGTCTCAAAATGTGTCCTTTCCTTCTAAAGCTTCATTACCAGGAGGTTTTCCTCCTCATCAAGATTTGGTATCCATTCAACCATCTCACTATCACAAGACCTCTTTACTGCCGCCGAAACCATCGTATGACTTGTTGACTCCTGTAACTACCAATGCCAGTATGCCAATGCAATTTCATCAGAGTCATTTGTCTCATGGATATGATCTGGGTTCTCAATCTGTTATGAATTCCCAGCCATTGGAGTTGCATTCTCATTCTAAGCTTGGCGAGTCCCCAGTCCAAGAGCCTTATAGAGCTCCTCCAATGCACATGGATGAAATTAGATCAATTGTGCCAGTTGCAAATAATCAACCTACCCGACCTTTTGGATTTCCAAGCTTTCAGAATGAAGAAAACTTTGGACGGACTTCTGTGGAGATGAATTCTTCCAGTTTTTTCCCTCATCGAAACTTTAATGATCATTCTATGCCCATTTCAAATGCAAATAAAATGCAATCTTCTGCTGATAATTTTCCTCCCAGCGAATTTCGAAGTTCATTTTCACAGTTTCATCCTTATTCAAGGTTCCAACAGCCATTGTATACCTCACAACCTGCACATGATAGCATGTTCCGTGACCCAAGCCAGATTGGTAGTATGTCTCGACATTATCCCGATCCTCTAAGCAGGAACCATCCGCCTTTGCTTCCTGATTTTGGGGGTTTGGGAATTACCACTTATCATAATCCTTATGCTTCTACTTTTGAGAAGCCACTTAGCTCCAGCTTCGGATCTAACTTTTTGAACTTTGGAAATGATGCTCCTAGTGGTGATATACGTAGTTCTACTTTCAATGTAAGCAATGTTCGCGTTGATGGGCAAAGTGCTAATTATGTTGGATCTAGGCAGACAACTACTTCTCCAAATTCCACAAAACCTTTGGGGAAACTCTTGTCTGGTACAGGCGGTGATCAGTATGATCCACTCTTTGACAGCATTGAGCCATCATCACCTATAACCAAGAAATCTGATCGTGGTCAAAAGCTGAAAAAGGCTAAAGAATCTTATACGATAACAAGACTTGGTGGTTCCCATAAATTACTAGATGTGGAGGAGAACAACAAGCATAAGGAAGTTGCTGCTGTGACTTCAACTACATCTCTGGAGAATGATGAATTTGGAGAGACAGCAGACGCAGAAGCTGGTGCTGTTGAGAATGACCTTGACGACGAAGCAAACTTATCAGGAGAAATTGAAATTGATCAGGTTAAGTCCTCTGAGAAGAGCAAGAAATCCAAAGGTTCCAGGTCACTGAAGCTTTTCAGGATTGCTATTGCCGATTTTGTCAAGGAAGTTTTAAAACCATCATGGCGACAAGGCAATATGAGCAAGGAAGCTTTTAAGACAATTGTCAAGAAGACTGTTGACAAGGTATCTGGAGCTATGAAGAGTCACCAAATACCCAGGTCTCAAGCAAAGATAAATCGGTACATTGATTCATCACAACGGAAACTGACAAAGCTTGTTATGGGTTATGTTGACAAGTATGTTAAGACATAGAACATGATGAAAGGTGCAATCCCAATGTGGTGGACTATATGAAGGCAACATTATTATGGTTGCTTTTCCCCTTGTTGGGTGGATATCAGGAATTATGCGTTTGTCTTGGACATCTACAGGGGATGGATAGATGATAGATCCATGGTGGTGGTTGAAATGTCGGTCAGAGTTAGTCATGGTCCTGTGGATACTGAAGAAACGATGAAGCTTATAACATGTTGAGCATCGTGACATAAGTTCTTTAACATATGATTCTCATTATATTCCTGAGGTTGCAGCAAAATAACATGTATGTAATTTGTTTTCCTGAAAAACATTTAGTACCTTTTTGTACTTTCTAGATATATGATCGATGCAGTAAATGTTTACAGATGGATGGTGTGGGATTTTCTTTTTTTGAAGTTGTAGTTGTATATAGTTATTCCGAATACTGTAGTTTCTTTGCAAACACATTAGAGAGAGATGTTAATTTTGGTGAGGTAGCTAGAAACTCCTTTCTTCAAGAGATGGATTAATATTATGAACAGTGAATATCTTTTGTATAGATTTTTCTTTCTTCTAA 5707 42.47 MYGQTNYASQFGQGPQKPWPPAYQQRAGAPPPPPPPPTSYVQPGPPIPSHPITQQAPAPPPQATQPLHLSQPGSHAPPPPFGQGPSIQVLPGGITNIRQTYFHTFPPVHGNTQLSVFNSTAQQNVQLSHSGVQNMHHILPPPPPLPPPPPPPPPPAQAPNLDILRPLQPSTVGPLHPPSQGQTLYGSRIHPPLQQGGLQVFPSIPQHPTTSTFPAPSSNFLGESHLLPMAPPPPPSSPPPIPPSPPPPTSPSSSIPYPDSSSLSCRSELDPSSTIHYSKGLQPSEIDQGDAPTSHLGDNEPKHDEHRNLEVGCGLMVSEVDNEILSDKDYVASKNIEMKKKSPLRYLRIEPQSENLTVSAASISPANSDMEMEDDITVADTGEETSHPFEIQSYECKSRKEEHDAKDQVQLQEPEVLRSCSPEKEKVAEDAGPKLLLDHEKSVSIAACQVHSPVRSTAGVTELPPGNNFENSFTCLQNDKGLAGEVASSAVTISSQSTALITGGSPFRLIQDYASDENSESDEDSHHKDVHFVAISPSTPAYSKTSDKDTDNSTILGSKGSLQVQWSYVPPCESSMPESGAQFLSESPKQVFDANEANVRKTGNEQSYNNQQNQIGTSTGSKSLDAINGRSVDVPQDTEKLQKENDVEKVKLGSSPVKIDEFGRLVREGGSDSDSDDSHYTRRHKNKRSRNSSESRSPVDRRRGRRSPRRRRERRSRSHSWSPRNQRGRSRSPVSRRTSQFNNENMRRDKGMIRKCFDFQRGRCYRGASCRYVHHEPNKNDGSRIHRSKHHDVHPTSKNVKTREDTMNMSREVSDLGHMEVENQERIPHKVSPKVDTHDWKTDSPTGDPDSFGSKCQSFRDRMGLVQEELIYSKPAEAVHIHVNEDGQEGEKSHEQHSVTASSQCMSNADMEKFSGDVSISILTSVEKSVAQQSSIFVAELRTANDLSHQMDASFASNLLPDQLTAVTANKAPACEHFTDKTSSNKPQFDTNSAIQLPLTSQILSLSPVPKPLSATAPVCATDDAHSLTELPPPPPLIISRVSSAEVPIPAPYNFVSQNVSFPSKASLPGGFPPHQDLVSIQPSHYHKTSLLPPKPSYDLLTPVTTNASMPMQFHQSHLSHGYDLGSQSVMNSQPLELHSHSKLGESPVQEPYRAPPMHMDEIRSIVPVANNQPTRPFGFPSFQNEENFGRTSVEMNSSSFFPHRNFNDHSMPISNANKMQSSADNFPPSEFRSSFSQFHPYSRFQQPLYTSQPAHDSMFRDPSQIGSMSRHYPDPLSRNHPPLLPDFGGLGITTYHNPYASTFEKPLSSSFGSNFLNFGNDAPSGDIRSSTFNVSNVRVDGQSANYVGSRQTTTSPNSTKPLGKLLSGTGGDQYDPLFDSIEPSSPITKKSDRGQKLKKAKESYTITRLGGSHKLLDVEENNKHKEVAAVTSTTSLENDEFGETADAEAGAVENDLDDEANLSGEIEIDQVKSSEKSKKSKGSRSLKLFRIAIADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMKSHQIPRSQAKINRYIDSSQRKLTKLVMGYVDKYVKT 1568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1644417 1655453 + XM_039023578.1 Bhi02g00087 26609

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 661 747 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 834 856 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 227 254 - -
Bhi02g00087 1568 ProSiteProfiles Zinc finger C3H1-type profile. 755 777 IPR000571 GO:0046872
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 174 189 - -
Bhi02g00087 1568 PANTHER EXPRESSED PROTEIN 1 1568 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 24 85 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 702 724 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 397 425 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 136 308 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 601 649 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 779 803 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 255 281 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 397 411 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 725 741 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 137 160 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 661 682 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 1380 1402 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 1 91 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 601 626 - -
Bhi02g00087 1568 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1568 - -
Bhi02g00087 1568 MobiDBLite consensus disorder prediction 199 219 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00087 - - - csv:101219633 2276.52
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00087 Bhi-Chr2:1644417 Bhi03g01359 Bhi-Chr3:28331954 8.71E-24 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g457 Blo04g00798 . . . . . . . . . . Cma11g00215 Car10g00275 Car11g00194 Sed12g2017 . Cpe04g01453 Bhi02g00087 Tan09g2029 Cmetu02g1493 . Hepe09g0282 . . . . . . . . . Cone2ag0794 Cone16ag0215 . . . . . . . . . Bda14g00888 . Bpe15g00571 . . . Cmo10g00311 Cmo11g00217 . . . . . . . . . . . . . . . . . . . . . Csa01g00305 Chy02g02433 Cme02g01821
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009616 1 1 0 0 1 1 2 1 1 1 1 1 2 2 1 2 1 0 2 1 1 1 1 1 1 1 1 1 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00087 Bhi_Chr02 FPKM 4.851064 2.821731 1.441906 1.913217 0.968518 0.515776 1.252092 0.921815 0.858212 1.193198