Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00117 TATTCATTTGATGGCTGTTTTCAAAGAAGGTGGGACCTCATTTAAAAACTCAATAGCGTAATCCTTTGACTCCAGCTCATAGTCAAAGAAGCCATTTCCTACGTCAGAAAAGTAAAAATTAGACAAAAAATTAATAATATCATCCAAAAGCAACAGACTATAAAAGGCAAGAGATTTGCACCAAAGGATATATCAAAGATCACCAACAATGGCAGAGGTAAAGATTATAGGGTCAGCTTCAAGCCTCTTCTGCATAAGGGTTGAATGGGCCTTGAAGCTTAAAGGAATCGAGTATGAGTACATACCTGAAGACTTGAGAAACAAAAGTGAGCTGCTTCTCAAGTCCAATCCTGTGCTCAAGAAAATACCTGTGCTTTTGCACAATGGCAATGCCATCTCCGAGTCGCTTCTCATTATCGAATACATCGATGAGACCTGGAAGGAGAACCCGATATTGCCTGAAGATCCGTATGACAGAGCCAATGCTCGCTTCTGGGCTAAGTTTTTAGATGAGAAGGGCTTGTTGGGTGCCTGGGAAGCTTGCCAGGCTGAAGGAGAAGAGAAGGAGAAGGCTGTAGAGGCTGCAGTACAAAATTTGGCACTGATTAATAAAGAAATACAAGGAAAGAAATTCTTTGGTGGGGAGCAAATCGGTTACCTAGATTTAGCTGCAGGTTGGATTTGCCACTGGCTCAATGTTCTGGATGAAGTGGGAGAAATGAATGTGTTTGACAAAGAGAGGGTCCCATCCCTTCATGAATGGGCTCAAAACTTCATCCACATTCCAGTTATCAAAGAATCCCTTCCACCCAGAGAAATTCTTGTCAACTACTTCAAGGGGAGTCTGAGCTACGTCCGGTCCTTAGCTGCAAAAAAGTAATAAGATGTCTCATCCAATGTCCATATTTCATTACAAATGAGTTTATTCTCACAATAAGAATACAGCTAGTCAACGTGAAACAAATTCATAGGTTAAAAAATCATAGGTGTTTGCGTTTGAATACTCTTTTATTACCATGGAGTGATATGTATCTATTTCATTGAGTGTTCCGTTAAATGATATAATTAAATTTACTTTCACCCATCAA 1088 39.8 MAEVKIIGSASSLFCIRVEWALKLKGIEYEYIPEDLRNKSELLLKSNPVLKKIPVLLHNGNAISESLLIIEYIDETWKENPILPEDPYDRANARFWAKFLDEKGLLGAWEACQAEGEEKEKAVEAAVQNLALINKEIQGKKFFGGEQIGYLDLAAGWICHWLNVLDEVGEMNVFDKERVPSLHEWAQNFIHIPVIKESLPPREILVNYFKGSLSYVRSLAAKK 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2122602 2124290 + XM_039023882.1 Bhi02g00117 26639

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00117 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Bhi02g00117 223 CDD GST_N_Tau 4 77 - -
Bhi02g00117 223 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Bhi02g00117 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Bhi02g00117 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Bhi02g00117 223 Gene3D - 83 218 - -
Bhi02g00117 223 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Bhi02g00117 223 Pfam Glutathione S-transferase, C-terminal domain 118 187 - -
Bhi02g00117 223 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Bhi02g00117 223 Gene3D Glutaredoxin 1 82 - -
Bhi02g00117 223 SFLD Glutathione Transferase (cytosolic) 1 215 IPR040079 -
Bhi02g00117 223 PANTHER GLUTATHIONE S-TRANSFERASE 1 220 - -
Bhi02g00117 223 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Bhi02g00117 223 Pfam Glutathione S-transferase, N-terminal domain 13 75 IPR004045 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00117 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - csv:101217418 419.083
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00088 Bhi-Chr1:1630727 Bhi02g00117 Bhi-Chr2:2122602 1.49E-70 dispersed
Bhi02g00117 Bhi-Chr2:2122602 Bhi03g02065 Bhi-Chr3:44661670 3.48E-62 dispersed
Bhi03g02075 Bhi-Chr3:44968062 Bhi02g00117 Bhi-Chr2:2122602 1.66E-59 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g252 . . . . . . . . . . . Cma11g00299 . . Sed08g0385 . . Bhi02g00117 Tan09g1846 Cmetu02g0734 . Hepe09g0371 . . Cla06g01435 Cam06g1590 Cec06g1650 Cco06g1642 Clacu06g1551 Cmu06g1506 Cre06g2315 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi06g01302 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013759 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 0 1 1 1 1 1 1 1 3 25
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00117 Bhi_Chr02 FPKM 16.594877 17.455975 17.163147 17.643618 31.058098 27.209316 33.686485 26.308056 27.930052 28.513956