Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00135 CCCAAAACCATTCCATTCTTTCTAATAAACTCCCAACAAAAACATTATAAATATTGTCTTTTTTTTTTTTTATTATTATTATTACTATTATTGAACCAAAGGCTAAAAAAGTTTCCAACTTTCTTCCTCTTTGAGAATGTGGACTTTGGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCTGAGGCCTTTCATGGCGGTCGCAAGCTCCGGCCTCTTGTCCCTCGCCCTTTGCCTTCCCTTCGTGTCAATGGCGCTAACTTGTCTTCCCAATATTACCATCTCGCAAATCTTTTGAATGAGGAAAGCCAGAGAGAGTTGTTGAATAATGAAAAGAGTTCATCAAGTCCAACACCAGTAACAGTGAGTTCATCAAGATGGAATCCGACGGCGGAGCAGTTGAGAATTCTGGAGGAGCTTTACCGGCGAGGGACAAGAACGCCGTCCGCCGACCAAATCCAACACATCACCGCCCAGCTCCGCCGCTACGGCAAAATAGAAGGCAAAAACGTTTTCTATTGGTTTCAAAATCACAAGGCTAGAGAGCGCCAAAAACGACGCCGTCAAACTGCCGCTGAACAAACCAAATATTCTGAGGCAGAAAAAGGGTACGAAATTGAAGAGACAAAGACGAAGTGTAGGTGGGGAAGGCCACCACCACCACCACCCTCTATAATCTCCTCTACTCTATTTTCACAGGAATGTGCAGAAACACAGAGAAAAACAAAAGTTGTTGAATTGGAACAACAAGAAGAAGAAGAAGAACAGGAAACAAGAAGAGAGTCAGTGGAAAGAGATGGAACATGGAAATACAATAATATATTGAATTGTCAACTCATAAACCCTACAAGGAAGACCCAACATCTAAACAGTGTCGACGAATCCCGCACCGGAGACCAACGACACAATGTCGTTGATAACGATGGCGAAGAAGAATCTAAAACGATGACACTTCAGTTGTTTCCTCTATGCAGCACCAAGTTTTACAAATACGACGGCGAGAGAGAAGGACGACGGGATGATTGGCCAGCGATCATGTCGGATTCAGACAATGTGATCAAAAGCACCACCTTATCTCCAAGTTGTAGTTTCCAGTTTTTTGAGTTTCTTCCACTCAAAAACTGATTTCATTTTCACCATGTTATGTCAATGTTAAGACTTATTTTTGTTACCATATAGGAATAGAAGAGATCAGAGAGTGTTCTAATGTGTGTGTGTTTTTTTTCCACAAAAGGTTTTAAATATAATTCCGATAAAAATGTGAAAACTAAGATAAAAT 1280 40.94 MWTLGYDDNGGEFCFSEAFHGGRKLRPLVPRPLPSLRVNGANLSSQYYHLANLLNEESQRELLNNEKSSSSPTPVTVSSSRWNPTAEQLRILEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQTAAEQTKYSEAEKGYEIEETKTKCRWGRPPPPPPSIISSTLFSQECAETQRKTKVVELEQQEEEEEQETRRESVERDGTWKYNNILNCQLINPTRKTQHLNSVDESRTGDQRHNVVDNDGEEESKTMTLQLFPLCSTKFYKYDGEREGRRDDWPAIMSDSDNVIKSTTLSPSCSFQFFEFLPLKN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2560364 2565179 + XM_039022836.1 Bhi02g00135 26657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00135 329 ProSiteProfiles 'Homeobox' domain profile. 75 140 IPR001356 GO:0003677
Bhi02g00135 329 MobiDBLite consensus disorder prediction 244 267 - -
Bhi02g00135 329 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 51 329 - -
Bhi02g00135 329 SUPERFAMILY Homeodomain-like 71 144 IPR009057 -
Bhi02g00135 329 SMART HOX_1 77 144 IPR001356 GO:0003677
Bhi02g00135 329 Coils Coil 190 219 - -
Bhi02g00135 329 CDD homeodomain 81 141 IPR001356 GO:0003677
Bhi02g00135 329 Pfam Homeodomain 79 139 IPR001356 GO:0003677
Bhi02g00135 329 MobiDBLite consensus disorder prediction 61 82 - -
Bhi02g00135 329 Gene3D - 75 140 - -
Bhi02g00135 329 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 51 329 IPR044555 GO:0003700|GO:0099402
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00135 Bhi08g01290 CCT
Bhi02g00135 Bhi08g01290 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00135 Bhi-Chr2:2560364 Bhi03g00873 Bhi-Chr3:16214180 1.78E-27 dispersed
Bhi11g00266 Bhi-Chr11:6084763 Bhi02g00135 Bhi-Chr2:2560364 7.80E-15 dispersed
Bhi04g00375 Bhi-Chr4:9164651 Bhi02g00135 Bhi-Chr2:2560364 4.16E-29 transposed
Bhi04g02335 Bhi-Chr4:64012077 Bhi02g00135 Bhi-Chr2:2560364 4.33E-29 transposed
Bhi02g00135 Bhi-Chr2:2560364 Bhi08g01290 Bhi-Chr8:39357629 1.45E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
341 PF00046 Homeodomain 2.20E-19 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00135 - - csv:105434593 439.499