Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00212 ATCATCGGGAAAAAGAAAAGTGGGGAGGAGGAGTGTTATAGTGAAAATTGTTTGGCTTTGGCAAACTGAACCAACAGGGGCGGGGACCGATCCAATGGTCTGCTCTGTTGCACGCAGGACCCCAACATCAGTCACGTGCTAGACATGGGCGCCCTTCCCAATTCCTTCTCCCTCTTCTCTCTGATTTTCCTCTTCACTGCCGTCTCTCCGGCAGCTGCCACCGCCGGCGGCCCACCTCTAAACCTTATCCTACCCCACCCTTTTCTGTATCGCTTCAAGTCCTTAAAGGAAACTCTTTTTGTTGCTTCTCCTTCTCCGCCGCCACCGCCGTCCTTTCCCTCTGCTCCTCCTCCCGAGGAGAAGCCGGTCTATTCTCCATTCCGGCCGAGCATGGCGGTGGTGGTGGGTGTTCTGACCACCACTTTCTCCATCACCTTCCTTCTCCTTTTATATGCCAAGCACTGCAAGCGTGGGAATGCGGTGGTGATCGGTTACTCGATGCGTCCCAATACGATGATGGGTGTTCCGAGCTTCTCTACCAGGAAAAACTCCGGCATCGACCAGGCCGTGATCGAATCGTTGCCGATTTTCCGATTTGGATCGTTGAGTGGACAGAAGGAAGGCTTGGAATGCGCCGTTTGTCTGAACAGATTCGAGCCGGCGGAGGTTCTGAGACTTCTCCCGAAATGCAAACACGCCTTCCATGTCGAATGCGTCGATACTTGGCTCGACGCTCACTCAACTTGCCCTCTCTGTCGCTACAGAGTCGACCCAGAGGACGTCTTATTAGTCGAAGACGTCAATATATTTCTCCACAACCCACCACCTCTGCCGCCGCGGGAATCGAATTCCAAGGATGTAGTGTTGAACTTAGAACAGGGGAGAAGAAGCAGCAAGGCTGGATCCGGTAGAGTCTCCGGCAGACACTCGTCAGTCGGCGAGAAGAGAACAGGGGAGTCCAGTTACCGTGATCCAGCATTGTTGAGACGGTCACTCGACAGCAAGAGAACCGAAACGGTAGCTGTCGGATGCTTCGATCGGCACCGGAAGGACGGGCTACTATTGCCGGAGGAGAAAACAAATCAAAATCAGAATCAGAATAGATTGGAGCACAGGATCATAGTGTCGCCGAGGGTGCCGGTGATGGTACAGGGGCAACAGACATGGAGCGATGTACAAGCTTCGGATCTGTTGTATCTACGGTCAGAAATGATAATATCTGACAGCCGTAGATTTTCGGTAGCTTCATTACCACCGGAATTAAAGAGACAGCGACGGATGGGGATGATGGGGAAGCATGCCGGAAAAGGGGCCGGGATGATGATGATGGCAGATGTGTAATAAATAACGGTGTCAGATTCAGAAATCACGGATGAACGGACCCAACCCAGAGCTCCCACCAGCTTCTTCTAGAACAGAGCAACCAAAAAGAAAAAAACAGAGAGGCATTAAAATTTTCTGAACCAACCAACCACTGTAATGGTGATTGAGGGGTGAAAATTACAGGTGAAGGGCGGTGGCGGCTGCGGCTGCGGCGGAGGAGAGGGGATGGAACAAAAGGGAGAACGGTGGAGGGGGGGAGGAGAAAGTGGATCTTGAAAGGGAAATGGAGAGCAAAGGGAAATTAATTGGGATCAGGATGAGAAGAAAGGGAATTTTGATTATATATGTTAAAAAGTAGAAAATATTTTTGTAGGGAAAATAGTGTAGGAAGGGGAAGGAATAACGAACCTAAGCTTTCTTTTTGGTTACATAACATCTTGTCCTAACTCTCCAGCTTTTGCTCTATGATGTGCTCTCTCTCA 1805 50.53 MGALPNSFSLFSLIFLFTAVSPAAATAGGPPLNLILPHPFLYRFKSLKETLFVASPSPPPPPSFPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAVVIGYSMRPNTMMGVPSFSTRKNSGIDQAVIESLPIFRFGSLSGQKEGLECAVCLNRFEPAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHNPPPLPPRESNSKDVVLNLEQGRRSSKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVAVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPRVPVMVQGQQTWSDVQASDLLYLRSEMIISDSRRFSVASLPPELKRQRRMGMMGKHAGKGAGMMMMADV 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4172859 4174998 + XM_039023136.1 Bhi02g00212 26734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00212 398 MobiDBLite consensus disorder prediction 261 277 - -
Bhi02g00212 398 PANTHER RING-H2 FINGER PROTEIN ATL43 54 378 - -
Bhi02g00212 398 SUPERFAMILY RING/U-box 143 210 - -
Bhi02g00212 398 SMART ring_2 163 204 IPR001841 -
Bhi02g00212 398 MobiDBLite consensus disorder prediction 245 277 - -
Bhi02g00212 398 ProSiteProfiles Zinc finger RING-type profile. 163 205 IPR001841 -
Bhi02g00212 398 Pfam Ring finger domain 162 205 IPR001841 -
Bhi02g00212 398 CDD RING-H2_EL5_like 162 205 - -
Bhi02g00212 398 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 54 378 - -
Bhi02g00212 398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 212 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00212 Bhi-Chr2:4172859 Bhi02g01189 Bhi-Chr2:27947317 3.80E-53 dispersed
Bhi09g02473 Bhi-Chr9:67074507 Bhi02g00212 Bhi-Chr2:4172859 4.99E-25 dispersed
Bhi12g01880 Bhi-Chr12:60269192 Bhi02g00212 Bhi-Chr2:4172859 4.62E-14 dispersed
Bhi02g00212 Bhi-Chr2:4172859 Bhi04g00792 Bhi-Chr4:19726080 6.20E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00212 K19041 - csv:101203916 608.601