Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00217 CCTTTACTCTTTCAAAAATTTTTATATTCTCATTCTTAAAATTTATTTCTTTTTTAAAAAATTCATTAATTACTTCTTTTTTAACTCACAAAACTCAATAATTAACTGATTATTTCAACTTGAAACTTCTCTCTCTTTCTTTACCAATTCATTCTCTTAATATCCCCCACTTACCCTTTCTCTTCTTCTCCAAGACTGCCATGGGAGATCATCAAGATGAGGTTTGTAATATCAGTTGGCTTAGCCTTGGTTTGGGATTTGGTGATGATCAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAATCAACTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATCAACAACAACAACAACAGCAACATCAATATGGAAATTGATGATGAAGAAGCTAACTCAAGTGAAGAAGATCATCATCATCATTTGATGAAGAGAAGTAGAAGCAATAATAATATTGTTAATTATGATCATCAAGATTCCTCCTTTGGAATTAGATCAAGATCATCATCAGATCATCATCATCATCAGTCCAGCAACAACAATATTATTACTACTAATCATAATCACAAGGGGATTAGTAGTAGTGGTGCATCAGAATTAAGGGAGAGAAAGAAGCTTAGGCTTTCTAAAGAACAATCCACTTTGCTTGAAGAAAGCTTCAAACTTAATACCACCTTGAATCCGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTCTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAATCGAAGGTTGAAGAAAGAATTGCATGAATTAAAATCCCTTAAACTTGGAGCTTCACAATTGTATATTCAACTACCCAAGGCCGCCACCCTCACAATTTGCCCTTCATGCGACAAAATTACCCGGACGGCCGCCGCCAACGCCGCCGCCCTCGACGCCAATTCTCCCCCACAATAATTTAATAATGCCCTTTTCTTTTTCTTTTTCTTTTTTTAGGCTGTGTTTTTAGTACAGCAAAAAAGAATAATTCAATTCAATAACAATATACAGCCTTTTCTCTTTTACATTTTATATGAAATCATCTAAACTATGTTAAGAACAAAAAAAAAAGAAAAAAGTTTAGTTTTTTTTC 1194 33.92 MGDHQDEVCNISWLSLGLGFGDDQYVPKKMQKINNNQLSFTLIPKEELGINNNNNSNINMEIDDEEANSSEEDHHHHLMKRSRSNNNIVNYDHQDSSFGIRSRSSSDHHHHQSSNNNIITTNHNHKGISSSGASELRERKKLRLSKEQSTLLEESFKLNTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELKSLKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAALDANSPPQ 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4244021 4245909 - XM_039024067.1 Bhi02g00217 26739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00217 272 MobiDBLite consensus disorder prediction 83 101 - -
Bhi02g00217 272 MobiDBLite consensus disorder prediction 111 131 - -
Bhi02g00217 272 Pfam Homeobox associated leucine zipper 195 228 IPR003106 GO:0006355|GO:0043565
Bhi02g00217 272 Gene3D - 130 200 - -
Bhi02g00217 272 SUPERFAMILY Homeodomain-like 125 196 IPR009057 -
Bhi02g00217 272 ProSitePatterns 'Homeobox' domain signature. 170 193 IPR017970 GO:0000981|GO:0006355
Bhi02g00217 272 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 10 259 - -
Bhi02g00217 272 SMART HOX_1 137 199 IPR001356 GO:0003677
Bhi02g00217 272 MobiDBLite consensus disorder prediction 65 142 - -
Bhi02g00217 272 Pfam Homeodomain 139 193 IPR001356 GO:0003677
Bhi02g00217 272 PANTHER - 10 259 - -
Bhi02g00217 272 Coils Coil 194 228 - -
Bhi02g00217 272 ProSiteProfiles 'Homeobox' domain profile. 135 195 IPR001356 GO:0003677
Bhi02g00217 272 SMART halz 195 238 IPR003106 GO:0006355|GO:0043565
Bhi02g00217 272 CDD homeodomain 139 196 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00217 Bhi-Chr2:4244021 Bhi11g00845 Bhi-Chr11:24361169 1.02E-57 dispersed
Bhi02g00217 Bhi-Chr2:4244021 Bhi03g01084 Bhi-Chr3:22004589 1.20E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
342 PF00046 Homeodomain 6.10E-16 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00217 K09338 - csv:101203427 365.925