Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00232 TTTCCCCTTCTTCTTCCCTAACCTCTCTCTAAATCACTTATCTCTCACTTTCCGATCATATTATACAAATCCATGGCGGTGGATCTCGCAGCTTTTCCAGCCAAGATCGATGATCAAACCGCCATCGAAGAAGCTGCCTCCGCCGGTTTACAGAGCATGGAGCATCTAATCCGTCTCTTATCCAAACAACAGCACTCTGAAACTCCTAACAACAATCTCAATTGCTCTGGACTCACCGATTTCACCGTCTCCAAATTCAAACGGTTGATTTCCCTCTTGAACCGAACCGGCCACGCTAGGTTCCGCCGTGGACCTTCGGATTCCCCCAATCCCGTCCTCAATTCCCTTGATCAACCTCTCAAAACCCATTTCCCTAAAGCCAATTTCTCCCCTGTTTCCAAATTCCCTGATTCTAGAGATTCCACAACCACCTCTTCTTTTGTTTCCACGATCACCGGCGACGGCAGCGTTTCTAACGGAAAGGTTGATCTCTCGGTCTTTGCAACGCCGCCGGTAAACTGCGGGAAACCGCCGTTGGCGGTGAAGAGGAAATGCGATGATGGGTCTGGATTTGGTTGTAAGGTTCCTTCGAAGCTCTGTCACTGTGCGAAGCGAAGGAAATCTGGAGTAAAGAAGACGGTACGAGTTCCGGCGATCAGTTCTAAGATCGCTGATATACCTTCCGATGAATACTCTTGGAGAAAGTACGGTCAAAAACCCATCAAAGGCTCACCCTATCCTAGAGGGTATTATAGATGCAGCACCGTCAAAGGATGTCCGGCGAGGAAAAAGGTGGAAAGAGCTCGTGACGATCCGACGATGCTCCTCGTAACTTACGACGGAGATCACCGTCACCCGCACCCTACGGTCACCGATGCCAGTGTGGGTGTCGTTTCCCAAAAGAGTTGAAAAAGAGAAGCGTGTCGGAGAATAACGCTTTCCGATTCGGCTGTCATGCTGTTTCCTGAAGATACCTGTGACTCTTGAGTTTTTTCTGAAACCAATCTTAAAAAAGTCAAAACAATGTTGTAAAGTCAAAACTAGCATCGGAATTCACGAAGCGATCACCTTGGTCCAAGTCAAACCAAAATACAAAATCACGTTCGGATCTTTAGTAATGGAACCGGGACGGAACAATGAGGTGGAAGGGTATCGATGTAATTTTGTTATTGTATTATATTTTCTTAACATGATAATTTGGCCAACAATATGGTCCCACATGGTTGGACTTTTTTTTTTTTAAAAAAATTTATTTAATAAAACAAAATATACTATTTCTACA 1282 45.24 MAVDLAAFPAKIDDQTAIEEAASAGLQSMEHLIRLLSKQQHSETPNNNLNCSGLTDFTVSKFKRLISLLNRTGHARFRRGPSDSPNPVLNSLDQPLKTHFPKANFSPVSKFPDSRDSTTTSSFVSTITGDGSVSNGKVDLSVFATPPVNCGKPPLAVKRKCDDGSGFGCKVPSKLCHCAKRRKSGVKKTVRVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYRCSTVKGCPARKKVERARDDPTMLLVTYDGDHRHPHPTVTDASVGVVSQKS 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4491930 4494006 + XM_039022504.1 Bhi02g00232 26754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00232 278 SUPERFAMILY WRKY DNA-binding domain 201 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00232 278 Gene3D WRKY domain 192 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00232 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 117 270 IPR044810 GO:0003700
Bhi02g00232 278 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 93 IPR044810 GO:0003700
Bhi02g00232 278 Pfam Plant zinc cluster domain 158 201 IPR018872 -
Bhi02g00232 278 Pfam WRKY DNA -binding domain 205 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00232 278 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00232 278 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 93 - -
Bhi02g00232 278 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 117 270 - -
Bhi02g00232 278 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00232 Bhi-Chr2:4491930 Bhi10g01508 Bhi-Chr10:36847760 4.79E-65 dispersed
Bhi02g00232 Bhi-Chr2:4491930 Bhi03g00957 Bhi-Chr3:18202420 3.30E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
343 PF03106 WRKY 1.20E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00232 - - bhj:120070667 559.681