Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00286 ATGGCAGAAGAAATAGAAGCCATGGAACGAACTAATACATGGACTATTGTCTCTCTTCCAAAGAATCATCATACCATAGGCAGTAAATGGGTTTACAAAGTCAAGTACAAACAAGATGGAACAGTTGACAAATATAAGGCAAGACTTGTAGCAAAAAGCTACAATCAACAAGAAGAAATAGATTTCTCAGACACCTTCTCACCTATCGCCAAAATTGTCACTGTTAAAGTCTTCTTCGCCCTTGCTACATCCTACAATTGGTCACTCACTCAAATGGACATCAATAATGCCTTCCTAAATGGTGATTTGTTTGAAGAAGTGCATATGTCTTTGCCATTGGGTTATCAAACCTCACAAGTACCATGGAAAGGTGAGAAACTAGCCTGCAAACTTAACAAATCTATATATGGGCTGAAACAAGCCTCGAGACAATGGTCTCTCAAGTTTACAGCTGCTCTATCTTCACATGGCTTTCATCAATCCAAGTCTGATTATTCTCTTTTTACCCAAGGACATGGACATGATTTTGTAGCATTATTGGTATATGTAGATGACATATTACTAACTGGACCATCCCCTCAAATAATCAGCTCAGTCAAAGAAGTCCTCAAAGGACATTTCAAACTCAAGGATTTAGGCCATGCGAAAGATTTTCTGGGATTAAAATTATCCAGATCTCAACAAGGGATCATGATTTCCCAAAGAAAATATTGCCTCCAAATACTTGAGGATACTGGATTTCTTGAAGCTAAACCAGCTACAACTCCTATGGATCCCAATTTGAAACTATCAAAGAATGAAGGAGAGCTTCTAAAGGCAGATGACATCACATGTTATAGGAGACTGATTGGCAGGCTTATATATCTTCAAATATCTCGGCCAGACATATGCTTTGTTGTTCATCGGCTAAGCCAATTCATCCACAGCCCCACTAAAGCTCACTTAAATGCCGCTCATCACTTACTCAGGTACCTAAAACGGTATCCTGGACAAGGCATTTTAATCAGCCCTATCACTTCCTTTCATTTAAAAGCCTTTGTGGATGCTGATTGGGGATCATGTCCTGTTACTAGAAGATCCATTACTGGTTTCTGCATATTCCTAGGGGCATCTATCATATCATGGAAATCAAAGAAACAAGTCACCGTTTCTAGATCTTCTGCAGAAGCGGAGTACAGGGCACTAGCCTCAGTTACTAGTGAATTCATATGGATCTCTCAACTCCTCAAAGATCTTCAGGTTAAGATCCTAATGCCCACTACTGTATTCTGGACAATCAAGCTGCTATTGCCATTGCCTCTAATCCAATGTTTCATGAGAGGACAAAACACATAG 1335 39.55 MAEEIEAMERTNTWTIVSLPKNHHTIGSKWVYKVKYKQDGTVDKYKARLVAKSYNQQEEIDFSDTFSPIAKIVTVKVFFALATSYNWSLTQMDINNAFLNGDLFEEVHMSLPLGYQTSQVPWKGEKLACKLNKSIYGLKQASRQWSLKFTAALSSHGFHQSKSDYSLFTQGHGHDFVALLVYVDDILLTGPSPQIISSVKEVLKGHFKLKDLGHAKDFLGLKLSRSQQGIMISQRKYCLQILEDTGFLEAKPATTPMDPNLKLSKNEGELLKADDITCYRRLIGRLIYLQISRPDICFVVHRLSQFIHSPTKAHLNAAHHLLRYLKRYPGQGILISPITSFHLKAFVDADWGSCPVTRRSITGFCIFLGASIISWKSKKQVTVSRSSAEAEYRALASVTSEFIWISQLLKDLQVKILMPTTVFWTIKLLLPLPLIQCFMRGQNT 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5410697 5412031 + XM_039023345.1 Bhi02g00286 26808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00286 444 SUPERFAMILY DNA/RNA polymerases 12 425 IPR043502 -
Bhi02g00286 444 PANTHER GAG-POL-RELATED RETROTRANSPOSON 35 239 - -
Bhi02g00286 444 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 12 257 IPR013103 -
Bhi02g00286 444 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE 35 239 - -
Bhi02g00286 444 CDD RNase_HI_RT_Ty1 344 423 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00286 Bhi-Chr2:5410697 Bhi09g01081 Bhi-Chr9:25140463 0 dispersed
Bhi03g02176 Bhi-Chr3:47300612 Bhi02g00286 Bhi-Chr2:5410697 3.92E-49 dispersed
Bhi08g00874 Bhi-Chr8:29047234 Bhi02g00286 Bhi-Chr2:5410697 5.86E-22 dispersed
Bhi09g01884 Bhi-Chr9:52204620 Bhi02g00286 Bhi-Chr2:5410697 7.56E-57 dispersed
Bhi10g01299 Bhi-Chr10:30718172 Bhi02g00286 Bhi-Chr2:5410697 3.03E-39 dispersed
Bhi12g01425 Bhi-Chr12:45732433 Bhi02g00286 Bhi-Chr2:5410697 6.02E-16 dispersed
Bhi12g02625 Bhi-Chr12:81088044 Bhi02g00286 Bhi-Chr2:5410697 4.06E-27 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00286 - K12447 bhj:120071216 895.575