Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00307 CCTCCCCTCACCAACTCACCCTTTTTCGCTCTTTTCTCTCTTGGGCATTTTCACAAACACCTTGTACGCTCTCTCAACTGGTCTGTTCATCTCTCTAATTCCCACCATTTTCAAGCGTGTTTTAGCTTTGCTTTCCTGAGATTTACTCTTTGCTGTGAAGTTAAAATGGTGTTTATTGGATTTCTCTTGGTGGGTCTTCTTCTATCTTTGGGATGTGATTCTGCTCTTGGCAACAAAAATGGAGGAGGTTGGATTAATGCCCACGCCACATTCTACGGTGGGGGCGACGCCGCGGGTACAATGGGAGGGGCTTGTGGCTACGGAAATCTGTACAGCCAGGGATATGGGACGAACACAGCAGCTCTGAGTACAGCCTTATTCAACAATGGACTGAGCTGTGGCGCTTGCTTTGAAATCAAATGTGTAAATGATGCAAAATGGTGCCTTCCAAAGTCCATCGTGGTCACTGCTACAAACTTTTGTCCACCAAACAATGCGCTCCCCAACAACGCCGGCGGCTGGTGCAATCCTCCCCAACACCACTTCGATCTCTCCCAACCCGTCTTCCAGCAAATCGCTCATTACAAAGCCGGCATTGTCCCAGTGACATACAGAAGGGTGTCTTGTGAGAAGAAAGGAGGGATTAGATTCACAATCAACGGTCATTCGTACTTCAATTTAGTTCTTGTAACCAACGTTGGGGGAGGTGGCGATGTTCATGGCGTGTGGATTAAAGGGTCGAAAACAGGGTGGGAAGCAATGTCGAGGAACTGGGGACAGAATTGGCAGAGCAATTCATATTTGAATGGACAAAGCTTGTCGTTCAAAGTGACCACCGGCGATGGCCGGACGGTGATATCGAACGATGTAGCGCCAGCTGGGTGGAGCTTTGGTCAGACTTTTAGTGGGGCGCAGTTCCGATGAACAGAGACAACAACAAAACAGAACAGAACAGAACGAAACAGAGTTTTTTCTTGGTCACTTTCTAGGAAGTTGTGTTAGTGTTAGAGTGGGCACTGCTTTTAATGTGTCCTCTTTTTCCTTTTAATTTTTTAGTATTTTTAGTTTGTGAGTTTGAAATGTGGGGCTTGGTTTGGTTTGGTTTTGGGGTTCTGCTGTGTGTGTTTTAAAGGCAATGGCAGAGTGAAAGATACTGGCAGCGGTAGGCATTTGATATGACACCCGCCACTTTGTTTCTTTGGGTTAGAGCTTAGGACTTGGGACTTTCTGTTAATGTTAATGTTAATTTGTGGGGTTTATAATATAAAGTTTAGTATTAGGCTGTTTTTTTTTTTTTTTTTTTAGGTGTCAAAACTCAAAAGGCTGTATTGAGTATTGAGAGAAGTCTTGTAACTCCAGCTCTTTTGATAGCTATTCTACTTTTGTTGGGTCTAA 1395 44.52 MVFIGFLLVGLLLSLGCDSALGNKNGGGWINAHATFYGGGDAAGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDAKWCLPKSIVVTATNFCPPNNALPNNAGGWCNPPQHHFDLSQPVFQQIAHYKAGIVPVTYRRVSCEKKGGIRFTINGHSYFNLVLVTNVGGGGDVHGVWIKGSKTGWEAMSRNWGQNWQSNSYLNGQSLSFKVTTGDGRTVISNDVAPAGWSFGQTFSGAQFR 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5816495 5818030 - XM_039022564.1 Bhi02g00307 26829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00307 252 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Bhi02g00307 252 PANTHER EXPANSIN 7 251 - -
Bhi02g00307 252 SUPERFAMILY Barwin-like endoglucanases 28 177 IPR036908 -
Bhi02g00307 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 159 IPR007112 -
Bhi02g00307 252 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Bhi02g00307 252 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Bhi02g00307 252 Gene3D - 156 251 IPR036749 -
Bhi02g00307 252 Gene3D - 17 155 IPR036908 -
Bhi02g00307 252 SMART dpbb_1 64 149 IPR007112 -
Bhi02g00307 252 Pfam Lytic transglycolase 64 149 IPR009009 -
Bhi02g00307 252 PANTHER EXPANSIN-A15 7 251 IPR002963 GO:0009664
Bhi02g00307 252 SUPERFAMILY PHL pollen allergen 156 247 IPR036749 -
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Bhi02g00307 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Bhi02g00307 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00307 Bhi-Chr2:5816495 Bhi06g00891 Bhi-Chr6:23389068 7.62E-138 dispersed
Bhi02g00307 Bhi-Chr2:5816495 Bhi07g01546 Bhi-Chr7:44523309 2.08E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00307 - - csv:101222936 478.404