Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00325 ATGGACGCCAATTGGATGCAAAAGTGTGAAGTAATGTCCTTTGAAGACTCATTTCCTTTATCATGCCATCTTTCTCCAATCCCTTTTAGATCAACAAGCTACAGTAATTATTCTGGATTGGATTGGAATTGCAATTTTGGGTTGCAAGACAACATTTTTGAGGTTGTTCCTTTGTTAGAAAGTTTCCCAAATGATGACTCCTTTTTGGAACCCAAGGATGTACTGCCAGTTAACACCTATATATCAGAAAATGGGGTTGGGATCAATTGGAGTGAAATGGAAAGTGGGATTTTTGGGATTGTTGAGGAAGAGCCTGTTTTATTGCTAGAAGGAGGGGATGGTAGAGGAAATGAAGAAAACAGAGAAACGATGAAGAAGGGGAAAAGAAAGTATTTGAAGTCAGAAAATAGCAACAACAAAGGGAGTTATTCAACATCATCGTCATCAAAAATGTTGTCTAGAGAAGCAATATCTGAATATTTCTACATGCCCATAACTCAAGCTGCTAAAGAGCTTAATGTGGGACTCACTCTTTTGAAGAAGAGATGTAGAGAATTGGGTATAAGAAGATGGCCACATAGGAAGTTGATGAGCCTACAAACCCTAATCAAGAATGTCAAGGAGATTCAAAAGGGAGAGGAAGATGGAAATGGAGAAAATAAGTTGAAGAATGTATTGGAAATATTAGAGACTGAGAAGAAGTTGATGGAGGAGAGACCAGATTTGCAATTAGAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAACTACAAGAAGAAAAAGCTCTCTGGAATAATGATCAATAATAATGAACATGATTCTCAATATTTCTCTTCCTCCACCACCACCACCATTCACGATCATGAGGAAGAATATGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCCTTTTCCTCAAGTAACACCCTCTTCATGTAA 954 37.74 MDANWMQKCEVMSFEDSFPLSCHLSPIPFRSTSYSNYSGLDWNCNFGLQDNIFEVVPLLESFPNDDSFLEPKDVLPVNTYISENGVGINWSEMESGIFGIVEEEPVLLLEGGDGRGNEENRETMKKGKRKYLKSENSNNKGSYSTSSSSKMLSREAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKEIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYKKKKLSGIMINNNEHDSQYFSSSTTTTIHDHEEEYDDEEMKYLLSDCSFSSSNTLFM 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5973502 5975137 - XM_039024382.1 Bhi02g00325 26847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00325 317 PANTHER PROTEIN RKD4 10 280 IPR044607 GO:0003700
Bhi02g00325 317 MobiDBLite consensus disorder prediction 114 135 - -
Bhi02g00325 317 Coils Coil 219 239 - -
Bhi02g00325 317 ProSiteProfiles RWP-RK domain profile. 134 220 IPR003035 -
Bhi02g00325 317 MobiDBLite consensus disorder prediction 111 148 - -
Bhi02g00325 317 Pfam RWP-RK domain 152 199 IPR003035 -
Bhi02g00325 317 PANTHER PROTEIN RKD1-RELATED 10 280 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01498 Bhi-Chr1:30740895 Bhi02g00325 Bhi-Chr2:5973502 2.36E-35 dispersed
Bhi02g00325 Bhi-Chr2:5973502 Bhi03g00764 Bhi-Chr3:14216911 1.04E-21 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
356 PF02042 RWP-RK 3.40E-21 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00325 - - cmo:103494325 377.481