Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00342 AGTGGTCAAACACTGCTGCTTTGTTATCTCTTTTGATCTATAAATTTCTATTATAATTATGAGGACAAGTTTTTGAAGGCAGAGAGAGAGAAAAGAAAAGAAAAGTAAAGAGGGTAATTTCATGGAGGCTGAAAAAGCTTTGCCAGCCATAAATGATAGAGTTCAATCAAGTGGAGGAGAAGATGAAGAAGCTGCTCCCAATCCCAAACAAGATGTTCTTCTCAAGGTCCCTTTTATGGGTGACATGGAAAAGCCCTCCATGGAAACTCTCTCAGTCCCATCAGCTTCTAATTCAACTTGGAAGGAAGAGGATAATCAACACCCTGAAGAAAGAATTAAAAGGACAAAAGTTGAAATGAGGGAAGTAAGGGAAGAAAACGAGAGGCTAAAAAGGTATTTGGATGAAATAATTAAAGATTACGAAACATTGAAAAGGAAGTTCCATGAGATGACGAATCATCAAATTAGAGAAGGAAAAAAATCAACACAAACAAGTGGAAGTACAATAAATAATGATCATGAAGTTGAAGAAGTTGATGATATGGTTTCACTCACATTAGGAAGATTCTCAACCCATCAAAACAAGATCAACACTTCTTCCTCCTCACTAACTAAATTAGATCATCATGATCATCATCAAAACATCTTAGACCTCAAACAAGATTATATTATTCAAACCCCATCGATGGATCATCACCATATTCAAAGTCCAACCAATAGTGAACCTAAAGAGGAAGAAGCCGGACATACTTGGCCGCCGGGTAAAATGTCGAAGCCCGACGGTTTGCCCCCACCCGCCATCGGAGAAGATGAGGTTTCTCAGCAAAATCCTCCCAAGAAAGCTAGAGTTTGTGTGAGAGCTCGGTGTGATACTCCAACGATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAGATTGCAAAAGGAAATCCTTGCCCTAGAGCTTATTATCGTTGCACTGGTGCACCCACATGTCCAGTAAGGAAACAGGTGCAAAGGAGTGTGGATGATATTTCCATACTAATCACCACCTATGAAGGAACTCACAACCATCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCCGCCGCGGCCTCGATGCTCCTCTCGGGCCCTTCCTCCTCCACCTCTCAACCCGGTCTTAACCCTTCATTCGCCACTACTGCCGCCGCAGCAAATCTTCATGGAATGAACATGTATCTCTCTAACAACACCAATTCAAAGCAATTCTACTTGCCAAACTCTTCAATGCTATCTTCCCTCAACCATCCCACAATCACTTTAGACCTCACTTCAAACCCTCCTTCAACTTCCTCCTCCTCTCCTTTCCATAAGAATATTCCTTCCACTATTAATAATAATTATCCCCCAAAATATCCTTTCACAAGCCTTGATTTTGGCTCTTCTCAGCCCAACTTCATGTCTTGGAACAACAACAATAATAATAGTGGCTATCAACCTTATAGTAATATAAGCAAAAATAATGCAATGATAGGAATGGCATCAGATTTTGCTAAACAACTCCCTCTCCACACTAACATTTATCAAACCTATCTTCAACAATTTTCCAAATCTTCAACTCCGCCGACACAGCCGCCGCTACCGGACACGATAGCCGCAGCAACTAAGGCAATTACGTCGGACCCAAGTTTCCAATCGGCATTGGCAGCTGCCTTGAGCTCGATTATCGGCGGTGGAAATGGCGGGGAGATGGGTGCTCCTATTTCTAGCTTAGTTGGAGGAGCACAAGCAGCTAAGTCATTAACATGCTCCACCTCCAAGAGTCCTTCTTCATCTCCTGCCGATAGTAGAGAAAATGGGAAGTGAAAAATGTTGGATGATGAATTTTATTTAGAACTTGAGATTTGTAAATAACCCATCAACAAATCAAGAGTTCTCTCTCTTTTTCTTTCTTTCTTTTTTCTTTTTTCTTTCTTTTTTTGATAAAAAAAAGAAAGCTAGACTTTCAGCCATTGATATCATGTCAAGAGAAATGTTCATATGTAGACAATTTTTGGATGTGAATTGATCAACA 2048 40.77 MEAEKALPAINDRVQSSGGEDEEAAPNPKQDVLLKVPFMGDMEKPSMETLSVPSASNSTWKEEDNQHPEERIKRTKVEMREVREENERLKRYLDEIIKDYETLKRKFHEMTNHQIREGKKSTQTSGSTINNDHEVEEVDDMVSLTLGRFSTHQNKINTSSSSLTKLDHHDHHQNILDLKQDYIIQTPSMDHHHIQSPTNSEPKEEEAGHTWPPGKMSKPDGLPPPAIGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPTCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSQPGLNPSFATTAAAANLHGMNMYLSNNTNSKQFYLPNSSMLSSLNHPTITLDLTSNPPSTSSSSPFHKNIPSTINNNYPPKYPFTSLDFGSSQPNFMSWNNNNNNSGYQPYSNISKNNAMIGMASDFAKQLPLHTNIYQTYLQQFSKSSTPPTQPPLPDTIAAATKAITSDPSFQSALAAALSSIIGGGNGGEMGAPISSLVGGAQAAKSLTCSTSKSPSSSPADSRENGK 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6650293 6655788 - XM_039024149.1 Bhi02g00342 26864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00342 572 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00342 572 Gene3D WRKY domain 239 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00342 572 SUPERFAMILY WRKY DNA-binding domain 247 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi02g00342 572 Pfam WRKY DNA -binding domain 255 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00342 572 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 58 541 - -
Bhi02g00342 572 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 541 IPR044810 GO:0003700
Bhi02g00342 572 MobiDBLite consensus disorder prediction 196 211 - -
Bhi02g00342 572 MobiDBLite consensus disorder prediction 1 70 - -
Bhi02g00342 572 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi02g00342 572 MobiDBLite consensus disorder prediction 553 572 - -
Bhi02g00342 572 Coils Coil 72 106 - -
Bhi02g00342 572 MobiDBLite consensus disorder prediction 190 239 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00342 Bhi08g01407 CCT
Bhi02g00342 Bhi08g01407 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00342 Bhi-Chr2:6650293 Bhi08g01408 Bhi-Chr8:41799321 4.96E-117 dispersed
Bhi02g00342 Bhi-Chr2:6650293 Bhi08g01407 Bhi-Chr8:41799321 1.37E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
361 PF03106 WRKY 1.30E-23 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00342 - - csv:101213180 766.533