Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00374 CACTCTTCCTTTGGTCAAAAATTACAGCCGAGGAGAGAGACGGAGAGAGCACACAGCACAGTGTGCGCCACTTCTGCCCCAAAAGATCAGTCTCTCTCTCTCTTTCTCGTCGCATAGCAAAGCAGAGGCATCCATATTTCTCTCGGACCCCATCTGAAAAAGCCAATCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTCAAGCTACTTCATAAATAACATCTCCACTACCTACACTTTCACTCCAATTCCCAATCTCCATCTTCAAATACATACCCCAAACCTCTTCGATTTCTCTCTGGAACTCCGACATTGACATCTGATTTTGATCCCTTGCGAATTTCTGTTTCTGGTTCATTTGGGTCAGCCGGAAATGGATCCTCCACTTGTTAATGAATCCTCCTTCTCCGCTGCGAATCCTTCTGCTTACAGTTTGGCCTCGATTTGGCCTTTTGGGGGGGAGCAGGGAGGGAGCGCATTGGGGCTTCGAATGGCTAATTTGGTTCAGAATCTTAGTGGGTTTTCTGAGAGCTCCACGAATCGCGATGGATCAATGGAAGAATCGACAGTGACAGAGCAGAGTGGCGGTGGGAGGAAGAGGAAGGATGTGAGCTCCGAGGATGAATCTTCGAGAATGGTTTCCACTAGTAGTGCTAATCAATTGAGTAACTCAAAAGGTAAACGGATGAAAGTAGTGGAATCCAGAGATGAAAATGATGGTATAAAAGCTGAAGTAGAACCTAGCTCAGCTGATGGTAAGAAGATGGCCGAGCAAAGCCCAAAACCCGAACCACCAAAAGATTACATTCATGTCAGAGCAAGAAGGGGCCAAGCAACTGATAGTCATAGTTTAGCAGAAAGAGCGAGAAGAGAGAAGATCAGTGAGAGAATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTTATTGGAAAAGCACTTGTCCTTGATGAGATAATAAATTACATCCAATCACTGCAACGTCAGGTCGAGTTCCTCTCCATGAAGCTTGAAGCTGTGAATTCCAGGATGAACATAAGCCCTGGCCTAGAAGGTTTTACTGTAAAAAATATTGTTAATCAACCGTATGATGCAGCTGGAATATTATATGGTTCACAAGCAGCAAGAGATTATACCCAAGGTGCACAACCTGAATGGTTGCATATGCAGATTGGTGGAAGTTTTGAAAGAACGTCTTAGATCTCAATAGGCAACTTATAATCAAATGTCAAAATTGATTTGGCTTTTCTCATTTAGTTCAGTAGAGATATATTATATATATGTTATATATGTTTGATCATTTAGTATCGAATACCTGTATTATCCATTCGATATAATTGGAACGATCAATTACTTGTATTGTCTGCAGAAACTGAACCTACTTCCAATTTGGAACTTACCGACTGTAATTTGTACTGCCGTTGTACTGGAGAAAAAACATACCTAGCTTGGATCATTTGAGAGGCTGGGGGTGGTTTGACACCTTGCATTTTCTTTCCTTCTTTAGAACATGGTGTAAAATTTTGACCGAAA 1538 42.52 MDPPLVNESSFSAANPSAYSLASIWPFGGEQGGSALGLRMANLVQNLSGFSESSTNRDGSMEESTVTEQSGGGRKRKDVSSEDESSRMVSTSSANQLSNSKGKRMKVVESRDENDGIKAEVEPSSADGKKMAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNISPGLEGFTVKNIVNQPYDAAGILYGSQAARDYTQGAQPEWLHMQIGGSFERTS 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7074419 7078510 + XM_039022399.1 Bhi02g00374 26896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00374 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 223 IPR036638 GO:0046983
Bhi02g00374 276 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 275 IPR024097 GO:0006355
Bhi02g00374 276 MobiDBLite consensus disorder prediction 69 84 - -
Bhi02g00374 276 MobiDBLite consensus disorder prediction 50 68 - -
Bhi02g00374 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 203 IPR011598 GO:0046983
Bhi02g00374 276 MobiDBLite consensus disorder prediction 50 144 - -
Bhi02g00374 276 Coils Coil 200 220 - -
Bhi02g00374 276 MobiDBLite consensus disorder prediction 85 103 - -
Bhi02g00374 276 Pfam Helix-loop-helix DNA-binding domain 157 204 IPR011598 GO:0046983
Bhi02g00374 276 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 275 - -
Bhi02g00374 276 SMART finulus 159 209 IPR011598 GO:0046983
Bhi02g00374 276 CDD bHLH_AtBPE_like 143 225 - -
Bhi02g00374 276 Gene3D - 150 224 IPR036638 GO:0046983
Bhi02g00374 276 MobiDBLite consensus disorder prediction 104 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00374 Bhi-Chr2:7074419 Bhi04g01237 Bhi-Chr4:30806377 2.76E-100 dispersed
Bhi02g00374 Bhi-Chr2:7074419 Bhi05g01240 Bhi-Chr5:44812916 1.35E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
367 PF00010 HLH 2.20E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00374 - - csv:101215588 512.301