Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00384 GGCCAATCTGTACAGTGCTTTGATTCTGACTCTGCTTTCCCTTTCCTTTTGTTTTGACTGATCATGGCGTCAATTGACAAGTGGCCCTAATCTTTTCTGCGCTGGGGATTTCGATTCTCTCTCCCGAATCACAATAAACAATCCCCTCTCCTCCCTTTCTCTTTGATCTCACTGAAATTTTGGATCCTCAGAATCTCTGCTTTTACTCCTCCCCATTAATTAAACCAACCCATTTCCCCCACTTATAAGATGACCCCATTTTTCATCTTCCATCACCAACCCTTTTCTCTTCTCTCTCTTTCCTGGCCATGGCGACGGTTCCTGACCTCCTTCGCTGCAACCCCGTCGACGGACTTGTTGGGGTCTCCGACGATTCGAAACAGAGTAGTAGTTGCGGTTCGACCCAGCTTCATGTTCTTGCAGTCGATGATAGCCTTGTCGATCGGAAATTTATTGAGCGGTTGTTGAAGATCTCGTCATGTAAAGTTACTGCTGTTGAGAGCGGGAGAAGTGCTCTTCAGTATCTGGGTTTGGATGGGGAAACAAATTCTGTTCAGTTTAGTAGTGGTTTGAAGGTGAATCTTATTATTACAGACTACTCCATGCCTGAAATGACAGGATATGAACTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTTTGGCTCGAATAGATAGTTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGGAGGAAAGAAAATTGGTTTAAAAAGGAAGCTCCATCTTGATCATGATCACAACCCTTTGTGTCTGGGGTCTCTGGTGCCGTCGGTGACAGCATTTGACCATTGCCAAGGATTTCTGCAACGATCTCCGCCCTCGTTACAACCATCGCCGATCATACGTTCGTTGAAGAAACCTAGGTTCCTCAATAGCAATTAATTCACATGATGATGGAGTGCAAGTGATAAAAGTTCTTTGATCTTGTTATTATTTTTTGTATAAATGTTGATTTGGGTGTTATTGGGAACTTCCCCCATTTGCTGTTTCTGTGTTTTTGGTTCATTGTTGTTTAAAAAAACTCAGAGATTTAAAAACAGAGAAAAAGAAAGTATGAAGTCATTAGTTGTAAGCCTTAAAATGAGATTTTCCCCCCCTTCTTTTTTGGGGTGGTGATGTGAAAGTATTTTTAAGTTTGAATGAACATAATAGACAAATTTTGTAA 1287 41.18 MATVPDLLRCNPVDGLVGVSDDSKQSSSCGSTQLHVLAVDDSLVDRKFIERLLKISSCKVTAVESGRSALQYLGLDGETNSVQFSSGLKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENILARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENGGKKIGLKRKLHLDHDHNPLCLGSLVPSVTAFDHCQGFLQRSPPSLQPSPIIRSLKKPRFLNSN 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7450725 7452732 - XM_039023790.1 Bhi02g00384 26906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00384 231 Gene3D - 33 185 - -
Bhi02g00384 231 ProSiteProfiles Response regulatory domain profile. 35 163 IPR001789 GO:0000160
Bhi02g00384 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 187 IPR045279 GO:0009736
Bhi02g00384 231 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 28 187 - -
Bhi02g00384 231 CDD REC_typeA_ARR 36 158 - -
Bhi02g00384 231 SUPERFAMILY CheY-like 33 158 IPR011006 -
Bhi02g00384 231 SMART REC_2 34 159 IPR001789 GO:0000160
Bhi02g00384 231 Pfam Response regulator receiver domain 36 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00384 Bhi-Chr2:7450725 Bhi07g01668 Bhi-Chr7:46703290 3.40E-58 dispersed
Bhi07g01229 Bhi-Chr7:38788168 Bhi02g00384 Bhi-Chr2:7450725 1.44E-53 transposed
Bhi12g01132 Bhi-Chr12:33965684 Bhi02g00384 Bhi-Chr2:7450725 3.04E-54 transposed
Bhi02g00384 Bhi-Chr2:7450725 Bhi07g01667 Bhi-Chr7:46703290 1.18E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
369 PF00072 Response_reg 2.30E-20 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00384 K14492 - csv:101214143 363.614