Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00386 CGGTTCTTCAAATCTTCTGTTTTAAAATCTTCAAACGATTCCCTCCAATTCTCTCAAACTCCGTAAATCTCTTCCTTCTTCATTCTGAGATTCCATAGCTATGGCGGCCAATCTTCATCGACCAGTACCACACTCTTCTTCAAGCGCTTATTCCCGGAAGCAGAAATCCCTCGGCCTCCTCTGCGCCAATTTTTTGAGATTGTACGATCGAGATGATGTTCAGTTGATCAGCCTCGACAATGCTGCCTCTAGGCTGGGTGTTGAAAGACGACGTATCTACGATATTGTTAACGTTTTAGAAAGCGTTGGAATTTTGTGTAGAAAAGCGAAAAATCAATATAGTTGGATAGGATTTTCTGGTATTCCTAAGGCACTACGGCAACTTAAGGAAGAAGATCCGAAGGGAAATTGCTCTACCATAGATGAAAATGATAACTCAAAGTTGATAGATGACGAAGATGAAACATGTTCAGATCTCACATCTGTAAGCCACGAGTCTAAATCTTCTGCGTCGGCGAGATATGTGGCATCAGATAATCGGAGGGAAAAATCTCTTGCACTTCTAACGCAGAATTTTGTCAAGCTCTTTATTTGCTCTAACGCACATGTGATTTCACTTGATGAAGCTGCAAAATTACTGCTAGGTGATGCACAAAGTGCATCGATAATGAGAAGCAAGGTCAGACGCCTTTATGATATCGCAAATGTGTTAGCAGCAATTCATCTTATTGAAAAGACGCAAACAGTTGATACCAGAAAGCCTGCATTCAGGTGGCTAGGATTGAGAGGTAGAGTCGAGAATTGTCGTGCAGGCAAGCCGGTGGACTCAAATAAAAGGAGTTTTGGAACCGATATAACTAACATCAATTTGAAGAAAAACAGATTGGCAAATTCATTTGATCTGAATAAGAGCCCCAATTCCCAGCAACAAAAGCATGTGCAGCTTGAAGGTTGTGGGGTTGAAGCAGATGGGGGCGAGTTAGAGCGCGATACAAATTGTAAGAGCTTCAAATTTGGCCCCTTTTCTCCCAGTGATAGACTAGAAGCTAAAGCATCAAGAAATGAAGCAAATCGGTGTCGTAATAACTGGGTGAGCCTTGCCTCGGCTTACCATCCTCAGTATCAAAACCAAGCTTTAAGAGAACTATTCTCCCATTACAAGGAAGCCTGGAAGTTATGGTACTCTGAAACTGTGAACAGATCATGAACACAAATCCCTGAAGCATAATTCTTGTCAACCAACATCTATTTTGACTTAGTATAGCATTGAAGTCATCCTTATGATGATTGATTTTTGTAGCTTTGGGTATCTCTTGTCAACCAACATCCATCAAGTATAGCATTCGAGTCATTCTTTTGTTGAACTGATTTTTGAAGCATAGGGTACTTGGCTGTGCCAACTCCGATCTCTGGAGGCCATCATCATGGTGTGTAGATAGTTGCACTGCGCTTAAAGCCTAGGGACGCATAATGACTTGGAATGTAGCTAGTTTATCTACAGATAAGTAGTTTATTGTCTGTGTATTTTGCATAATTGAATCAATGTAGTAGCCAATTTCAATCAGATCTCAATTTACAGAAGTCCGCCTCCACACCCGTTTTTCGAGTAGAACAGGGTAATATGAAACAAAAATGTACTAACTTATTATTTTTGTTTAGTTTTTTTTTTTTTTCATAGAATTATTTCCTCTT 1692 40.13 MAANLHRPVPHSSSSAYSRKQKSLGLLCANFLRLYDRDDVQLISLDNAASRLGVERRRIYDIVNVLESVGILCRKAKNQYSWIGFSGIPKALRQLKEEDPKGNCSTIDENDNSKLIDDEDETCSDLTSVSHESKSSASARYVASDNRREKSLALLTQNFVKLFICSNAHVISLDEAAKLLLGDAQSASIMRSKVRRLYDIANVLAAIHLIEKTQTVDTRKPAFRWLGLRGRVENCRAGKPVDSNKRSFGTDITNINLKKNRLANSFDLNKSPNSQQQKHVQLEGCGVEADGGELERDTNCKSFKFGPFSPSDRLEAKASRNEANRCRNNWVSLASAYHPQYQNQALRELFSHYKEAWKLWYSETVNRS 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7466018 7468674 + XM_039023553.1 Bhi02g00386 26908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00386 368 PANTHER TRANSCRIPTION FACTOR E2F 9 360 IPR015633 GO:0000978|GO:0006357
Bhi02g00386 368 SUPERFAMILY Winged helix DNA-binding domain 149 228 IPR036390 -
Bhi02g00386 368 Gene3D - 142 229 IPR036388 -
Bhi02g00386 368 Gene3D - 14 86 IPR036388 -
Bhi02g00386 368 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 9 360 - -
Bhi02g00386 368 SUPERFAMILY Winged helix DNA-binding domain 18 83 IPR036390 -
Bhi02g00386 368 Pfam E2F/DP family winged-helix DNA-binding domain 20 84 IPR003316 GO:0005667|GO:0006355
Bhi02g00386 368 Pfam E2F/DP family winged-helix DNA-binding domain 149 227 IPR003316 GO:0005667|GO:0006355
Bhi02g00386 368 SMART E2F_TDP_2 19 84 IPR003316 GO:0005667|GO:0006355
Bhi02g00386 368 SMART E2F_TDP_2 147 227 IPR003316 GO:0005667|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00386 Bhi08g01449 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00386 Bhi-Chr2:7466018 Bhi02g00388 Bhi-Chr2:7466028 0 dispersed
Bhi02g00385 Bhi-Chr2:7466016 Bhi02g00386 Bhi-Chr2:7466018 0 tandem
Bhi02g00386 Bhi-Chr2:7466018 Bhi02g00387 Bhi-Chr2:7466026 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
371 PF02319 E2F_TDP 2.20E-19 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00386 K09391 - csv:101210753 570.466