Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00413 TTCTGCCGTCTGGCTTTCTCTTTCTCTTTCTCTTTCTCTTCTCCCACAAACTCCCAACCTTCTCTTCTTCTGTTTGCGCATTCGATTTTTCTCACTCTAGATTCTCGCACTCTTCTCTCTCTTCTTTTCTAGGTTTGAAAGGCGGCTCGAAATCTATAATCATCTCTTTGCGTGTGGTTGGATCTGGACTTTAATTCGATCACTCTCCGTCTTATAGATAAGGTGGGATCGAGGCTGGACTTGGGGAAAATGCTAGGCTATGCATGGGCGTCGAGGTGAGGACTGGAAACGGATTCGGCACATGTGGACAGTCCCCACACGTGGTACTCAGATCGTAGAAGCAGATGGTTCTTCGTCATCGTCTTCGTCTGCACCTAATTCGTTTTGCAAGGGTGGACGTAGGATTAGTGTTGGTGATTGTGCACTTTTCAAACCCCCACAAGATTCCCCACCTTTTATTGGCATAATCCGGTGGTTGACGACTGGTAAGGAGAATAAGTTGAAGCTAGGTGTGAATTGGCTTTATCGATCTTCTGAACTAAAGCTCGGCAAAGGCATCCTTTTGGAAGCTGCGCCGAACGAGGTCTTCTATTCCTTTCATAAGGATGAAATTCCTGCTGCATCTTTACTCCATCCGTGTAAAGTTGCATTCCTTCCAAAGGACGCTGAACTTCCATCTGGGATTTCGTCATTTGTGTGTCGAAGAGTGTATGACATAACTAATAAGTGTTTATGGTGGCTAGCTGATCAGGATTATATTAATGAACGTCAGGAAGAAGTAGACCAATTGTTATATAAGACAAGATTAGAAATGCATGCTTCAGTGCAACCCGGCGGTCGATCACCTAAGCCTACAAGTGGTCCAACATCAACGTCTCAGTTAAAAGCTAATTCAGATAGTGTTCAAACGACTGCCTTTCCTTCTCATACAAAAGGCAAGAAAAGAGAAAGGAGTGACCAAGGATTGGAATCTGTCAAACGAGAACGCATCATCAAAGCTGATGAAGGTGATTCTGCTAACTGCAGATTGGAAAGTATTTTAAAGTTAGAGATTGCAAAAGTTGCTGAAAAAGGAGGCCTAATTGATTCCGAAGCTGTCGAGAAATTGGTGCAGCTTATGCTGACAGATAGAAATGACAAAAAAATTGATTTGGCTGGCAGATCAGCACTTGCAGGTGTGATAGCTGCCACAGATAAGGTTGAGTGCCTTGGTCAGTTTGTGCATCTTAAGGGTTTACCTGTACTTGATGAATGGCTCCAAGAGGTTCACAAGGGAAAAATTGGCAGTGGTGGTAGCCCCAAGGATAGCGATAAAGCAGTTGAGGAATTTCTCCTGGTTTTGCTTCGTGCCCTCGATAAACTACCTGTTAATCTTCCTGCTTTACAAATGTGCAACATTGGAAAGTCTGTGAATCATTTACGCTCACATAAGAATTTGGAGATTCAGAAGAAAGCAAGGAGCTTAGTGGACACATGGAAAAAGCGTGTTGAAGCTGAAATGAACATTAATGATGCGAAATCTGGTTCAAACCAAGCTGTTGCATGGAGTGCAAGAACTCGTCCATCTGAAGTTTCTCATGGAGGGAGGAATCAAGATGCATCCTCTGAAGTTGCGATGAAGAGCTCGGTTTCTCAGCTTTCTACATCAAAATCTGCTTCAGTTAAGCTTGCCCAGGATGATAGTGTTACAAGATCTGCATCTGCCTCTCCTGGTTCTATGAAACCAGTTTTATCACCTGCATCGGCAAGTATTAACTCAAAAGATGGTTCTTCCAGAAATCCGGGTGTTTGTGGCACAACTGATCTTGCTCAAACTATTGCCAGGGATGAAAAGAGTAGCAGTTCCAGTCAGTCCCACAATAATAGTCAATCTTGTTCTAGTGAACATGGTAAAAGTGGTGGTTTAGGGAAGGAGGATGCAAGAAGCTCTACCGCTGGTTCAATGAGTGTGAATAAGATATCAGGTGGTGGATCTCGCCAGCGCAAGTCAGTTAATGGATATCCTGGTCCTGTTCTCTCGGGGGGTCAACGGGATGTAGGGTCGGGGAAAAGTTCTTTGCACAGAAACACAGTTTTGGAGAGATCATCACAATCTGGAATGACCTTTGAAAAGGCATCCGATGGCCCTATTGGTGAGGGAAACAGTCCTAAATTGATAGTGAAGATCACCAATCGTGGCCGGAGTCCTGCACAGAGCGCTAGTGGAGGATCTTTTGAAGATCCTTCGACAATAAATAGCAGGGCTTCTTCTCCTCCACTTTCGGAGAAACATGATCAACTTGATCACAGTAAGAGTGATACATGTCAACCTAATATTACTGGAGATGTGAATGCAGAGTCCTGGCAGAACAGTGATGTAAAGGATACGATGGTCGGTGCTGATGATGGTGATGGATCTCCTGCTGCTGTAAATGGTGAAGAGCGCTGTCGGGCTGCAGAAGATGTAGCAGTTTCGAAGGCTACTCTGTCATCATTAATGAATGATCATAAGAATGGAAAGTTACACGAGGCTTCTTTCAGCTCCATAAATGCTTTAATTGATAGCTGTATTAAATGCTCTGAAGCTAGTATGCCTACCTCGCTTACGGATAATGTTGGAATGAATTTACTCGCTAGTGTAGCAGCTGTCGAGATGTCGAAGTCTGATTATGTTTTGCCTTCCGATACTCAAGGAAATATGTCTGCGCTGGACCGCTCTTCTAGAGGCAGTGATTGTAAAATCAAAGCATCTTGTCCTGAAGAGGATGCTAGAGATAACATGCCGTCAAATGATGCTATGGATGTTACTGAGCAGGGTGTGATCACCAGTTCCTTTGGAGGAAAAAATGTGGATGGAAGGGCTGCTTCACAATCTGAAGAGAAACCGGTTGGAGATCTGAATGGTCATTCAAAATCTTCTGGTGTAAACTTGCCACAAACTGCTGTGCCATTGGCAGATGGGTGTATGAAAATGAACGAGGCTGGAGGCCCTGCCTCCCCTGCTAGAGTGCCAGAGAAGGGCTATGAGATCAAGGGGGCTAAACCAGTCAAGGAAAGAAAGACGGCTGATGTAACAGATGGAGATAGCAGCCCAGAATCGAAACCAAAACCAAGCAGTTCTTTTCCTGATGGTGGCATGGTTGGTGATGGTAGTTCGAATCGGGAAGTTGAAATGGATGTTCTTGACGAACCTTTGCATCGCCGGCAAGAAGTTGATGGCAAGACGAATAATAGACTGAATGGTATTAGTACAGCAGATCAAAGGTTATCTTCCAAGTTGAACAGTGATTCTGCGAAATTAAGGAACGATGGATTACTTCAGGCTTCAGGCTCTTCAAGTGATCTGGTTTCTGTAAATGCAAGTGGGATGAAGGGCGAGAAGGTTGATGAAACTGCAGCTGATGTCAAGCTTGAAAAACATCAAAGTGATTTAGATCCTATGCCTTCCGAGTCCCGAGGTTTAGGTGGCATGTGTTCAGCTATCAACCATGAGGATGAGCATGTGGAGGAGAATTTGGAATCTAAAGAAAATACAGAGAGAAGTGGAGGACAAGCACATCATGGGCATTCTATTGTTTCTCCTGTTCAAGAAACTGAGCAGCCTAAGCCATCCAAGAGATCCAAATTAGCTGGTGTTGAAGCAGAAGAGGCAGAGGAGTCTACATCCACTGCTGCAGATGCTGCTTCCATGTCTACTGTGGGGGTGTCAGATATGGATGCTAAGTTGGAATTTGATTTGAACGAAGGCTTTAATGTAGATGATGGAAAATGCAGTGAGCCAAGCAGCTTTACACCGTCTGGTTGTTTGACAACTGTTCAGTTAATTAGTCCATTGCCCCTTCCTGTTTCTAATGTGGCAAACAACATTCCTGCTTCAATTACAGTTGCAGCTGCGGCAAAAGGACCTTTCGTACCACCTGATGATCTATTGAGGAGTAAAGGGGAACTGGGTTGGAAAGGATCAGCAGCCACAAGTGCTTTTCGACCGGCTGAACCTAGAAAAGTTCTAGAAATGCCCCTAGGACTTGCAACCACTCCACTTGCTGATGTTGCAGGCAGTAAAATTTCTAGACCCCCATTGGATATTGACTTGAATGTTCCCGATGAAAGGATTCTTGAGGATATGAATTCTCAGATGTCTACGCAGGAGGTGGCTTCTAAGCCTGACCTGGCTAATAATCGTGATCTGGCACATGGTATAGGTCCTACACATGGACGTTGCTCTGGAGGGCTAGATCTTGACTTGAACCGAGTTGATGATGCTCCTGATCCAAGCAACTTCTCCTTGAACAGTTGTCGTAGAATAGATGCTCCTCTTAGTGTTAAATCATCTACTGTTCCTCTCAATGACAAGGTGAATTTTCGTAGGGACTTTGATTTAAATGGACCTATTGTTGATGAGGCCACTACTGAACCAACAATATTTCCTCAGCATGCCAGAAGCAGTATGCCATCCCAGCCATCTGTTTCTGGCCTTTGGATGAACAATGCAGAAATGGGAAATTTTCCGTCATGGTTTCCTCCAGGGAATGCCTATTCAGCTGTTGCAATTCCCTCAATTTTGCCTGATAGAGCAGAACAGTCTTTTCCAGTTGTCGCAACAAATGGACCACCCAGGATTTTGGGACCCACAAGTGGTAGCAGTCCATATAGCCCTGATGTCTTTAGAGGGCCAGTACTATCATCTTCTCCGGCAGTCCCTTTTCCTTCTGCAACTTTTCAATATCCTGTCCTGTCTTTTGGAAACAGCTTTTCTCTACCTTCGGCCACGTTTTCAGGTAACGCAACAGCATACGTTGATTCATCATCTGGTAGCAGGCTTTGCTTCCCAGCAGTCCCTTCACAGTTCTTAGGTCCTCCTGGTACAGTTTCAACCCCTTATCCAAGACCTTATGTTGTCAGTCACTCAGATGGCGGCAACAATACTAGCTCTGATAGTAGTCGAAAGTGGGGAAGACAAGGTTTAGATCTAAATGCTGGTCCTGTAGTTCCAGACATTGAAGGAAGAGAGGAATCATCAACCTTGGTACCAAGGCAACTATCTGTTGCCGGTTCGCAGGCCACTACCGAAGAGCATGTGAGGGTTTACCAGCCAGCAATTGGCATAATGAAGAGAAAGGAGCCAGAGGGAGGATGGGATGGGTACAAACAGTCATCATGGTAGTAGGAAGATCCCCGTTGAATCCTGATAGCTGTGGTTAGAGGGATTTGGATTGAGCTGACTTCCACTGGTTGTCATCTAACTTTGTGTGCTTTTCGGAGGAGGTGGTGAGTAGTATCTCATGTTCTTCATGGTCTCCAACCCCACACCTTTTTCTCTGTATCAGTTGTAACTTCTTTTTTAAAGAAAAGAAAAAAAGAATGTCTGGGGCCTTTCAAGCTTCTTCTTGTCACTTGAATTTGTTCTGGGTGGCTGCAGATAATTTCTTCTTTGTAGATATTTAACTGTTGGGAAAAGCATGCACTATCTGTTGCCCAGACACTTGATAATTGGTGCCGATACAGGTGTTCAGTGCATCAATTTAAATATACTGTTGAACTCAAAACCCCCCTTTCCATCCTTTTTGCAGCTATTTCACCAATTATGAACCGGTGAGAATTGCTTTTGAGCATATTGATAATTTCATTTTTTCCCCTTCAGGATGAAAAGCAGAGGGTGCAATCTGAATTCTGACGCATGCATCTCATTTCAATTCTTTTCATTTGCCCCTACCCCTTTCCCATCCCCTCTCTCGTTTCTACATTCTCTATCTTGCAAAATAAATCAATGTTCCCCATTTCCCCATGCTGGAATCACTTTTTAATTTTACATGGAGTTTCTGTA 5803 44.22 MHGRRGEDWKRIRHMWTVPTRGTQIVEADGSSSSSSSAPNSFCKGGRRISVGDCALFKPPQDSPPFIGIIRWLTTGKENKLKLGVNWLYRSSELKLGKGILLEAAPNEVFYSFHKDEIPAASLLHPCKVAFLPKDAELPSGISSFVCRRVYDITNKCLWWLADQDYINERQEEVDQLLYKTRLEMHASVQPGGRSPKPTSGPTSTSQLKANSDSVQTTAFPSHTKGKKRERSDQGLESVKRERIIKADEGDSANCRLESILKLEIAKVAEKGGLIDSEAVEKLVQLMLTDRNDKKIDLAGRSALAGVIAATDKVECLGQFVHLKGLPVLDEWLQEVHKGKIGSGGSPKDSDKAVEEFLLVLLRALDKLPVNLPALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWKKRVEAEMNINDAKSGSNQAVAWSARTRPSEVSHGGRNQDASSEVAMKSSVSQLSTSKSASVKLAQDDSVTRSASASPGSMKPVLSPASASINSKDGSSRNPGVCGTTDLAQTIARDEKSSSSSQSHNNSQSCSSEHGKSGGLGKEDARSSTAGSMSVNKISGGGSRQRKSVNGYPGPVLSGGQRDVGSGKSSLHRNTVLERSSQSGMTFEKASDGPIGEGNSPKLIVKITNRGRSPAQSASGGSFEDPSTINSRASSPPLSEKHDQLDHSKSDTCQPNITGDVNAESWQNSDVKDTMVGADDGDGSPAAVNGEERCRAAEDVAVSKATLSSLMNDHKNGKLHEASFSSINALIDSCIKCSEASMPTSLTDNVGMNLLASVAAVEMSKSDYVLPSDTQGNMSALDRSSRGSDCKIKASCPEEDARDNMPSNDAMDVTEQGVITSSFGGKNVDGRAASQSEEKPVGDLNGHSKSSGVNLPQTAVPLADGCMKMNEAGGPASPARVPEKGYEIKGAKPVKERKTADVTDGDSSPESKPKPSSSFPDGGMVGDGSSNREVEMDVLDEPLHRRQEVDGKTNNRLNGISTADQRLSSKLNSDSAKLRNDGLLQASGSSSDLVSVNASGMKGEKVDETAADVKLEKHQSDLDPMPSESRGLGGMCSAINHEDEHVEENLESKENTERSGGQAHHGHSIVSPVQETEQPKPSKRSKLAGVEAEEAEESTSTAADAASMSTVGVSDMDAKLEFDLNEGFNVDDGKCSEPSSFTPSGCLTTVQLISPLPLPVSNVANNIPASITVAAAAKGPFVPPDDLLRSKGELGWKGSAATSAFRPAEPRKVLEMPLGLATTPLADVAGSKISRPPLDIDLNVPDERILEDMNSQMSTQEVASKPDLANNRDLAHGIGPTHGRCSGGLDLDLNRVDDAPDPSNFSLNSCRRIDAPLSVKSSTVPLNDKVNFRRDFDLNGPIVDEATTEPTIFPQHARSSMPSQPSVSGLWMNNAEMGNFPSWFPPGNAYSAVAIPSILPDRAEQSFPVVATNGPPRILGPTSGSSPYSPDVFRGPVLSSSPAVPFPSATFQYPVLSFGNSFSLPSATFSGNATAYVDSSSGSRLCFPAVPSQFLGPPGTVSTPYPRPYVVSHSDGGNNTSSDSSRKWGRQGLDLNAGPVVPDIEGREESSTLVPRQLSVAGSQATTEEHVRVYQPAIGIMKRKEPEGGWDGYKQSSW 1627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7738432 7745695 + XM_039023458.1 Bhi02g00413 26935

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00413 1627 SMART BAH_4 47 162 IPR001025 GO:0003682
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 556 575 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 639 667 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 1069 1090 - -
Bhi02g00413 1627 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 276 414 IPR035441 -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 416 694 - -
Bhi02g00413 1627 Pfam TFIIS helical bundle-like domain 361 410 IPR017923 -
Bhi02g00413 1627 Pfam BAH domain 49 156 IPR001025 GO:0003682
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 914 937 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 1542 1558 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 223 239 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 188 239 - -
Bhi02g00413 1627 ProSiteProfiles BAH domain profile. 47 162 IPR001025 GO:0003682
Bhi02g00413 1627 Gene3D - 34 255 IPR043151 -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 592 617 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 1540 1580 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 1108 1122 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 982 1026 - -
Bhi02g00413 1627 CDD TFIIS_I 335 411 - -
Bhi02g00413 1627 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1627 - -
Bhi02g00413 1627 SMART TFS2_5 333 412 IPR003617 GO:0005634
Bhi02g00413 1627 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 315 424 IPR035441 -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 1045 1137 - -
Bhi02g00413 1627 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1627 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 849 1033 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 962 981 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 417 544 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 679 694 - -
Bhi02g00413 1627 MobiDBLite consensus disorder prediction 193 222 - -
Bhi02g00413 1627 ProSiteProfiles TFIIS N-terminal domain profile. 327 413 IPR017923 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00413 - - - bhj:120071278 3166.33
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00413 Bhi-Chr2:7738432 Bhi02g00415 Bhi-Chr2:7738432 0 dispersed
Bhi09g02076 Bhi-Chr9:59337226 Bhi02g00413 Bhi-Chr2:7738432 2.19E-10 dispersed
Bhi12g00259 Bhi-Chr12:7851535 Bhi02g00413 Bhi-Chr2:7738432 1.95E-24 dispersed
Bhi02g00413 Bhi-Chr2:7738432 Bhi02g00414 Bhi-Chr2:7738432 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g704 . . . . Bpe12g00585 . . Bma12g01028 . . . . Car10g00132 . Sed08g1505 . Cpe04g01543 Bhi02g00413 Tan09g2404 Cmetu02g1332 . Hepe09g0183 . . Cla06g01645 Cam06g1830 Cec06g1879 Cco06g1885 Clacu06g1789 Cmu06g1731 Cre06g2549 . . Cone13ag0127 Cone19ag0131 . . . . Blo13g00047 Blo15g00276 . . Bpe07g00824 . . Bma08g00176 . Cmo10g00147 Cmo11g00110 . . . . . Cpe18g00833 . . . . . . . . . . . . . . Lsi06g01533 Csa01g00170 Chy02g02561 Cme02g01950
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003613 1 4 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 2 2 1 1 1 1 4 3 1 47
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
375 PF01426 BAH 7.20E-09 No_clan Bhi TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00413 Bhi_Chr02 FPKM 14.991824 15.168372 63.013847 64.857651 28.386539 22.120306 27.81329 2.273325 1.913276 2.242334