Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00454 TAAAGAAAATTGACAGAAAAACTGCATTTCGTGAACAACGTATCCGACCCTGAAAGAAATTCTTCTCCTATAGTTCCCGTTATCGTATCTCTTTTTGCCAGCACCGTAGCCTCACTCGTTCTGAATCCTGTGGATGACCTTTGATCTTTCTAGTTCTTTTCTGGTTTTCTCGATGTTGAATCGAACTTTTTTGTGATCGCTTGATTCCAAGATGTGATGTTATTCTCCAAATCTTAGGTTCGGCTTCAAGTTGTGTTGGCAATCTGGTTTGTAATGAGCGATTCACTTGATCGGATGTTTTCTTGATTAATTTCGAAGGAATTTTTGTTTTTCGATTTTGTTCTTCCTATTTTGCTTTTGTAGTTTTGTTTTTAGTTTTTGTTCTTCATTTTTAATGGTTTTCAATGATCAACGGAGACGGGACTTGTGAGGGTTTCTCGGAAGTTGTCTCGGGCGACCTGTTGGATTCGTCGTCACCTTGGGGTATCCAGAATGTCGACGGTAGCTCCCTTGCTTCACCGGCTTCTTCGAGGTATTCGTCCTGCGGAGATTCCGAGTTCGAGAGGTATTGCAGCGCGAATTCGGGAATGGGAACGCCAAGTATGCGTAGTACAATAACAGTATTTAACGACTGCACTGATTCTGAATTTGGGTATGCGAGGAACTTTGGGTTCAGTGATGATAGCGGCCTGGAGAACTTCAGTTTGGGTGGGAGTGAGAGGAATTCACTGGATACGAATATAGTAGGCTACAGAAAGATAGAACTGTGTGATGAACTCACTAATGAAGAGCCAAGTACGAAGTATAGGTCTAGTGGGTTGAATTTGTATGGGACGGACGAGCTTATTGATTCACTTGAATCTAATGGCGAAGTTTTGTGTTGGAAGCTTGAGAGCACATCGGATTTATTATGTGGCGTAGATATGAGTAATCGATTGGAGAAGGGCGAGGGCTGGAAAGATGAAAAAGAAGGCTTCAATATAGAGAAAAAAGCCAGTGAATTGGGAACGGAGGTGGATGCTGTTCTTGGAGAAGTAACCAACGAAGCAGTTCATGTGAGCTGTTCAGAAGGAAGTACGGTTGAGAATGGCATGAAATTAGGGAAAAGGTTTGAAGAACGTCTTCTACCTTGCACGGTTGAGAAAGAGTCTGACGGTGAATTGGATATGGAAGATGATAGATTCCGGAATGAGCATTCAGAGAGTGAGGATTCAACATATAATTTTTTATCTGATGGTAATCATAAGGATGAAACTTTCTTGCATAACAATGCAAGCTTTCTCCCAGAACATAACTTGGCGAATGAAAATCCGTTGCTTATCAATTCTTCTGTAGCTTTTGGTTCCGATGATTGGAATGATTTTGAGTGTGAAACACACGGATTCTCTCTGAATTCCTTGACTGAGGACGCACTCCAAAAAAGGAAACAGCACAATCGGAATTCCTCTTCTCTGAATGTAAATGGTGATCCCATTGGTAATGAAAAGACAAGAGAAGATGGGACACAGATGCTCTTAGACTGCAAAGAGGATCAAGCTAGCACAAAATTTCCAAAAAAAGTTAACAATAGATATGGGGATTGTATCATTGTGCCAACTGTTGAAAGACCAAAGGAAATTATTCAAGTGCGGGACATTCCTGTGGCCATCTGCCAAGTCCAGTCTTTTGACGAGTTGGAGGAAATTGCAAACAGTACTTTTTTAACTGAAGCTGATTCCTCGTATGGTGTTGAGTTAGATCAAGATGCGAAGGATATATTTGTTGTTAATAATCAAGCAGGAGATGCTGATAAAACTGCATATAATAGTAAATGTCTTGTTAGTAGTAATATTACTGAAATTGGTACAGGAGCAGAGAAATTTACGTTGAAGCAGCACATGTGCCCAGTGGATGGTAACTCTGTAGAGCGACCTCAAATTCTAGAAACTGAGGATAACAGAGGAATTGTAAACCAAGGCTTAGATAGCCAAGGACTAGGAAATTTGAAAGCAAAAGTGGACCCTCTTGTTGATATTTTAACTAATCGAATTTCTACTCTTCCTAGCGATCGTTGTGAGGACATGTCGCGTTCCACTTTAACACCTGAATCAAAAGGCCATCTTTTGCCAGTTGAGTTACCAAAACTTGAGCTAAATGATTTCTATGATGAAGTTGTTCATGAAATGGAGGAAATACTGCTTGAATCTTCTGACTCTCCAGGAGCTAGATTTACTAATAGATATAAGTTATCTCAGTCACTACCATCTTTACCATTAAGAGATGGAGGATCAACTGCATCTATTTCAGGCATTAACTGTTCTGATCCAAATAACCCAGAAGACTTAAAAATTGATGGGGTTGAAGTGATAGGGGCAAGACAAAAGAGAGGGGATGTATCATTCAGTGAAAGACTAGTTGGGGTGAAGGAGTACACTGTATACAAAATTAGAGTCTGGAGTGGCAAGAAACAGTGGGAGGTTGAACGTCGCTACCGAGATTTCTATTCTCTATATTGTCGGTTGAAATCATCATTTGCTGATTGTGGCTGGAGTTTACCCTCTCCCTGGTCCTCTGTTGATAATAGATCAACAAAGTTATTTGGGAGTGCATCTCCGGATATTATTGCTGAAAGAAGTGTTTTAATTCAAGAGTGCTTATGTTCTATTCTTGATTCAAGATTTTCATCAACAAATCCAAGTCCATTAATTTTTTTTTTGTCCTCTAAAGAATCAAACTCCAGTTCTCCTACATCAGATACTGTAGTACCTCAATCACCGGCCATTTCAAGTGCATCTGACACACAAAAATTGTCCTCTTTGGGGAATTCCATATCCCTAATTGTCGAAATTCGACCATACAAATCTACAAAACAAATACTGGAGCTGCAGCATTACACGTGTGCTGGATGTTACAGACATTTTGATGATCAGAAAACTCTGATGAAAGGCTTTGTACAGAGTTTTGGATGGGGCAAACCACGACTCTGTGATTACACCTCTCAGATGTTTTGTTCTTCATGCCATACAAATGAGATGGCAGTCATACCAGCAAGAGTTTTACATCACTGGGACTTCACTCGCCACCCAGTTTCTCAGTTAGCTAAGTCGTACTTGGATTCCATACATGATCAGCCCATGCTTTGTGTCAGTGCGGTTAATCCTTCTCTCTTCTCAAAGGTCAATTAACAGAGGACTTGGATTCCGTAGATATCTTGTTGAAAGCAATGATTTTTTTGCTCTTAGAGATCTTGTTGATCTTTCCAAAGGGGCATTTGCAG 3256 40.29 MINGDGTCEGFSEVVSGDLLDSSSPWGIQNVDGSSLASPASSRYSSCGDSEFERYCSANSGMGTPSMRSTITVFNDCTDSEFGYARNFGFSDDSGLENFSLGGSERNSLDTNIVGYRKIELCDELTNEEPSTKYRSSGLNLYGTDELIDSLESNGEVLCWKLESTSDLLCGVDMSNRLEKGEGWKDEKEGFNIEKKASELGTEVDAVLGEVTNEAVHVSCSEGSTVENGMKLGKRFEERLLPCTVEKESDGELDMEDDRFRNEHSESEDSTYNFLSDGNHKDETFLHNNASFLPEHNLANENPLLINSSVAFGSDDWNDFECETHGFSLNSLTEDALQKRKQHNRNSSSLNVNGDPIGNEKTREDGTQMLLDCKEDQASTKFPKKVNNRYGDCIIVPTVERPKEIIQVRDIPVAICQVQSFDELEEIANSTFLTEADSSYGVELDQDAKDIFVVNNQAGDADKTAYNSKCLVSSNITEIGTGAEKFTLKQHMCPVDGNSVERPQILETEDNRGIVNQGLDSQGLGNLKAKVDPLVDILTNRISTLPSDRCEDMSRSTLTPESKGHLLPVELPKLELNDFYDEVVHEMEEILLESSDSPGARFTNRYKLSQSLPSLPLRDGGSTASISGINCSDPNNPEDLKIDGVEVIGARQKRGDVSFSERLVGVKEYTVYKIRVWSGKKQWEVERRYRDFYSLYCRLKSSFADCGWSLPSPWSSVDNRSTKLFGSASPDIIAERSVLIQECLCSILDSRFSSTNPSPLIFFLSSKESNSSSPTSDTVVPQSPAISSASDTQKLSSLGNSISLIVEIRPYKSTKQILELQHYTCAGCYRHFDDQKTLMKGFVQSFGWGKPRLCDYTSQMFCSSCHTNEMAVIPARVLHHWDFTRHPVSQLAKSYLDSIHDQPMLCVSAVNPSLFSKVN 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8838800 8843265 + XM_039022971.1 Bhi02g00454 26976

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00454 919 SMART DUF4206_2 852 919 IPR025258 -
Bhi02g00454 919 CDD PX_domain 657 763 - -
Bhi02g00454 919 SUPERFAMILY PX domain 663 769 IPR036871 GO:0035091
Bhi02g00454 919 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 62 918 - -
Bhi02g00454 919 MobiDBLite consensus disorder prediction 768 787 - -
Bhi02g00454 919 Pfam Putative zinc-RING and/or ribbon 852 918 IPR025258 -
Bhi02g00454 919 MobiDBLite consensus disorder prediction 338 363 - -
Bhi02g00454 919 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 62 918 - -
Bhi02g00454 919 ProSiteProfiles PX domain profile. 650 770 IPR001683 GO:0035091
Bhi02g00454 919 Pfam PX domain 676 766 IPR001683 GO:0035091
Bhi02g00454 919 Gene3D - 656 771 IPR036871 GO:0035091
Bhi02g00454 919 MobiDBLite consensus disorder prediction 247 270 - -
Bhi02g00454 919 MobiDBLite consensus disorder prediction 247 272 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00454 - - - bhj:120070994 1834.69
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00454 Bhi-Chr2:8838800 Bhi02g00455 Bhi-Chr2:8838804 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g766 . . Bda06g00607 . . . . Bma12g01042 . . Cma10g00122 Cma11g00092 Car10g00110 Car11g00084 . . Cpe04g01562 Bhi02g00454 Tan09g2254 . . . . . Cla06g01666 Cam06g1851 Cec06g1903 Cco06g1908 Clacu06g1810 Cmu06g1751 Cre06g2570 Cone2ag0913 Cone16ag0095 . . . . . . . Blo15g00264 . . Bpe07g00845 . . . . Cmo10g00126 Cmo11g00091 . . . . . Cpe18g00847 . . . . . . . . . . . . . . Lsi06g01558 Csa01g00145 Chy02g02584 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006562 2 2 1 1 1 1 2 1 1 1 1 1 2 1 0 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00454 Bhi_Chr02 FPKM 9.958333 12.755703 8.952291 10.591698 1.001587 1.304705 1.199353 18.55302 17.592638 17.040398