Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00478 TAATCACAGGCACTGCAAAGGCAAAACAAAAACTCGTCGTCCATCCTCGAACTCCTCTGCTCTCTTCCCTTTCCGCCCGTTCATTCCATATATTATTATTGCTCCGATCGCAGGCCCATCACTCTGGACTTCTTGTTTTTCATTTGCCGAGATCTCCTCGCCGGAACCCTCATCGCGATCTTCCACCGATTCTGAGGTTCCGATTGCTTGTTTTCTTTCCCCCTCCGTTTCTCTCTTCCATTTCTGAAATATCGACCAGCTACTTCCGCCCCCATTTCTTCTCTAGGTTTTGCACGGAGCATTTGAACCCTATTTCATCTCAGGTTGTATTAAATTTGGTTGAATGACCTTGCTACAACTGTTCAATCATGACATCAAGTATGTTGAGTGGAGAAAGAAGGTGGACATCAGCCAGACGAGGCGGGATGACTGTTTTAGGAAAGGTTGCTGTTCCAAAACCTATAAACTTACCCAGTCAAAGGTTAGAAAACCATGGTTTGGATCCAAATGTGGAAATTGTACCCAAGGGTACCCTCAGTTGGGGCAATAAATCAACTTCATCTGCAACAAATGCATGGGGTTCCTCATCTGTTTCTCCAAATACAGATAGTGCTTCTGGTTCACCAAGCCATCTCTGTGGCCGCCCTTCATCTGCTGGAGGTGGCACTCGTCCATCAACAGCTGGCAGTGACAGGTCCCATGAACCTCATGCTAATGCATGGGGACCAAGTTCTAGACCATCATCTGCCTCTGGGCCTGTGACGTTAAGCGGCCATGCATCACTCACATCCCTGCGCCCTCACAGTGCCGAAACTAAATCCAGTAGCTCACAATTGTCACGTTTTGCAGAGACTTCAGAAAATCCAGGGGCTTGGAATTCTGCTTTGACTACAGAGAAAGTGGGAATGATGCCATGTAAGAGTGATGGGTTTTCTTTGACATCTGGAGACTTTCCTACGCTGGGTTCAGAGAAAGAATGTGTAGGAAAGGATGCTGAGTCACAAGATAATAGGTCTAATGGGGGAGCTACAATGAAAGAGGGGACTGGAACTTCGGCAATTGATGATCCTGAAAATGTGAATACAAGTGTTGCAAGTGCTAATTCCTGGAGAAATGATAATCTTCCACACAACGATGATGGATCTAGGCCAAATGTAGAGAAATGGTTGGGGCATCCCCAACCTTACCCTGGTGCAAATATTCCTCCCCCACATTATGATGCCTGGCATGGTAATCCAGTAAACAATCCTCAAGGGGGTGTATGGTATAGAGGTCCTCCACAAGGAGGTCCTCCATATAGGACGCCAGTTGCTCCTGGTAATTTTCCTATGGATCCATTTCTGTATTATCCTCCACAGATTCCCCCTGGTGGTCTTCCCAATCCCCAGCCTCCTCATGGAACTGGACCCAGGGGACTCCATCCTAAAACTGGAGATATATACAGACCTCCTATGCATGATGGTTTTATTCACCCAGGCATGTCAATTAGACCTGGATTTTACCCAGGTCCAGTCACCTATGACGGATATTATCGACCTCCCATGGGCTACTGCAATTCTAACGATAGAGATGCTCCATTTATGGGAATGCCTGCTGGGCCTGCTGGGCCTGCTGTTTACAACAGGTTCTTGGGCCAAGGCCAGAGTGCCTCTGACCCTGCAAGTTCCCACGGCTTATCTAGTGGAAAGGGTATGGTTCCTGAACAAGTAGAATCTAGTCTTCCTTGTGATAATCAAGGACCGTACAAGGTTCTTCTGAAGCAGCAGGGAAACATAAATGGTAAGAACGAAGAAAAAGATAGGATAAACTCAACAACCACTAATCAGTTGATTCTTGAGAAGGCTGACCAACAGAGGGTGTCTCCATTTGAGAATGACTGGGATCATAAAAAGGAAGTTGATTTGAGAAGGAGAAAATTGGGGGTGGAACCGTATTCTCAGTCTTCTGCCAACCAAGATGCTCAATCTTCTGAAAGTATGAAAACCAAGTCTCATGGAAACTCAAGGACTGGTGATGGTTTACTAGAAAAAGTGGATGCTCCTGCTTCTGGCTTCTCTGAAGTTCCCAAATCACTGGCTACTTCCACAAAAGATTCAAGTCTGATTCAGAAGATAGAAGGATTAAATGCAAAAGCACGGGCTTCTGACGTGCGACATGATGCTGCACCTATCTGTGGCAGGGAGGAGCCAGATGAGTTTCAATCTGATGATAAGCACTCTGATCATTTTGTTGCCCATGAAGTGGTTGTGAGTGCTGTTTTTCCTGAAAACAGAGATTTTAATGAAGTCCTAGACCCTGCCTCCAGTGAATTAACCATGTCAACTGTAGATAGGAACGTTAAGTTACACAGTGGAGCACCCACCCACAGGAGGCCTAATCGTGGAATGCAAGGGAGAAGTGATCATCATGGCCGAGGAAAAGTCAATGCACAGGAGGTTGATGGGTGGCATAAAAGACCTCTGTTGGACTCCCCAGGCATGATGGCAACTCCCAACCAGGAAAGTTCGGTGCTTGCAAGAGATCGCAATGCTTTAGGAGCTATACATAAGGCCAAGCCATTTTCTTCAGATAGCCATGGAGATGGACCTGCCCCATCCATAGGTGATTCAAATGATAGCCAAGCTCAGCGTACAAAGATGAGAGAGTTAGCAAAACAACGCACCAAACAATTGCAGGAGGAAGAGGAGGAAAGGACTAGAAAACAGAGGGCTAGGGCCTTGGCGAAACTTGAAGAGTTGAACAGACGTACAGTAGCTGGGGAGGGGCCAAATCAGTCGTTTGAAACTGATAATGATGCTATAAGAAATAAGATGGAAGAACCGAATTCGAGAACACTTGGTACCATATCTGGAGAGCACACCACAGTTTCTGATCTACATGTGGCTACTAATGATAGCGAGTCAACTTTGTGCACTAATAAAAATTCTCCCATTGTATCAGGAGATACATCATTGAAGAAACCAAATAGTGGCAATAAGGAACAGGTTGTGGCACATAATGAATTGAGATCTTTGGAGCAGGAGGTAAGTATTTCTGATGCAGCTCAAAGTAAGAATGCTTCTGAGGTGAATGGGGGTGGTGCATCCTTGAAGCACAAGCGTACAGGAAAACAAAAACCAAATATTCCATCTGAAAAGACTGAAAAGATTCCCCATTTAATTAAGGAATCGAAAGGTCAGATAGTCGTAGCTGAGATTCAAACAGTTGTAGAGGAGTCGAGCAATATCATTACAGATCCTGTTGCTGAATCTTCAACACATGCAAGAAAGAAAAATAACAAAAGTGGGAAGAACAGGCACAAAGTGGAAGAGGCCTTGTTATCTGCATCATCACCTCAGATTTCAAAAGAAGCAATGCTTACAACGGAATATGATAAACCAAGGGCTTCTCAATCTGTAATGGATCCTCCCTCAGATCCACAACCGCCAGATGAAAATCAGTTTAGAGAGCAGCAACCTCTGTTGCCAGTTGTAGAGACCCTTGGCAAAGGTAACGGTCAGTGGAAGTCTCAGCATTCTCGCAGGATGCCAAGAAATGCTCAAAATAGACCAGGAGAAAAGATCCATGGCAGTGATTCGGTTATCTGGGCCCCTGTGAGATCTCTCAACAAATGTGAGGTTACCGATGAAACTATTCAGAAGAACGAAGCAGAGTCTGTTGCTTCATCTGTGAAGATTGATAATCAAGTGCAGAATATTCCAAAAAATAAGCGAGCTGAAAGGGAGATATATGTACCGAAGCCAGTAGCCAAAGAATTGGCACAGCAAGGAACCATCCATCAAGATATTTCCCCTATGAACCAGGCACCAGATGATAATAAGGCAGATTCGAGTTCTCAAAGTTCTGATAATACTAGATCTGCTGGTGCTGTTTCTGGCAATGTGGGATTTTCCACAGATCATAGAAACGGGGATGGTAGGCACCATAAACAAAGCAAGGCACATGCATCGTGGCAGCAACGGGGGTCAACAGAATACGGGCAAGGCTTACAAGATCAGTCATCTTATGTTTCAAATGCCGGTAGTCATGTTCAAAAAACAGTTGAATATCAATTACCTGAGAAGGCCACTGGAAGCTCCACCAATGAGTTCGTGAGTCAGATTGATGAGTGGGATCCACCTGAAGGATGGAATGATCCCAACTACTCAGCCTCTATCCCACCTGTCACTGTGGCTGTTGGAAGAGACCAGGGAGTGACAGGCAGGGGAAAACGATCCCAATCGAAGGGGCACAAGGGTATCAGTAACAATTATGATCTCAATGAAAAGAAATTTAGAAGCGGGGACAATGAAAAAATTTCTTCCGACTCCGAAGTGCTCGAGGCAGATCAAAAAGATGTATCTGCTGCTGCCAAAGAGAATTGGGGTGTTGGGGAACGTTCAACATCTCATTGGCAACCCAAAGCACGGATGGTACAACAACCTCACAATTATCAAAATGTTGATGCTGAAGCTGCACAGACTAATAAAATGGGACCTAGACTAACCTCACATCGCATAAAAACGAGTGATGATGTGGCCCAAAACCAGTATGATACATCGACTGGTGCAAGAACCATCACAGAAGAGGGATCAAATGTTGGTCATCATGGGGCCAGGGGAGAGAAGAAAATTTCTTCCCGCAAGGAGCGTCCCTACTCCCCAAACCAAGGTCCTATCCGTACAGTGGATGTTGCTCCAGCAAATACAGATGTCAGACGGGAGCAACAGTTGCCTACATTTTACCATAAAGGCGGTGAGAACAATAACCGTTATGGAAGAGGGTCAGAATCTCGTCGGGAAAGGAATACCTCTCAACATCATAAGCAGCATCATCATCCACCTGCTAATAGAGACAGGCAAAGACAAAATCTGCAGTACGAATATCAACCAGTTGGGTCACACAATAGTAAACCAAACAACGATAGACCTAAGGATACGACTCAACATTCAAGCTCAAGGTACGTGGAGAGGGGCCAAGGTCAGTCCAGAAGAGATGGTGGGAACTTCTACAAACAACAAGGTGGACCAGTTTGATTAGATGCCTGTCATATTTAGCATAATTTGGAGATTTCAAATACATTTTCTTTATTTGGCCCGCGCCACCTCAGTTTATACATAGCAGGTCGATCTTCTATGGATCAGGTTCTTGAGAAATATTACTTTTCCAGTTCGTTTTTTTTTTTCCTTATCGATTTCCTTTTGGCGAAGTCTAATATTTTCTAAAGCTTAACAGCTGATGGTGTGGAACTGCTTTGAGCAGGGCAGTAGGATTAGGAACCAGATTTGACGTTGCAGGAGAAACTCTTTGGAGTTGGATGGAGGAGATTGCTCGGACTTGTTTATTTTGTAGGTTACTCTGAAGATATGAACAGTTTTAATTTGTGCTTACAAGTTTCATGCATGTTGGGACGGACCCTTCACATATTTGTTCTCTTTTTCTTTTTCCTTCGCCATCCCCACTCCTCTTTAGCTTTGTATGTATGACATTTCTTTATTTCCTTCACATGTTGAACCACTGAAGAAATGAATTAGAGAAGCATTCTGATTCTTCGCTACTAA 5540 44.6 MTSSMLSGERRWTSARRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGNKSTSSATNAWGSSSVSPNTDSASGSPSHLCGRPSSAGGGTRPSTAGSDRSHEPHANAWGPSSRPSSASGPVTLSGHASLTSLRPHSAETKSSSSQLSRFAETSENPGAWNSALTTEKVGMMPCKSDGFSLTSGDFPTLGSEKECVGKDAESQDNRSNGGATMKEGTGTSAIDDPENVNTSVASANSWRNDNLPHNDDGSRPNVEKWLGHPQPYPGANIPPPHYDAWHGNPVNNPQGGVWYRGPPQGGPPYRTPVAPGNFPMDPFLYYPPQIPPGGLPNPQPPHGTGPRGLHPKTGDIYRPPMHDGFIHPGMSIRPGFYPGPVTYDGYYRPPMGYCNSNDRDAPFMGMPAGPAGPAVYNRFLGQGQSASDPASSHGLSSGKGMVPEQVESSLPCDNQGPYKVLLKQQGNINGKNEEKDRINSTTTNQLILEKADQQRVSPFENDWDHKKEVDLRRRKLGVEPYSQSSANQDAQSSESMKTKSHGNSRTGDGLLEKVDAPASGFSEVPKSLATSTKDSSLIQKIEGLNAKARASDVRHDAAPICGREEPDEFQSDDKHSDHFVAHEVVVSAVFPENRDFNEVLDPASSELTMSTVDRNVKLHSGAPTHRRPNRGMQGRSDHHGRGKVNAQEVDGWHKRPLLDSPGMMATPNQESSVLARDRNALGAIHKAKPFSSDSHGDGPAPSIGDSNDSQAQRTKMRELAKQRTKQLQEEEEERTRKQRARALAKLEELNRRTVAGEGPNQSFETDNDAIRNKMEEPNSRTLGTISGEHTTVSDLHVATNDSESTLCTNKNSPIVSGDTSLKKPNSGNKEQVVAHNELRSLEQEVSISDAAQSKNASEVNGGGASLKHKRTGKQKPNIPSEKTEKIPHLIKESKGQIVVAEIQTVVEESSNIITDPVAESSTHARKKNNKSGKNRHKVEEALLSASSPQISKEAMLTTEYDKPRASQSVMDPPSDPQPPDENQFREQQPLLPVVETLGKGNGQWKSQHSRRMPRNAQNRPGEKIHGSDSVIWAPVRSLNKCEVTDETIQKNEAESVASSVKIDNQVQNIPKNKRAEREIYVPKPVAKELAQQGTIHQDISPMNQAPDDNKADSSSQSSDNTRSAGAVSGNVGFSTDHRNGDGRHHKQSKAHASWQQRGSTEYGQGLQDQSSYVSNAGSHVQKTVEYQLPEKATGSSTNEFVSQIDEWDPPEGWNDPNYSASIPPVTVAVGRDQGVTGRGKRSQSKGHKGISNNYDLNEKKFRSGDNEKISSDSEVLEADQKDVSAAAKENWGVGERSTSHWQPKARMVQQPHNYQNVDAEAAQTNKMGPRLTSHRIKTSDDVAQNQYDTSTGARTITEEGSNVGHHGARGEKKISSRKERPYSPNQGPIRTVDVAPANTDVRREQQLPTFYHKGGENNNRYGRGSESRRERNTSQHHKQHHHPPANRDRQRQNLQYEYQPVGSHNSKPNNDRPKDTTQHSSSRYVERGQGQSRRDGGNFYKQQGGPV 1548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9231394 9241052 - XM_039023705.1 Bhi02g00478 27000

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1364 1548 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 521 546 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 890 927 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1405 1420 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1140 1344 - -
Bhi02g00478 1548 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1543 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 56 90 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 54 170 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 957 977 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 660 713 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 231 252 - -
Bhi02g00478 1548 Pfam BAT2 N-terminus 13 138 IPR009738 -
Bhi02g00478 1548 Coils Coil 754 793 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1364 1399 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 421 435 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1001 1025 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1041 1055 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1040 1066 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1293 1325 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 333 354 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1490 1508 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 752 781 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 671 696 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 201 273 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1193 1244 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 119 170 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 727 781 - -
Bhi02g00478 1548 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1543 IPR038808 -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 421 458 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 518 553 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 1140 1176 - -
Bhi02g00478 1548 MobiDBLite consensus disorder prediction 849 870 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00478 - - - csv:101207575 2705.24
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g781 . . . . . . . . . . Cma10g00119 Cma11g00088 Car10g00106 Car11g00079 Sed08g0103 . Cpe04g01566 Bhi02g00478 Tan09g2266 Cmetu02g1512 . Hepe09g0213 . . Cla06g01673 Cam06g1861 Cec06g1911 Cco06g1916 Clacu06g1817 Cmu06g1758 Cre06g2575 . . . . . . . . . Blo15g00262 . . Bpe07g00848 . . . . Cmo10g00123 Cmo11g00088 . . . . . Cpe18g00849 . . . . . . . . . . . . . . Lsi06g01564 Csa01g00136 Chy02g02591 Cme02g01988
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006102 0 1 1 0 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi02g00478 Bhi_Chr02 FPKM 23.674122 23.247389 18.65489 20.900969 28.723022 24.547663 27.804146 27.482403 28.860615 29.456364