Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00494 TGGAAGAAAGGTTCCAAAATACAATGGAGGAGCGCGAGACACAGTTCGGTTCCGAGGAATTGCAGGACAGTACTTGCCCGTTCGTGTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTGGATTTTATCACGATCCTGCTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAATCTATGTGCTTCTTCAGTCGAACGAGGGTGAAGAATGCAAGACGTATCTTGATAATCCTGTTAAAGGCGATTCATCTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTTATTTGAGGCCACTGAAATTGACACTTCTAAATGCAAAGGAAGTGATGACGACGGGCTACCATTAGGAGAAAAAGTGGAGGGTGTTGATGTTCATGACCACGAGAATCCTCCCACATCTTTATGGTTAGAAGATACGCTTATTGATCTTTTTTTGTCCGGCTATTCCAATTCAGAAGTCATAACCACTAATGACAGCATATCTCCCACATCATCAAGAACTAATGATGCTAATAACTTTCAGTCATCAAGTGATGGCTATGGCGATACTCATAGGATGGAAGGTGAATGGTTCCAAGATGAAAGTCATGAAATCTTGAATTCTAGCGAACAAGTATTAGATGGAGGCTATGATGATCCTCTGAATATGGAAGGTGAATGGTTCCAAGAAGAAAATCATACCATATTGAATCCAAACGAAAGTGTATCAGATGGAGGTGTGTCCACGGATGAAGATAACTGGAAGGCCCAGTATGGTCAAGTCACTGATTATGTGGAAGCAATTCCCAAGCTCTCTGTTGTGGATATCTGGGACTGGTCGACGGTTTTAGAGTCCAGGACAGGGGGAAAGGGGAGGGTTATGAGGTTGGTTGGAAGACTGGTGAGGAAGTCTGGGAAGCTTCATCCTTCGTTGTCTTCAAATGGTGCTCTTTTTAAAACGGCTCCAATATGTGAAGTACATTTAGATTTGGTTCGAGTTACAACCGGGAGAATCTACAAGTTACATAGTCCTAGTAAGAAGTGTTTGGCGACCATGTCAACTTTTAATTCATCCAACCCTACAAAAGATTGGGGTTTCCCCGATTTATTGGATAGGCCAATTGATCTTGTTAATAACGAAGTAAAAGTTGGAAGCACAGCCATTGTTAGCATGGCTGCGACTGGAAAGTCTCAGTGTTCAAACCAAAATCATTATAGAGATAGAGCGGCTGAGAGAAGAATCCTTCATGGTGGTTTCGGGGTTGGTCCTGGGCAGAAGAATTCAGCTATCGGTCATGGCAATTTTACATCATCATCCTCTTATGGCTATTCGGAGAGCACTGCAGCTGAAGCCTCTAATATTTCATTTGGAGCTGGTAGTCGTGGGCGAAAAATCTTGAAAAGCATGGGCTGGAAAGAGGGAGAGGGTCTTGGCAACAGCACGAAGGGCATGGTGGAACCACTTCAAGCTTTTGGAAACGTAGGAAATGCTGGATTAGGCTGGCCTCGGGGAATTAAAAAACTCGACATCAACTTCTCAATATAATCGAAAAGATGTCAAGGGACGTTTCTCCAGGTGTGTGATCCGAGTGAAGAAGCACAAAATTTGAATCGCAAGTCTCATTTAGCTTTGCATCCCATCCCACCCCTTTAGGTATGGTAAATGGTTCCTGTGTAGATTGTAGGGAAGGTTTTTGTCGACCTGCAGACTATATAAGCCTGGCCTGATTCCTATAAA 1748 43.36 MEERETQFGSEELQDSTCPFVWDENSQLYFHSSGFYHDPAAGWYYSSRDGSYYKFENGIYVLLQSNEGEECKTYLDNPVKGDSSSQVCNTGSEDHSLFEATEIDTSKCKGSDDDGLPLGEKVEGVDVHDHENPPTSLWLEDTLIDLFLSGYSNSEVITTNDSISPTSSRTNDANNFQSSSDGYGDTHRMEGEWFQDESHEILNSSEQVLDGGYDDPLNMEGEWFQEENHTILNPNESVSDGGVSTDEDNWKAQYGQVTDYVEAIPKLSVVDIWDWSTVLESRTGGKGRVMRLVGRLVRKSGKLHPSLSSNGALFKTAPICEVHLDLVRVTTGRIYKLHSPSKKCLATMSTFNSSNPTKDWGFPDLLDRPIDLVNNEVKVGSTAIVSMAATGKSQCSNQNHYRDRAAERRILHGGFGVGPGQKNSAIGHGNFTSSSSYGYSESTAAEASNISFGAGSRGRKILKSMGWKEGEGLGNSTKGMVEPLQAFGNVGNAGLGWPRGIKKLDINFSI 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9537896 9543165 - XM_039023030.1 Bhi02g00494 27016

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00494 510 Pfam OCRE domain 18 56 IPR041591 -
Bhi02g00494 510 CDD OCRE 20 58 - -
Bhi02g00494 510 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 11 498 - -
Bhi02g00494 510 SMART G-patch_5 452 498 IPR000467 GO:0003676
Bhi02g00494 510 PANTHER RNA-BINDING PROTEIN 11 498 - -
Bhi02g00494 510 MobiDBLite consensus disorder prediction 158 184 - -
Bhi02g00494 510 Pfam G-patch domain 456 496 IPR000467 GO:0003676
Bhi02g00494 510 MobiDBLite consensus disorder prediction 158 188 - -
Bhi02g00494 510 ProSiteProfiles G-patch domain profile. 454 500 IPR000467 GO:0003676
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00494 - - - csv:101205178 795.423
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00494 Bhi-Chr2:9537896 Bhi02g00496 Bhi-Chr2:9537896 0 dispersed
Bhi02g00493 Bhi-Chr2:9537896 Bhi02g00494 Bhi-Chr2:9537896 0 tandem
Bhi02g00494 Bhi-Chr2:9537896 Bhi02g00495 Bhi-Chr2:9537896 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g797 . . . . . . . . . . Cma10g00109 . Car10g00098 . Sed12g2460 . . Bhi02g00494 Tan09g2285 Cmetu02g1933 . Hepe09g0222 . . Cla06g01684 Cam06g1871 Cec06g1920 Cco06g1925 Clacu06g1826 Cmu06g1769 Cre06g2585 . . Cone13ag0159 . . . . . . Blo15g00259 . . Bpe07g00853 . . . . Cmo10g00113 . . . . . . Cpe18g00856 . . . . . . . . . . . . . . Lsi06g01577 Csa01g00126 Chy02g02600 Cme02g01997
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008649 0 3 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 31