Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi02g00500 CTCTCTTTAATTTCTCTCTCTCTTTTTCTTCTTTTTCCAATTAGGGTTTTGCTTCACCTTCTTCTTCTTCTTCTTCTTCTTCAGATCAGCCCTAAACCAATTCTCATAAATTTTTTAGTTTATCAAAAGGAAAGGAACAAAGGGGGCTTAAAGCTAAGCTTTCTCACTTGAAAGGGCAAAGGATGGCATCATCAAGTTCTTACAATTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCAGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAAAAATTTGCCAATGTGCACAAAATCTTTGGGGCCAGCAATGTAACAAAGCTACTAAATGAGCTTCTACCTCACCAAAGAGAGGATGCAGTTAACTCTCTTGCCTATGAGGCTGAGGCCCGAGTCCGGGACCCGGTCTACGGTTGCGTTGGAGCCATCTCCTTCCTTCAAAGGCAAGTCCAGAGGCTCCAAAAGGAACTCGACGCTGCGAATGCCGACCTAATTCGGTTCGCATGCAACGAGATACCTAATGCAGGAGTCAATCAAGTGGTTCAGCCCAACCTCGGCGCTCGCCCGAGAGCGTTAGATCAGTATCACACAAGTTCTTCATCAACAAGTGGATATTATAATCAACATCTTCCTGCTTTTCCCATGGCGTATTCATTGCCTTGGAATGAAAACTCTTCTGGAAATAACATCAATGAAGGAGGAGGAGATGCCAATATTTGAAGAAAACTTTCCCAAAAACAAATAAAAAATCCTCAAAATAGGGTTTTTTCCCCCCTCCAACCCTAGAGAGAAAATTTTCTCTCTTCTCTGGTATGTCACTTCCTCATATATTTATATATATATGATGGTTTTTTCTAGCTAGATGAATTAGTTAATTTTTCTAGTATTATTTAGAGGGTGATCTATGGGATTTAGGTTATCTTAAACCCCATTTAGCATTTTAATTTCCATTTAAAATCCAAAACAATTTCCATGAGAGTTATGTATTTTTTTTCCTTTTTTTTTTAAAAAAAAAAATTTATGATCATGTGTGGAAGATTAATTTAGGGCCTAAAATAAGGTTGCTATGCATAGACTATTGTCTATTGTGTGAGGTTCAATTTCTAGAGAGCTGCTTTTAGCTTCTTCTTTTTCTTTTTTTTTCCCTTTTTTTGTTTGTATCAAGAATTTTAGTGCTGCCATTGTTTATG 1210 38.02 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIPNAGVNQVVQPNLGARPRALDQYHTSSSSTSGYYNQHLPAFPMAYSLPWNENSSGNNINEGGGDANI 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 9678665 9681314 - XM_039024158.1 Bhi02g00500 27022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi02g00500 185 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bhi02g00500 185 PANTHER ELONGATED PETIOLULE 1 1 182 - -
Bhi02g00500 185 Coils Coil 89 116 - -
Bhi02g00500 185 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bhi02g00500 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 182 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00500 Bhi08g01650 CCT
Bhi02g00500 Bhi08g01650 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00500 Bhi-Chr2:9678665 Bhi11g01604 Bhi-Chr11:46239538 4.70E-73 dispersed
Bhi03g00118 Bhi-Chr3:3150916 Bhi02g00500 Bhi-Chr2:9678665 4.87E-44 transposed
Bhi06g00446 Bhi-Chr6:9802568 Bhi02g00500 Bhi-Chr2:9678665 8.08E-28 transposed
Bhi09g00376 Bhi-Chr9:7797823 Bhi02g00500 Bhi-Chr2:9678665 6.60E-29 transposed
Bhi02g00500 Bhi-Chr2:9678665 Bhi08g01650 Bhi-Chr8:46580059 4.11E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
386 PF03195 LOB 2.80E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi02g00500 - - cmos:111430134 330.487